Name: Komagataeibacter europaeus 21
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 83

Type strain:

Species: Komagataeibacter europaeus

Strain Designation: 21

Culture col. no.: DSM 6160, ATCC 51845, BCC 36446, JCM 16935, BCRC 17053, LMG 18724, LMG 18890

Strain history: DSM 6160 <-- M. Sievers DES 11.

NCBI tax ID(s): 940283 (strain), 33995 (species)

SI-ID 12448

LMG 18724, ATCC 51845, DSM 6160, LMG 18890, BCRC 17053, CCRC 17053, BCC 36446, JCM 16935

Special Collections

DSMZ
JCM

Other strains from Komagataeibacter europaeus

Section

Komagataeibacter europaeus 21 is a Gram-negative bacterium that was isolated from Submerged culture vinegar generator at a factory in Esslingen in the southern part of Germany.

Gram-negative
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodospirillales*
	Family	*Acetobacteraceae*
	Genus	*Komagataeibacter*
	Species	**Komagataeibacter europaeus**
	Full Scientific Name (LPSN)	Komagataeibacter europaeus (Sievers et al. 1992) Yamada et al. 2013

	Synonym	"Komagatabacter* europaeus"*
	Synonym	Gluconoacetobacter europaeus
	Synonym	Acetobacter europaeus
	Synonym	Gluconacetobacter europaeus

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	negative Confidence in %95.833

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2455]

Culture medium

ACETOBACTER EUROPAEUS MEDIUM (DSMZ Medium 631)

[Ref.: #2455]

Culture medium growth

[Ref.: #2455]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2455]

Culture medium composition

expand / minimize

[Ref.: #2455]

Culture medium

SABOURAND GLUCOSE MEDIUM (DSMZ Medium 1429)

[Ref.: #2455]

Culture medium growth

[Ref.: #2455]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2455]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2455]			growth	28 °C
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

no Confidence in %90.077

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Submerged culture vinegar generator at a factory in Esslingen in the southern part of Germany
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence Z21936 (>99% sequence identity) for Komagataeibacter from Microbeatlas

Aquatic Samples	523
Soil Samples	662
Animal Samples	2327
Plant Samples	555
Total Samples	4067

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #2455]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2455]	A.europaeus 16S rRNA gene	Z21936	1482	GenBank ENA	940283 tax ID
[Ref.: #20218]	Gluconacetobacter europaeus gene for 16S rRNA, partial sequence, strain: DSM 6160	AB205220	1446	GenBank ENA	940283 tax ID	*
[Ref.: #20218]	A.europaeus DNA for 16S-23S spacer region	X85406	863	GenBank ENA	940283 tax ID	*
[Ref.: #20218]	Gluconacetobacter europaeus gene for 16S rRNA, partial sequence, strain: JCM 16935	AB645729	1411	GenBank ENA	33995 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Komagataeibacter europaeus LMG 18890 type strain:LMG 18890	GCA_000285295	scaffold	GenBank ENA	940283 tax ID
[Ref.: #66792]	Gluconacetobacter europaeus LMG 18890	940283.3	wgs	PATRIC	940283 tax ID	*
[Ref.: #66792]	Komagataeibacter europaeus LMG 18890	2547132370	draft	JGI IMG/M	940283 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Gluconacetobacter europaeus LMG 18890 PATRIC: 940283.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	no	95.833	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	90.553	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	75.466	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	90.077	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96.774	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	58.079	no

Availability in culture collections External links

[Ref.: #2455]

Culture collection no.

DSM 6160, ATCC 51845, BCC 36446, JCM 16935, BCRC 17053, LMG 18724, LMG 18890

[Ref.: #69766]

SI-ID 12448

Literature:

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome sequences of the high-acetic acid-resistant bacteria Gluconacetobacter europaeus LMG 18890T and G. europaeus LMG 18494 (reference strains), G. europaeus 5P3, and Gluconacetobacter oboediens 174Bp2 (isolated from vinegar).	Andres-Barrao C, Falquet L, Calderon-Copete SP, Descombes P, Ortega Perez R, Barja F	J Bacteriol	10.1128/JB.00229-11	2011	*

References

#2455

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6160

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69766

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID12448.1 )

* These data were automatically processed and therefore are not curated

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Gluconacetobacter europaeus LMG 18890

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