[Ref.: #9040] |
Sample type/isolated from |
diseased rainbow trout |
|
[Ref.: #52230] |
Sample type/isolated from |
Fish,kidney of adult cutthroat trout,Salmo clarki |
[Ref.: #52230] |
Geographic location (country and/or sea, region) |
Oregon |
[Ref.: #52230] |
Country |
USA |
[Ref.: #52230] |
Country ISO 3 Code |
USA |
[Ref.: #52230] |
Continent |
North America |
|
[Ref.: #67770] |
Sample type/isolated from |
Diseased adult cutthroat trout |
|
[Ref.: #120767] |
Sample type/isolated from |
Human, Adult cutthroat trout, kidney |
[Ref.: #120767] |
Geographic location (country and/or sea, region) |
Coos county, Oregon |
[Ref.: #120767] |
Country |
United States of America |
[Ref.: #120767] |
Country ISO 3 Code |
USA |
[Ref.: #120767] |
Continent |
North America |
[Ref.: #120767] |
Isolation date |
1970 |
* marker position based on {}
|
|
Isolation sources categories |
#Host |
#Fishes |
#Salmonidae |
|
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Information on genomic background e.g. entries in nucleic sequence databass Sequence information
|
16S Sequence information: |
Only first 5 entries are displayed. Click here to see all.Click here to see only first 5 entries. |
|
|
Sequence accession description |
Seq. accession number |
Sequence length (bp) |
Sequence database |
Associated NCBI tax ID |
|
[Ref.: #67770] |
Carnobacterium maltaromaticum gene for 16S ribosomal RNA, partial sequence, strain: JCM 5348 |
LC269269 |
1495 |
|
2751 tax ID |
[Ref.: #124043] |
Carnobacterium maltaromaticum gene for 16S rRNA, partial sequence, strain: NBRC 15684. |
AB680941 |
1480 |
|
2751 tax ID |
* |
[Ref.: #20218] |
Carnobacterium piscicola partial 16S ribosomal RNA |
X54268 |
1492 |
|
2751 tax ID |
* |
[Ref.: #20218] |
Carnobacterium maltaromaticum strain ATCC 35586 16S ribosomal RNA gene, partial sequence |
JF749289 |
809 |
|
1087479 tax ID |
* |
[Ref.: #20218] |
Carnobacterium piscicola 16S ribosomal RNA gene, partial sequence; small 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AF374295 |
619 |
|
2751 tax ID |
* |
[Ref.: #20218] |
Carnobacterium piscicola 16S ribosomal RNA gene, partial sequence; medium 16S-23S intergenic spacer and tRNA-Ala gene, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AF374296 |
701 |
|
2751 tax ID |
* |
[Ref.: #20218] |
Carnobacterium piscicola 16S ribosomal RNA gene, partial sequence; large 16S-23S intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence |
AF374297 |
830 |
|
2751 tax ID |
* |
[Ref.: #124043] |
Carnobacterium piscicola partial 16S rRNA gene, strain CECT 4020 |
AJ564738 |
793 |
|
2751 tax ID |
* |
|
|
-
Availability in culture collections External links
[Ref.: #9040] |
Culture collection no. |
DSM 20730, ATCC 35586, NCDO 2762, CCUG 34645, JCM 5348, CCM 3842, CECT 4020, CIP 103158, HAMBI 2234, IFO 15684, KCTC 3676, LMG 9839, NBRC 15684, NCCB 91131, NCFB 2762, NCIMB 2264, NRRL B-14829 |
[Ref.: #71822] |
SI-ID 1688
|
* |
|
Literature: |
Only first 10 entries are displayed. Click here to see all.Click here to see only first 10 entries. |
|
Topic |
Title |
Authors |
Journal |
DOI |
Year |
|
Metabolism |
Identification of Potential Citrate Metabolism Pathways in Carnobacterium maltaromaticum. |
Li H, Ramia NE, Borges F, Revol-Junelles AM, Vogensen FK, Leisner JJ |
Microorganisms |
10.3390/microorganisms9102169 |
2021 |
* |
Pathogenicity |
Antibacterial activity of class IIa bacteriocin Cbn BM1 depends on the physiological state of the target bacteria. |
Jacquet T, Cailliez-Grimal C, Francius G, Borges F, Imran M, Duval JF, Revol-Junelles AM |
Res Microbiol |
10.1016/j.resmic.2012.04.001 |
2012 |
* |
Metabolism |
The genome sequence of the lactic acid bacterium, Carnobacterium maltaromaticum ATCC 35586 encodes potential virulence factors. |
Leisner JJ, Hansen MA, Larsen MH, Hansen L, Ingmer H, Sorensen SJ |
Int J Food Microbiol |
10.1016/j.ijfoodmicro.2011.05.012 |
2011 |
* |
Metabolism |
Selected nondigestible carbohydrates and prebiotics support the growth of probiotic fish bacteria mono-cultures in vitro. |
Rurangwa E, Laranja JL, Van Houdt R, Delaedt Y, Geraylou Z, Van de Wiele T, Van Loo J, Van Craeyveld V, Courtin CM, Delcour JA, Ollevier F |
J Appl Microbiol |
10.1111/j.1365-2672.2008.04034.x |
2009 |
* |
Biotechnology |
Inhibition of Listeria monocytogenes in cold-smoked salmon by Carnobacterium piscicola CS526 isolated from frozen surimi. |
Yamazaki K, Suzuki M, Kawai Y, Inoue N, Montville TJ |
J Food Prot |
10.4315/0362-028x-66.8.1420 |
2003 |
* |
Biotechnology |
Enhancement of nisin production by Lactococcus lactis in periodically re-alkalized cultures. |
Guerra NP, Castro LP |
Biotechnol Appl Biochem |
10.1042/BA20030059 |
2003 |
* |
Pathogenicity |
Immunomodulatory effects of nisin in turbot (Scophthalmus maximus L.). |
Villamil L, Figueras A, Novoa B |
Fish Shellfish Immunol |
10.1006/fsim.2002.0425 |
2003 |
* |
Phylogeny |
Biochemical and serological characterization of Carnobacterium spp. isolated from farmed and natural populations of striped bass and catfish. |
Baya AM, Toranzo AE, Lupiani B, Li T, Roberson BS, Hetrick FM |
Appl Environ Microbiol |
10.1128/aem.57.11.3114-3120.1991 |
1991 |
* |
Genetics |
Genome-wide comparison of Carnobacterium maltaromaticum derived from diseased fish harbouring important virulence-related genes. |
Roh H, Kim BS, Lee MK, Park CI, Kim DH |
J Fish Dis |
10.1111/jfd.13208 |
2020 |
* |
|
- References
-
#9040 |
Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ;
DSM 20730
|
-
-
-
#34121 |
; Curators of the CIP;
|
-
#52230 |
Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG;
CCUG 34645
|
-
-
#67770 |
Japan Collection of Microorganism (JCM) ; Curators of the JCM;
|
-
#68379 |
Automatically annotated from API Coryne .
|
-
#68381 |
Automatically annotated from API rID32STR .
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-
#68382 |
Automatically annotated from API zym .
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-
#69479 |
João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.:
MicrobeAtlas 1.0 beta
.
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#71822 |
Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.:
StrainInfo: A central database for resolving microbial strain identifiers
.
(
DOI 10.60712/SI-ID1688.1 )
|
-
#120767 |
Collection of Institut Pasteur ; Curators of the CIP;
CIP 103158
|
-
#124043 |
Dr. Isabel Schober, Dr. Julia Koblitz:
Data extracted from sequence databases, automatically matched based on designation and taxonomy .
|
- * These data were automatically processed and therefore are not curated
Change proposal
Successfully sent
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