Name: Stenotrophomonas maltophilia JCM 1976
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162602

Type strain:

Species: Stenotrophomonas maltophilia

Culture col. no.: JCM 1976, ATCC 17806, BCRC 12495, IAM 1554, IFO 12692, LMG 959, NBRC 12692

Strain history: K. Suzuki KS 0002 <-- IAM 1554 <-- K. Komagata YF-3.

NCBI tax ID(s): 40324 (species)

SI-ID 6102

LMG 959, ATCC 17806, IAM 1554, IFO 12692, JCM 1976, CCRC 12495, NBRC 12692, BCRC 12495

Special Collections

Other strains from Stenotrophomonas maltophilia

Section

Stenotrophomonas maltophilia JCM 1976 is a bacterium that was isolated from Japanese paddy.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Lysobacterales*
	Family	*Lysobacteraceae*
	Genus	*Stenotrophomonas*
	Species	**Stenotrophomonas maltophilia**
	Full Scientific Name (LPSN)	Stenotrophomonas maltophilia (Hugh 1981 ex Hugh and Ryschenkow 1961) Palleroni and Bradbury 1993

	Synonym	Xanthomonas maltophilia
	Synonym	Pseudomonas maltophilia
	Synonym	Stenotrophomonas africana

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Japanese paddy
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence LC379123 (>99% sequence identity) for Stenotrophomonas from Microbeatlas

Aquatic Samples	1647
Soil Samples	1650
Animal Samples	6387
Plant Samples	767
Total Samples	10451

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Stenotrophomonas maltophilia gene for 16S rRNA, partial sequence, strain: JCM 1976	LC379123	1469	GenBank ENA	40324 tax ID
[Ref.: #124043]	Stenotrophomonas maltophilia gene for 16S rRNA, partial sequence, strain: NBRC 12692.	AB680321	1472	GenBank ENA	40324 tax ID	*
[Ref.: #124043]	Stenotrophomonas maltophilia strain BCRC 12495 16S-23S ribosomal RNA intergenic spacer, complete sequence.	EU014540	497	GenBank ENA	40324 tax ID	*
[Ref.: #124043]	Stenotrophomonas maltophilia gene for 16S ribosomal RNA, partial sequence, strain: JCM 1976.	AB294554	1541	GenBank ENA	40324 tax ID	*

[Ref.: #67770]

GC-content

66.9 mol%

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 1976, ATCC 17806, BCRC 12495, IAM 1554, IFO 12692, LMG 959, NBRC 12692

[Ref.: #113501]

SI-ID 6102

Literature:

Topic	Title	Authors	Journal	DOI	Year
Metabolism	Continuous 2-Keto-L-gulonic acid fermentation by mixed culture of Ketogulonicigenium vulgare DSM 4025 and Bacillus megaterium or Xanthomonas maltophilia.	Takagi Y, Sugisawa T, Hoshino T	Appl Microbiol Biotechnol	10.1007/s00253-009-2312-1	2009	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#113501

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID6102.1 )

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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