Burkholderia cepacia (DSM 50180, ATCC 17770, NCIB 9089)

Name: Burkholderia cepacia (DSM 50180, ATCC 17770, NCIB 9089)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1909

Type strain

Strain Designation B-175

Culture col. no. DSM 50180 ATCC 17770 NCIB 9089 CCUG 2858 LMG 6993 1 more

NCBI tax ID(s) 292

Special Collections DSMZ CCUG

History <- ICPB <- Quesnel; B-175

Links

Burkholderia cepacia B-175 is a mesophilic human pathogen that was isolated from Soil.

mesophilic human pathogen genome sequence

Name and taxonomic classification

SI-ID 3974

LMG 6993,ATCC 17770,CCUG 2858,DSM 50180,NCIB 9089,NCIMB 9089,CECT 4091,CCRC 13906,BCRC 13906

@ref 20215

Last LPSN update 2026-02-09 11:18:12

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Burkholderiaceae

Genus Burkholderia

Species Burkholderia cepacia

Full scientific name Burkholderia cepacia (Palleroni and Holmes 1981 ex Burkholder 1950) Yabuuchi et al. 1993

Synonyms (2)

Pseudomonas cepacia
"Pseudomonas cepacia"

BacDive ID	Other strains from **Burkholderia cepacia** (89)	Type strain
1906	B. cepacia 717, DSM 7288, ATCC 25416, DSM 9897, ICPB ... (type strain)
1907	B. cepacia DSM 9241, IPT 16
1908	B. cepacia PB4, DSM 12775
1910	B. cepacia 8, DSM 50181, ATCC 17759, ICPB 2745-382, ...
100173	B. cepacia STI09278(IMET), LA6, IFO 14915, IMET 9278, ...
134989	B. cepacia 69.87, CIP 102834
135284	B. cepacia CIP 79.24
135991	B. cepacia CIP 82.38
136118	B. cepacia 652.86, CIP 102649
136877	B. cepacia 105-79, CIP 82.35
137198	B. cepacia 134-79, CIP 82.37
137604	B. cepacia 189-79, CIP 80.3
137808	B. cepacia 176-79, CIP 82.36
137861	B. cepacia 913-85, CIP 101953
138044	B. cepacia CIP 102577
138697	B. cepacia 74-86, CIP 102142
138925	B. cepacia CIP 66.34
139162	B. cepacia CIP 82.39
139163	B. cepacia CIP 82.40
139298	B. cepacia B37w, CIP 105028, ATCC 51671, NRRL B-14858
141301	B. cepacia CCUG 787, LMG 6032
141322	B. cepacia CCUG 853, LMG 6987 1
141323	B. cepacia CCUG 854
141400	B. cepacia CCUG 1440, LMG 6995
141402	B. cepacia CCUG 1463 B
141498	B. cepacia CCUG 2393
141559	B. cepacia CCUG 3000
141565	B. cepacia CCUG 3091
141578	B. cepacia CCUG 3305
141604	B. cepacia CCUG 3461 B, LMG 6997
141623	B. cepacia CCUG 3952
141709	B. cepacia CCUG 5053
141726	B. cepacia CCUG 5443
142084	B. cepacia CCUG 10531
142145	B. cepacia CCUG 11026
142155	B. cepacia CCUG 11212
143661	B. cepacia CCUG 20858
143938	B. cepacia CCUG 22001
144069	B. cepacia CCUG 22747
144070	B. cepacia CCUG 22749
144474	B. cepacia CCUG 25105
145457	B. cepacia CCUG 28594
145601	B. cepacia CCUG 28959
145812	B. cepacia CCUG 29661
146115	B. cepacia CCUG 30399
146182	B. cepacia CCUG 30533
146330	B. cepacia CCUG 30929
146447	B. cepacia CCUG 31162
146810	B. cepacia CCUG 32158
147027	B. cepacia CCUG 32669
147028	B. cepacia CCUG 32670
147767	B. cepacia CCUG 34194
147811	B. cepacia CCUG 34268
148075	B. cepacia CCUG 34776
148533	B. cepacia CCUG 35606
148616	B. cepacia CCUG 35721
149225	B. cepacia CCUG 37296
149292	B. cepacia CCUG 37431
149379	B. cepacia CCUG 37614
149396	B. cepacia CCUG 37644
149397	B. cepacia CCUG 37645
149727	B. cepacia CCUG 38286
150244	B. cepacia CCUG 39373
150778	B. cepacia CCUG 42299
150999	B. cepacia CCUG 42980
151312	B. cepacia CCUG 43724
151989	B. cepacia CCUG 45439
153621	B. cepacia CCUG 50324
154226	B. cepacia CCUG 52807
154270	B. cepacia CCUG 52942
154350	B. cepacia CCUG 53202
154485	B. cepacia CCUG 53799
154546	B. cepacia CCUG 54368
154703	B. cepacia CCUG 54885, NCIMB 12757, ATCC 29352, NRRL ...
154943	B. cepacia CCUG 55797
155726	B. cepacia CCUG 59150
155738	B. cepacia CCUG 59169
155755	B. cepacia CCUG 59215
155879	B. cepacia CCUG 59517
155885	B. cepacia CCUG 59535
157311	B. cepacia IMI 347462
163422	B. cepacia JCM 2800, GIFU 627
163423	B. cepacia JCM 2801, GIFU 644
165271	B. cepacia JCM 5506
165272	B. cepacia JCM 5507
165273	B. cepacia JCM 5508
165274	B. cepacia JCM 5509
165275	B. cepacia JCM 5510
165276	B. cepacia JCM 5511

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	98.4
125438	negative	98.5

Colony morphology

12671

Incubation period1-2 days

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
12671	NUTRIENT AGAR (DSMZ Medium 1)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
12671	TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)	Medium recipe at MediaDive	Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
12671	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)	Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
12671	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	98.5

Spore formation

@ref	Spore formation	Confidence
125439		97.8

Compound production

@ref	Compound
12671	purple phenazine pigment
12671	lipase

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	+	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	+	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	+	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	+	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	+	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
12671	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
12671	cytochrome-c oxidase	+	1.9.3.1
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	+		from API zym
68369	gelatinase	+		from API 20NE
68382	leucine arylamidase	-	3.4.11.1	from API zym
68382	lipase (C 14)	+		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68382	trypsin	-	3.4.21.4	from API zym
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
44593	-	+	-	+	+	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
12671	-	-	-	-	-	+	+	+	+	+	+	+/-	+	+	+	+	+	+	+	+	+
12671	-	-	-	-	-	+	+	+	+	+	+	+/-	+	+	+	+	+	+	+	+	+
12671	-	-	+	-	-	+	+	+	+	+	+	+/-	+	+	+	+	+	+	+	+	not determinedn.d.
12671	-	-	-	-	-	+	+	+	+	+	+	-	+	+	+	+	+	+	+	+	+
44593	-	-	-	-	-	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
44593	Soil	Trinidad	Trinidad and Tobago	TTO	Middle and South America

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Pathogenicity animal	Pathogenicity plant	Biosafety level	Biosafety level comment
12671				2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM90249914v1 assembly for Burkholderia lata	contig	GCA_902499145	482957.58	482957	65.75

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Burkholderia lata LMG 6993
NCBI: GCA_902499145

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	97.80	no
125439	motility	BacteriaNetⓘ	yes	83.60	no
125439	gram_stain	BacteriaNetⓘ	negative	98.40	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.50	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Burkholderia lata strain LMG 6993
PATRIC: 482957.58

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	98.50	no
125438	anaerobic	anaerobicⓘ	no	98.32	no
125438	spore-forming	spore-formingⓘ	no	87.56	no
125438	aerobic	aerobicⓘ	yes	89.24	no
125438	thermophilic	thermophileⓘ	no	98.00	yes
125438	flagellated	motile2+ⓘ	yes	84.26	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Burkholderia cepacia Complex Taxon K: Where to Split?	Depoorter E, De Canck E, Peeters C, Wieme AD, Cnockaert M, Zlosnik JEA, LiPuma JJ, Coenye T, Vandamme P.	Front Microbiol	10.3389/fmicb.2020.01594	2020
Metabolism	Bacterial community dynamics during start-up of a trickle-bed bioreactor degrading aromatic compounds.	Stoffels M, Amann R, Ludwig W, Hekmat D, Schleifer KH.	Appl Environ Microbiol	10.1128/aem.64.3.930-939.1998	1998
Genetics	Multiple replicons constituting the genome of Pseudomonas cepacia 17616.	Cheng HP, Lessie TG.	J Bacteriol	10.1128/jb.176.13.4034-4042.1994	1994
Pathogenicity	Extreme antimicrobial peptide and polymyxin B resistance in the genus Burkholderia.	Loutet SA, Valvano MA.	Front Cell Infect Microbiol	10.3389/fcimb.2011.00006	2011
Metabolism	A quorum-quenching approach to investigate the conservation of quorum-sensing-regulated functions within the Burkholderia cepacia complex.	Wopperer J, Cardona ST, Huber B, Jacobi CA, Valvano MA, Eberl L.	Appl Environ Microbiol	10.1128/aem.72.2.1579-1587.2006	2006
Pathogenicity	Identification of a novel virulence factor in Burkholderia cenocepacia H111 required for efficient slow killing of Caenorhabditis elegans.	Huber B, Feldmann F, Kothe M, Vandamme P, Wopperer J, Riedel K, Eberl L.	Infect Immun	10.1128/iai.72.12.7220-7230.2004	2004

References

#12671	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50180
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#44593	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 2858
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Burkholderia cepacia (DSM 50180, ATCC 17770, NCIB 9089)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Compound production

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API zym

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_902499145

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media