Name: Myxococcus fulvus M17
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 9593

Type strain:

Species: Myxococcus fulvus

Strain Designation: M17

Culture col. no.: DSM 16525, ATCC 25199

Strain history: <- ATCC <- H. D. McCurdy, University of Windsor, Canada

NCBI tax ID(s): 33 (species)

SI-ID 46637

ATCC 25199, NCIMB 13349, DSM 16525, NBRC 100333

Special Collections

DSMZ

Other strains from Myxococcus fulvus

Section

Myxococcus fulvus M17 is a spore-forming, Gram-negative bacterium that was isolated from soil.

Gram-negative
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Deltaproteobacteria*
	Order	*Myxococcales*
	Family	*Myxococcaceae*
	Genus	*Myxococcus*
	Species	**Myxococcus fulvus**
	Full Scientific Name (LPSN)	Myxococcus fulvus (Cohn 1875) Jahn 1911 (Approved Lists 1980)

Synonym

"Micrococcus fulvus"

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %90.976

Information on culture and growth conditions Culture and growth conditions

[Ref.: #6390]

Culture medium

VY/2 AGAR (DSMZ Medium 9)

[Ref.: #6390]

Culture medium growth

[Ref.: #6390]

Culture medium link

Medium recipe at MediaDive

[Ref.: #6390]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #6390]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

yes Confidence in %94

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #6390]	Sample type/isolated from	soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence AB218224 (>99% sequence identity) for Myxococcaceae from Microbeatlas

Aquatic Samples	140
Soil Samples	1093
Animal Samples	115
Plant Samples	97
Total Samples	1445

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #6390]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #6390]	Myxococcus fulvus strain ATCC 25199 16S ribosomal RNA gene, partial sequence	DQ768117	1493	GenBank ENA	33 tax ID
[Ref.: #20218]	Myxococcus fulvus gene for 16S rRNA, partial sequence, strain: NBRC 100333	AB218224	1463	GenBank ENA	33 tax ID	*
[Ref.: #20218]	Myxococcus fulvus gene for 16S-23S rRNA internal transcribed spacer regions, partial sequence, strain: NBRC 100333	AB218259	725	GenBank ENA	33 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Myxococcus fulvus DSM 16525	GCA_900111765	scaffold	GenBank ENA	33 tax ID	*
[Ref.: #66792]	Myxococcus fulvus strain DSM 16525	33.18	wgs	PATRIC	33 tax ID	*
[Ref.: #66792]	Myxococcus fulvus DSM 16525	2693429886	draft	JGI IMG/M	33 tax ID	*

[Ref.: #6390]

GC-content

69 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Myxococcus fulvus DSM 16525 NCBI: GCA_900111765.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	94	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Myxococcus fulvus DSM 16525 NCBI: GCA_900111765.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	90.976	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	93.737	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	82.369	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	73.751	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.021	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	59.609	no

Availability in culture collections External links

[Ref.: #6390]

Culture collection no.

DSM 16525, ATCC 25199

[Ref.: #78972]

SI-ID 46637

References

#6390

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 16525

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#78972

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID46637.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Myxococcus fulvus in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Myxococcus fulvus DSM 16525

Myxococcus fulvus DSM 16525

Change proposal

Change proposal