Name: Hafnia alvei DSM 30163
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 4938

Type strain:

Species: Hafnia alvei

Culture col. no.: DSM 30163, ATCC 13337, CIP 57.31, NCDC 434-68, NCTC 8105, WDCM 00095, JCM 1666, CCUG 15720, CCUG 41547, CECT 158, CGMCC 1.2026, HAMBI 1876, LMG 10392, NBRC 105685, NCIMB 11999, NCIMB 13060, NRRL B-4260, VTT E-022142, VTT E-991294

Strain history: CIP <- 1957, NCTC <- 1950, C.A. Stuart, Rhode Island

NCBI tax ID(s): 910996 (strain), 569 (species)

SI-ID 92428

LMG 10392, ATCC 13337, CECT 158, DSM 30163, JCM 1666, NCIMB 11999, NCTC 8105, CCUG 15720, NCIB 11999, NCIMB13060, CCUG 41547, NRRL B-4260, HAMBI 1279, HAMBI 1876, ICMP 7621, NBIMCC 1229, CNCTC 6394, CGMCC 1.2026, VTT E-991294, VTT E-022142, CIP 57.31

Other strains from Hafnia alvei

H. alvei 1004, DSM 24119
H. alvei 5-5, DSM 15533
H. alvei type 32011, DSM 30097, ATCC 11604
H. alvei WS 10209, DSM 30098
H. alvei 21183, DSM 30101
H. alvei WS 20745, DSM 30099
H. alvei FB1, DSM 102038
H. alvei mutant 11, CIP 66.52
H. alvei mutant 2, CIP 66.41
H. alvei mutant 14, CIP 66.48
H. alvei mutant 15, CIP 66.49
H. alvei CIP 66.53
H. alvei CIP A250
H. alvei mutant 7, CIP 66.44
H. alvei mutant 17, CIP 66.50
H. alvei CIP 66.51
H. alvei 1, CIP 106815
H. alvei CIP 66.40
H. alvei mutant 4, CIP 66.42
H. alvei mutant 6, CIP 66.43
H. alvei mutant 8, CIP 66.45
H. alvei mutant 9, CIP 66.46
H. alvei mutant 12, CIP 66.47
H. alvei 5632-72, CIP 104949, ATCC 29926
H. alvei CCUG 497
H. alvei CCUG 6330, NCTC 8106
H. alvei CCUG 28135
H. alvei CCUG 29511
H. alvei CCUG 29513
H. alvei CCUG 29545
H. alvei CCUG 30329
H. alvei CCUG 30687
H. alvei CCUG 30716
H. alvei CCUG 31269
H. alvei CCUG 31437
H. alvei CCUG 32973
H. alvei CCUG 35918
H. alvei CCUG 37955
H. alvei CCUG 41540
H. alvei CCUG 41637
H. alvei CCUG 42414
H. alvei CCUG 45642
H. alvei CCUG 46053
H. alvei CCUG 59411
H. alvei CCUG 59789
H. alvei JCM 24184, ATCC 9760, NCTC 6578
H. alvei CIMB 05-1105, CRBIP17.81

Section

Hafnia alvei DSM 30163 is a facultative anaerobe, Gram-negative human pathogen that was isolated from Unknown source.

Gram-negative
facultative anaerobe
human pathogen
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Enterobacterales*
	Family	*Hafniaceae*
	Genus	*Hafnia*
	Species	**Hafnia alvei**
	Full Scientific Name (LPSN)	Hafnia alvei Møller 1954 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #116316]	Gram stain	negative
[Ref.: #69480]	Gram stain	negative Confidence in %97.784

[Ref.: #116316]	Cell shape	rod-shaped

[Ref.: #116316]	Motility	yes

Multimedia content

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9173]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)

[Ref.: #9173]

Culture medium growth

[Ref.: #9173]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9173]

Culture medium composition

expand / minimize

[Ref.: #9173]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #9173]

Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #9173]

Culture medium composition

expand / minimize

[Ref.: #41708]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #41708]

Culture medium growth

[Ref.: #41708]

Culture medium composition

expand / minimize

[Ref.: #116316]

Culture medium

CIP Medium 72

[Ref.: #116316]

Culture medium growth

[Ref.: #116316]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #9173]		growth	30 °C
[Ref.: #41708]		growth	30 °C
[Ref.: #67770]		growth	37 °C
[Ref.: #116316]		growth	10-41 °C
[Ref.: #116316]	no	growth	5 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #116316]

Oxygen tolerance

facultative anaerobe

[Ref.: #69480]	Ability of spore formation	no Confidence in %94.675
[Ref.: #69481]	Ability of spore formation	no Confidence in %100

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68368]	amygdalin ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #116316]	citrate ChEBI	-	carbon source
[Ref.: #68368]	citrate ChEBI	+	assimilation	* from API 20E
[Ref.: #68368]	D-glucose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	D-mannitol ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E
[Ref.: #116316]	glucose ChEBI	+	fermentation
[Ref.: #116316]	glucose ChEBI	+	degradation
[Ref.: #68368]	L-arabinose ChEBI	+	fermentation	* from API 20E
[Ref.: #68368]	L-rhamnose ChEBI	+	fermentation	* from API 20E
[Ref.: #116316]	lactose ChEBI	-	fermentation
[Ref.: #68368]	lysine ChEBI	+	degradation	* from API 20E
[Ref.: #116316]	malonate ChEBI	+	assimilation
[Ref.: #116316]	mannitol ChEBI	+	fermentation
[Ref.: #68368]	melibiose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	myo-inositol ChEBI	-	fermentation	* from API 20E
[Ref.: #116316]	nitrate ChEBI	+	reduction
[Ref.: #116316]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	+	degradation	* from API 20E
[Ref.: #116316]	sodium thiosulfate ChEBI	-	builds gas from
[Ref.: #68368]	sorbitol ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	sucrose ChEBI	-	fermentation	* from API 20E
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	+	hydrolysis	* from API 20E
	Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #116316]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite	Production
[Ref.: #116316]	indole ChEBI	no
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #116316]	acetoin ChEBI	+
[Ref.: #116316]	glucose ChEBI		+
[Ref.: #68368]	acetoin ChEBI	+			* from API 20E
[Ref.: #68368]	indole ChEBI			-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #116316]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #116316]	beta-galactosidase	+	3.2.1.23
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym, API 20E
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #116316]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68368]	cytochrome oxidase	-	1.9.3.1	* from API 20E
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #116316]	gelatinase	-
[Ref.: #68368]	gelatinase	-		* from API 20E
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #116316]	lysine decarboxylase	+	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	+	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #116316]	ornithine decarboxylase	+	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	+	4.1.1.17	* from API 20E
[Ref.: #116316]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #116316]	tryptophan deaminase	-
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #116316]	urease	+	3.5.1.5
[Ref.: #68368]	urease	+	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #9173]	17973	+	-	+	+	+	-	+	-	-	+	-	+	+	-	-	+	-	-	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
[Ref.: #9173]	16736	+	-	+	+	+	-	+	-	-	+	-	+	+	-	-	+	-	-	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.
[Ref.: #9173]	16627	+	-	+	+	+	-	+	-	-	+	-	+	+	-	-	+	-	-	+	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #116316]	3122	not determinedn.d.	+	+	+	+	+	-	-	-	-	+	+	-	-	-	-	-	+	+	+	+	+	+	-	+	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	+	+	+	-	-	+	+	+	-	-	-	-	-	-	-	-	-	-	+	-	-	+	-	-	-	+	+	-	+	-	-	-	+	-	-	+	+	+	+	+	+	-	-	-	+

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116316]	12898	-	+	+	-	-	+	-	-	-	-	+	+	-	+	-	+	+	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #116316]	Sample type/isolated from	Unknown source
[Ref.: #116316]	Isolation date	1919
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB519795 (>99% sequence identity) for Yersiniaceae from Microbeatlas

Aquatic Samples	4333
Soil Samples	2075
Animal Samples	18887
Plant Samples	2190
Total Samples	27485

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9173]	Pathogenicity (human)	yes
[Ref.: #9173]	Pathogenicity (animal)	yes
[Ref.: #9173]	Biosafety level	2	Risk group (German classification) According to TRBA 466
[Ref.: #116316]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #124043]	Hafnia alvei gene for 16S rRNA, partial sequence, strain: NBRC 105685.	AB682261	1468	GenBank ENA	569 tax ID	*
[Ref.: #124043]	Hafnia alvei strain GD35 16S ribosomal RNA gene, partial sequence.	KF928791	1496	GenBank ENA	569 tax ID	*
[Ref.: #20218]	Hafnia alvei ATCC 13337 16S ribosomal RNA gene, partial sequence	M59155	1488	GenBank ENA	910996 tax ID	*
[Ref.: #20218]	Hafnia alvei gene for 16S ribosomal RNA, partial sequence	AB519795	1473	GenBank ENA	569 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Hafnia alvei ATCC 13337	GCA_000735375	contig	GenBank ENA	910996 tax ID
[Ref.: #67770]	Hafnia alvei ATCC 13337	GCA_003668715	contig	GenBank ENA	910996 tax ID
[Ref.: #67770]	Hafnia alvei NCTC8105	GCA_900451105	contig	GenBank ENA	569 tax ID
[Ref.: #66792]	Hafnia alvei ATCC 13337	910996.5	wgs	PATRIC	910996 tax ID	*
[Ref.: #66792]	Hafnia alvei ATCC 13337	910996.3	wgs	PATRIC	910996 tax ID	*
[Ref.: #66792]	Hafnia alvei strain NCTC8105	569.79	wgs	PATRIC	569 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Hafnia alvei ATCC 13337 PATRIC: 910996.3
[Ref.: #69481]	spore-forming	no	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Hafnia alvei ATCC 13337 PATRIC: 910996.5
[Ref.: #69480]	motile	yes	87.592	no
[Ref.: #69480]	flagellated	yes	57.29	no
[Ref.: #69480]	gram-positive	no	97.784	no
[Ref.: #69480]	anaerobic	no	95.831	no
[Ref.: #69480]	halophile	no	92.006	no
[Ref.: #69480]	spore-forming	no	94.675	no
[Ref.: #69480]	thermophile	no	99.173	yes
[Ref.: #69480]	glucose-util	yes	94.43	no
[Ref.: #69480]	aerobic	yes	85.613	no
[Ref.: #69480]	glucose-ferment	yes	92.62	no

Availability in culture collections External links

[Ref.: #9173]

Culture collection no.

DSM 30163, ATCC 13337, CIP 57.31, NCDC 434-68, NCTC 8105, WDCM 00095, JCM 1666, CCUG 15720, CCUG 41547, CECT 158, CGMCC 1.2026, HAMBI 1876, LMG 10392, NBRC 105685, NCIMB 11999, NCIMB 13060, NRRL B-4260, VTT E-022142, VTT E-991294

[Ref.: #74434]

SI-ID 92428

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Hafnia psychrotolerans sp. nov., isolated from lake water.	Gu Z, Liu Y, Shen L, Liu X, Xiao N, Jiao N, Liu H, Zhou Y, Zhang S	Int J Syst Evol Microbiol	10.1099/ijs.0.000049	2015	*
Phylogeny	Hafnia paralvei sp. nov., formerly known as Hafnia alvei hybridization group 2.	Huys G, Cnockaert M, Abbott SL, Janda JM, Vandamme P	Int J Syst Evol Microbiol	10.1099/ijs.0.018606-0	2009	*
Phylogeny	Immunochemical studies of the lipopolysaccharides of Hafnia alvei PCM 1219 and other strains with the O-antigens containing D-glucose 1-phosphate and 2-deoxy-2-[(R)-3-hydroxybutyramido]-D-glucose.	Katzenellenbogen E, Kocharova NA, Korzeniowska-Kowal A, Gamian A, Bogulska M, Szostko B, Shashkov AS, Knirel YA	Arch Immunol Ther Exp (Warsz)	10.1007/s00005-008-0034-1	2008	*
Phylogeny	Identification of two distinct hybridization groups in the genus Hafnia by 16S rRNA gene sequencing and phenotypic methods.	Janda JM, Abbott SL, Bystrom S, Probert WS	J Clin Microbiol	10.1128/JCM.43.7.3320-3323.2005	2005	*
Metabolism	Phenotypic and genotypic properties of the genus Hafnia.	Janda JM, Abbott SL, Khashe S, Probert W	J Med Microbiol	10.1099/0022-1317-51-7-575	2002	*
Genetics	Reinvestigation of the O-specific polysaccharides of Hafnia alvei lipopolysaccharides isolated from strains ATCC 13337 and 1187.	Gamian A, Katzenellenbogen E, Romanowska E, Grosskurth H, Dabrowski J	Carbohydr Res	10.1016/s0008-6215(98)00035-4	1998	*
Genetics	Lipopolysaccharide core region of Hafnia alvei: structure elucidation using chemical methods, gas chromatography-mass spectrometry, and NMR spectroscopy.	Gamian A, Katzenellenbogen E, Romanowska E, Dabrowski U, Dabrowski J	Carbohydr Res	10.1016/0008-6215(94)00266-i	1995	*
Genetics	Lipopolysaccharide core region of Hafnia alvei: serological characterization.	Lugowski C, Jachymek W, Niedziela T, Romanowska A, Witkowska D, Romanowska E	FEMS Immunol Med Microbiol	10.1111/j.1574-695X.1995.tb00020.x	1995	*
Genetics	Structural and serological characterization of Hafnia alvei lipopolysaccharide core region.	Lugowski C, Niedziela T, Jachymek W, Klonowska A, Czarny A, Rowinski S, Petersson C, Kenne L	Acta Biochim Pol		1995	*
Genetics	Serological and structural features of Hafnia alvei lipopolysaccharides containing D-3-hydroxybutyric acid.	Romanowska A, Gamian A, Witkowska D, Katzenellenbogen E, Romanowska E	FEMS Immunol Med Microbiol	10.1111/j.1574-695X.1994.tb00429.x	1994	*
Phylogeny	Structural studies on Hafnia alvei 114-60 O-antigen.	Katzenellenbogen E, Romanowska E, Witkowska D, Bogulska M, Dabrowski J	Arch Immunol Ther Exp (Warsz)		1990	*
Genetics	O-specific polysaccharides of Hafnia alvei lipopolysaccharides isolated from two serologically related strains: ATCC 13337 and 1187. A serological and structural study using chemical methods, gas chromatography/mass spectrometry and NMR spectroscopy at 500 MHz.	Gamian A, Romanowska E, Opferkuch HJ, Hauck M, Dabrowski J	Eur J Biochem	10.1111/j.1432-1033.1989.tb15251.x	1989	*

References

#9173

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 30163

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

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Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#41708 ; Curators of the CIP;

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Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

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Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

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Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID92428.1 )

#116316 Collection of Institut Pasteur ; Curators of the CIP; CIP 57.31

#124043

Dr. Isabel Schober, Dr. Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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Hafnia alvei ATCC 13337

Hafnia alvei ATCC 13337

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