Achromobacter xylosoxidans subsp. xylosoxidans (DSM 26089, CCUG 45179)

Name: Achromobacter xylosoxidans subsp. xylosoxidans (DSM 26089, CCUG 45179)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 305

Type strain

Culture col. no. DSM 26089 CCUG 45179

NCBI tax ID(s) 85698

Special Collections DSMZ CCUG

History <- CCUG <- A. Makristathis

Links

Achromobacter xylosoxidans subsp. xylosoxidans DSM 26089 is a bacterium that was isolated from human sputum of a cystic fibrosis patient.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 110298

CCUG 45179,DSM 26089

@ref 20215

Last LPSN update 2026-02-09 11:17:50

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Alcaligenaceae

Genus Achromobacter

Species Achromobacter xylosoxidans subsp. xylosoxidans

Full scientific name Achromobacter xylosoxidans subsp. xylosoxidans (Yabuuchi and Yano 1981 ex Yabuuchi and Ohyama 1971) Yabuuchi et al. 1998

Synonyms (1)

Alcaligenes xylosoxidans subsp. xylosoxidans

BacDive ID	Other strains from Achromobacter xylosoxidans subsp. xylosoxidans (8)	Type strain
297	A. xylosoxidans subsp. xylosoxidans KM543, DSM 2402, ATCC 27061, DSM 10346, NRRL ... (type strain)
300	A. xylosoxidans subsp. xylosoxidans DSM 26050, CCUG 48584
301	A. xylosoxidans subsp. xylosoxidans DSM 26051, CCUG 48684
302	A. xylosoxidans subsp. xylosoxidans R-9501, DSM 26088, CCUG 42363
304	A. xylosoxidans subsp. xylosoxidans DSM 26073, CCUG 48386
306	A. xylosoxidans subsp. xylosoxidans DSM 26101, CCUG 41513
307	A. xylosoxidans subsp. xylosoxidans DSM 26102, CCUG 56600
308	A. xylosoxidans subsp. xylosoxidans DSM 26161, CCUG 48331

Morphology

Colony morphology

@ref	Type of hemolysis	Incubation period
18159	gamma	1-2 days

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
18159	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
18159	CASO AGAR (MERCK 105458) (DSMZ Medium 220)		Medium recipe at MediaDive	Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
18159	positive	growth	37
18159	positive	growth	30

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	+	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
18159	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
18159	cytochrome-c oxidase	+	1.9.3.1
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	-		from API zym
68369	gelatinase	-		from API 20NE
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
68382	trypsin	-	3.4.21.4	from API zym
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

56680

Fatty acid	Percentage	ECL
C16:1 ω7c	33.7	15.819
C16:0	23.7	16
C14:0	7.7	14
C15:0	6.4	15
C14:0 3OH/C16:1 ISO I	5	15.485
C18:1 ω7c /12t/9t	4.3	17.824
C15:1 ω6c	4	14.856
C17:0 CYCLO	3.3	16.888
C12:0 2OH	2.2	13.178
Unidentified	1.6	16.294
C15:0 ISO 3OH	1.6	16.135
C14:0 2OH	1.4	15.205
Unidentified	0.7	14.281
C17:0	0.7	17
Unidentified	0.5	17.706
C12:0	0.5	12
C14:1 ω5c	0.5	13.899
Unidentified	0.4	15.288
Unidentified	0.3	18.134
C13:0	0.3	13
Unidentified	0.3	15.166
C12:0 3OH	0.3	13.455
C10:0 3OH	0.2	11.423
C16:1 ω5c	0.2	15.908
C17:1 ω8c	0.1	16.792

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
56680	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
56680	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	+	+	+	+	+	+
18159	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	+	+	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Infection	#Disease	#Cystic fibrosis
#Infection	#Patient	-
#Host	#Human	-
#Host Body Product	#Fluids	#Sputum

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
18159	human sputum of a cystic fibrosis patient		Wien	Austria	AUT	Europe
56680	Human sputum,cystic fibrosis	2001-04-01	Wien	Austria	AUT	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
18159	2	Risk group (German classification) According to TRBA 466

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
124043	Achromobacter xylosoxidans partial 16S rRNA gene, strain CCUG 45179	HG423408	444		85698

Genome-based predictions

Literature

References

#18159	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26089
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#56680	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 45179
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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