Name: Thermoanaerobacter thermohydrosulfuricus WC1
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 23329

Type strain:

Species: Thermoanaerobacter thermohydrosulfuricus

Strain Designation: WC1

Culture col. no.: DSM 26960

Strain history: <- R. Sparling, Dept. Microbiol., Univ. Manitoba, Winnipeg, Canada; WC1 <- T. J. Verbeke {2008}

NCBI tax ID(s): 1516 (species)

SI-ID 404254

DSM 26960

Special Collections

DSMZ

Other strains from Thermoanaerobacter thermohydrosulfuricus

Section

Thermoanaerobacter thermohydrosulfuricus WC1 is an anaerobe, spore-forming bacterium that was isolated from decaying woodchip compost.

spore-forming
anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Thermoanaerobacterales*
	Family	*Thermoanaerobacteraceae*
	Genus	*Thermoanaerobacter*
	Species	**Thermoanaerobacter thermohydrosulfuricus**
	Full Scientific Name (LPSN)	Thermoanaerobacter thermohydrosulfuricus (Klaushofer and Parkkinen 1965) Lee et al. 1993

Synonym

Clostridium thermohydrosulfuricum

Information on culture and growth conditions Culture and growth conditions

[Ref.: #18935]

Culture medium

THERMOANAEROBACTER MEDIUM (DSMZ Medium 61)

[Ref.: #18935]

Culture medium growth

[Ref.: #18935]

Culture medium link

Medium recipe at MediaDive

[Ref.: #18935]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #18935]			growth	60 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #18935]	Oxygen tolerance	anaerobe
[Ref.: #69480]	Oxygen tolerance	anaerobe Confidence in %96.346

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #18935]	Sample type/isolated from	decaying woodchip compost
[Ref.: #18935]	Geographic location (country and/or sea, region)	Quebec, Arundel
[Ref.: #18935]	Country	Canada
[Ref.: #18935]	Country ISO 3 Code	CAN
[Ref.: #18935]	Continent	North America
* marker position based on {}

Isolation sources categories

#Engineered	#Biodegradation	#Composting
#Host	#Plants	#Decomposing plant
#Host Body Product	#Plant	#Timber

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HM585213 (>99% sequence identity) for Thermoanaerobacter from Microbeatlas

Aquatic Samples	113
Soil Samples	30
Animal Samples	1192
Plant Samples	56
Total Samples	1391

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #18935]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #18935]	Thermoanaerobacter thermohydrosulfuricus strain WC1 16S ribosomal RNA gene, partial sequence	HM585213	1658	GenBank ENA	1198630 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Thermoanaerobacter thermohydrosulfuricus WC1	GCA_000353265	scaffold	GenBank ENA	1198630 tax ID	*
[Ref.: #66792]	Thermoanaerobacter thermohydrosulfuricus WC1	1198630.3	wgs	PATRIC	1198630 tax ID	*
[Ref.: #66792]	Thermoanaerobacter thermohydrosulfuricus WC1	2517572224	draft	JGI IMG/M	1198630 tax ID	*

[Ref.: #18935]

GC-content

34.35 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Thermoanaerobacter thermohydrosulfuricus WC1 WC1 NCBI: GCA_000353265.2
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	52.348	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	96.346	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	96.514	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	79.228	no
[Ref.: #69480]	thermophilic	thermophileⓘ	yes	76.737	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	73.833	no

Availability in culture collections External links

[Ref.: #18935]

Culture collection no.

DSM 26960

[Ref.: #87546]

SI-ID 404254

References

#18935

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 26960

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#87546

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID404254.1 )

* These data were automatically processed and therefore are not curated

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Thermoanaerobacter thermohydrosulfuricus WC1 WC1

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