Name: Acidovorax sp. Leaf191
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 131590

Type strain:

Species: Acidovorax sp.

Strain Designation: Leaf191

Culture col. no.: DSM 102564

Strain history: <- J. A. Vorholt, Institute of Microbiology, ETH Zurich, Switzerland; Leaf191 <- D. B. Müller, E. Potthoff and M. Remus-Emsermann

NCBI tax ID(s): 1872122 (species)

SI-ID 404080

DSM 102564

Special Collections

Other strains from Acidovorax sp.

Section

Acidovorax sp. Leaf191 is a Gram-negative bacterium that was isolated from leaf of Arabidopsis thaliana .

Gram-negative
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Betaproteobacteria*
	Order	*Burkholderiales*
	Family	*Comamonadaceae*
	Genus	*Acidovorax*
	Full Scientific Name (LPSN)	Acidovorax Willems et al. 1990

	Synonym	Paenacidovorax
	Synonym	Paracidovorax

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %98

Information on culture and growth conditions Culture and growth conditions

[Ref.: #23386]

Culture medium

NUTRIENT AGAR (DSMZ Medium 1)

[Ref.: #23386]

Culture medium growth

[Ref.: #23386]

Culture medium link

Medium recipe at MediaDive

[Ref.: #23386]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #23386]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %90.753

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #23386]	Sample type/isolated from	leaf of Arabidopsis thaliana (wild-type)
[Ref.: #23386]	Host species	Arabidopsis thaliana
[Ref.: #23386]	Geographic location (country and/or sea, region)	Brugg (47.4816806N 8.217547222E)
[Ref.: #23386]	Country	Switzerland
[Ref.: #23386]	Country ISO 3 Code	CHE
[Ref.: #23386]	Continent	Europe
[Ref.: #23386]	Geographic location	47.4817°/8.2176°
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Leaf (Phyllosphere)

What are isolation sources categories?

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Acidovorax sp. Leaf191	GCA_001424425	scaffold	GenBank ENA	1736296 tax ID	*
[Ref.: #66792]	Acidovorax sp. Leaf191	1736296.3	wgs	PATRIC	1736296 tax ID	*
[Ref.: #66792]	Acidovorax sp. Leaf191	2643221925	draft	JGI IMG/M	1736296 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Acidovorax sp. Leaf191 Leaf191 NCBI: GCA_001424425.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	98	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.896	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	89.364	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	90.753	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97.991	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	84.268	no

Availability in culture collections External links

[Ref.: #23386]

Culture collection no.

DSM 102564

[Ref.: #89996]

SI-ID 404080

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#23386

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 102564

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#89996

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404080.1 )

* These data were automatically processed and therefore are not curated

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Acidovorax sp. Leaf191 Leaf191

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