Name: Achromobacter xylosoxidans KM543
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 297

Type strain:

Species: Achromobacter xylosoxidans

Strain Designation: KM543

Culture col. no.: DSM 2402, ATCC 27061, DSM 10346, NRRL 84082, CCUG 56438, CIP 71.32, NCTC 10807, LMG 1863, CCM 2741, IFO 15126, NCIMB 12033, JCM 9659

Strain history: <- ATCC <- Eiko Yabuuchi, KM543 (Achromobacter xylosoxidans)

NCBI tax ID(s): 1216976 (strain), 85698 (species)

Other strains from Achromobacter xylosoxidans

Section

Achromobacter xylosoxidans KM543 is an aerobe, mesophilic bacterium that was isolated from ear discharge.

aerobe
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	23-11-2020 (DD-MM-YYYY)
	Domain	Bacteria
	Phylum	Proteobacteria
	Class	Betaproteobacteria
	Order	Burkholderiales
	Family	Alcaligenaceae
	Genus	Achromobacter
	Species	Achromobacter xylosoxidans
	Full Scientific Name (PNU)	Achromobacter xylosoxidans (ex Yabuuchi and Ohyama 1971) Yabuuchi and Yano 1981

	Synonym	Alcaligenes xylosoxidans
	Synonym	Alcaligenes denitrificans subsp. xylosoxydans

Information on morphological and physiological properties Morphology

[Ref.: #1075]

Incubation period

1-2 days

Information on culture and growth conditions Culture and growth conditions

[Ref.: #36489]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #36489]

Culture medium growth

[Ref.: #36489]

Culture medium composition

expand / minimize

[Ref.: #1075]

Culture medium

Nutrient agar (NA)

[Ref.: #1075]

Culture medium growth

[Ref.: #1075]

Culture medium link

Medium recipe at BacMedia

[Ref.: #1075]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #1075]	growth	30 °C
[Ref.: #36489]	growth	30 °C
[Ref.: #60956]	growth	37 °C

[Ref.: #1075]	Temperature range	mesophilic
[Ref.: #36489]	Temperature range	mesophilic
[Ref.: #60956]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #60956]

Oxygen tolerance

aerobe

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #1075]		catalase	+	1.11.1.6
[Ref.: #1075]		cytochrome-c oxidase	+	1.9.3.1

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #1075]	9510	-	-	-	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #1075]	14788	+	-	-	-	-	-	-	-	+	-	+/-	-	-	-	+	+	+	+	+	+	+
[Ref.: #1075]	13780	+	-	-	-	-	-	-	-	+	-	-	-	-	-	+	+	+	+	+	+	not determinedn.d.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #1075]	Sample type/isolated from	ear discharge

[Ref.: #60956]	Sample type/isolated from	Human ear
[Ref.: #60956]	Sampling date	1969
[Ref.: #60956]	Geographic location (country and/or sea, region)	Osaka
[Ref.: #60956]	Country	Japan
[Ref.: #60956]	Country ISO 3 Code	JPN
[Ref.: #60956]	Continent	Asia

Isolation sources categories

#Host Body-Site	#Organ	#Ear
#Host Body Product	#Fluids	-

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #1075]

Biosafety level

Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #1075]	Achromobacter xylosoxidans 16S rRNA gene, type strain DSM 10346	Y14908	1495	ENA	85698 tax ID

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Achromobacter xylosoxidans NCTC10807	GCA_001457475	complete	GenBank	85698 tax ID	*
[Ref.: #66792]	Achromobacter xylosoxidans FDAARGOS_147	GCA_001558755	complete	GenBank	85698 tax ID	*
[Ref.: #66792]	Achromobacter xylosoxidans FDAARGOS_789	GCA_013343135	complete	GenBank	85698 tax ID	*
[Ref.: #66792]	Achromobacter xylosoxidans R8	GCA_900010105	complete	GenBank	85698 tax ID	*
[Ref.: #66792]	Achromobacter xylosoxidans R4	GCA_900009125	complete	GenBank	85698 tax ID	*
[Ref.: #66792]	Achromobacter xylosoxidans FDAARGOS_162	GCA_001558915	complete	GenBank	85698 tax ID	*

[Ref.: #1075]

GC-content

69.2 mol%

Availability in culture collections External links

[Ref.: #1075]

Culture collection no.

DSM 2402, ATCC 27061, DSM 10346, NRRL 84082, CCUG 56438, CIP 71.32, NCTC 10807, LMG 1863, CCM 2741, IFO 15126, NCIMB 12033, JCM 9659

[Ref.: #20218]

Associated Passport(s) in StrainInfo

51746, 51741, 185639, 157985

References

#1075

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 2402

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#36489 ; Curators of the CIP;
#60956 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 56438

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These References are textmined

Change proposal

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