Clostridium sporogenes (CCUG 47475)

Name: Clostridium sporogenes (CCUG 47475)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 152722

Type strain

Culture col. no. CCUG 47475

NCBI tax ID(s) 1509

Special Collections CCUG

Links

Clostridium sporogenes CCUG 47475 is an anaerobe bacterium that was isolated from Human vaginal secretion,82-yr-old patient.

anaerobe Bacteria

Name and taxonomic classification

SI-ID 111054

CCUG 47475

@ref 20215

Last LPSN update 2026-05-29 08:42:39

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Clostridiaceae

Genus Clostridium

Species Clostridium sporogenes

Full scientific name Clostridium sporogenes (Metchnikoff 1908) Bergey et al. 1923 (Approved Lists 1980)

Synonyms (1)

"Bacillus sporogenes"

BacDive ID	Other strains from **Clostridium sporogenes** (25)	Type strain
2710	C. sporogenes McClung 2004, 388, DSM 795, ATCC 3584, IFO ... (type strain)
130932	C. sporogenes 2PG-426-CC-2, DSM 29422
2707	C. sporogenes W28delta, DSM 633
2708	C. sporogenes H6j, DSM 634
2709	C. sporogenes McClung 2003, 3679, Cameron's putrefactive ...
2711	C. sporogenes McClung 2006, 2006, DSM 1446, ATCC 11437, ...
2712	C. sporogenes SR 5, SR5, DSM 1664, ATCC 19404, CIP 79.3, ...
2714	C. sporogenes DSM 46278, IMET 10860, SG 272
2715	C. sporogenes 15Rga, DSM 46279, IMET 10863
134401	C. sporogenes AU297, CIP 108177
136740	C. sporogenes GO 1, CIP 60.53
137136	C. sporogenes AU298, CIP 108178
138778	C. sporogenes 51, CIP 79.39
141391	C. sporogenes CCUG 1388
142431	C. sporogenes CCUG 12462
151851	C. sporogenes CCUG 45049
152930	C. sporogenes CCUG 48045
153019	C. sporogenes CCUG 48328
154094	C. sporogenes CCUG 52331
156952	C. sporogenes CCUG 67315
165625	C. sporogenes JCM 7831, ATCC 6015, IAM 19003, NCTC 6084
165628	C. sporogenes JCM 7835, IAM 19004
165629	C. sporogenes JCM 7836, IAM 19016
165634	C. sporogenes JCM 7841, IAM 19005
165635	C. sporogenes JCM 7849, IAM 19234

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
57707	positive	growth	37

Physiology and metabolism

Oxygen tolerance

57707

Oxygen toleranceanaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	+	hydrolysis	from API rID32A
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68380	alanine arylamidase	-	3.4.11.2	from API rID32A
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68380	alkaline phosphatase	-	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68380	alpha-glucosidase	-	3.2.1.20	from API rID32A
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68380	arginine dihydrolase	+	3.5.3.6	from API rID32A
68382	beta-galactosidase	-	3.2.1.23	from API zym
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68382	beta-glucosidase	-	3.2.1.21	from API zym
68380	beta-glucosidase	+	3.2.1.21	from API rID32A
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68382	cystine arylamidase	-	3.4.11.3	from API zym
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	-		from API rID32A
68380	histidine arylamidase	-		from API rID32A
68380	L-arginine arylamidase	-		from API rID32A
68382	leucine arylamidase	-	3.4.11.1	from API zym
68380	leucine arylamidase	-	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	-	3.4.11.1	from API rID32A
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	+	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	-	3.4.19.3	from API rID32A
68380	serine arylamidase	-		from API rID32A
68382	trypsin	+	3.4.21.4	from API zym
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

57707

Fatty acid	Percentage	ECL
C16:0	18.1	16
unknown 9.730	17.1	9.73
C14:0	12.7	14
C18:1 ω9c	9.6	17.769
C18:0	4.3	18
C18:1 ω9c DMA	4.3	18.226
C18:2 ω6,9c/C18:0 ANTE	3.7	17.724
C16:0 iso	2.9	15.626
C19:0 CYCLO ω9c	2.7	18.87
C16:1 ω7c	2.6	15.819
unknown 18.177	2.4	18.177
C15:0	2	15
C14:0 ISO	1.9	13.618
C18:1 ω7c /12t/9t	1.9	17.824
C16:1 ω7c DMA	1.7	16.288
C17:1 ω9c	1.6	16.773
C13:0 ISO 3OH	1.5	14.11
C16:1 ω5c	1.4	15.908
C13:0 3OH/C15:1 i I/H	1.3	14.469
Unidentified	1.3	16.084
C17:1 ω5c ISO	1	16.461
Unidentified	0.9	14.773
C17:0 anteiso	0.9	16.722
Unidentified	0.9	9.142
Unidentified	0.7	12.543
C13:1 at 12-13	0.6	12.931

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
57707	-	-	+	-	-	-	-	-	+	-	+	+	-	-	-	-	-	-	-	-

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
57707	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body-Site	#Urogenital tract	#Vagina
#Infection	#Disease	-
#Infection	#Patient	-

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
57707	Human vaginal secretion,82-yr-old patient	Homo sapiens	2003-02-27	Göteborg	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#57707	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 47475
#68380	Automatically annotated from API rID32A .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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