Burkholderia cepacia 717 | Type strain | DSM 7288, ATCC 25416, DSM 9897, ICPB PC25, NCTC 10743

Strain identifier

BacDive ID: 1906

Type strain:

Species: Burkholderia cepacia

Strain Designation: 717

Culture col. no.: DSM 7288, ATCC 25416, DSM 9897, ICPB PC25, NCTC 10743

Section

Name and taxonomic classification
Morphology and physiology
Culture and growth conditions
Isolation, sampling and environmental information
Application and interaction
Molecular biology
Strain availability

External links

Information on the name and the taxonomic classification.Name and taxonomic classification

[Ref.: #3094]	Domain	Bacteria
[Ref.: #3094]	Phylum	Proteobacteria
[Ref.: #3094]	Class	Betaproteobacteria
[Ref.: #3094]	Order	Burkholderiales
[Ref.: #3094]	Family	Burkholderiaceae
[Ref.: #3094]	Genus	Burkholderia
[Ref.: #3094]	Species	Burkholderia cepacia
[Ref.: #3094]	Full Scientific Name	Burkholderia cepacia (Palleroni and Holmes 1981) Yabuuchi et al. 1993
[Ref.: #3094]	Strain Designation	717
[Ref.: #3094]	Type strain

		Prokaryotic Nomenclature Up-to-date (PNU)	Taxonomical status	Literature reference
	Last PNU update	19-11-2019 (DD-MM-YYYY)
[Ref.: #20215]	Domain	Bacteria
[Ref.: #20215]	Phylum	Proteobacteria
[Ref.: #20215]	Class	Betaproteobacteria		Int. J. Syst. Evol. Microbiol. 56:1
[Ref.: #20215]	Family	Burkholderiaceae		Int. J. Syst. Evol. Microbiol. 56:1
[Ref.: #20215]	Genus	Burkholderia	gen. nov. (VL)	Int. J. Syst. Bacteriol. 43:398
[Ref.: #20215]	Species	Burkholderia cepacia	comb. nov. (VL)	Int. J. Syst. Bacteriol. 43:398
[Ref.: #20215]	Full Scientific Name	Burkholderia cepacia (Palleroni and Holmes 1981) Yabuuchi et al. 1993

[Ref.: #20215]	Synonym	Pseudomonas cepacia
[Ref.: #20215]	Synonym	Pseudomonas multivorans

Information on morphological and physiological propertiesMorphology and physiology

[Ref.: #3094]	Type of hemolysis	gamma
[Ref.: #3094]	Incubation period	2-3 days

[Ref.: #3094]

Name of produced compound

cepabactin

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #3094]		catalase	+	1.11.1.6
[Ref.: #3094]		cytochrome-c oxidase	+	1.9.3.1

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #3094]	10438	-	-	-	-	-	+	-	+	+	+	+	+	+	+/-	+	+	+	+	+	+	+
[Ref.: #3094]	9547	-	-	-	-	-	+	+	+	+	+	+	+	+	-	+	+	+	+	+	+	+
[Ref.: #3094]	9546	-	-	-	-	-	-	-	+	+	+	+	+	+	-	+	+	+	+	+	+	+
[Ref.: #3094]	9545	-	-	-	-	-	+	-	+	+	+	+	+	+	-	+	+	+	+	+	+	not determinedn.d.
[Ref.: #3094]	9544	-	-	-	-	-	+	-	+	+	+	+	+	+	-	+	+	+	+	+/-	+	not determinedn.d.
[Ref.: #3094]	9543	-	-	-	-	-	+	+	+	+	+	+	+	+	-	+	+	+	+	+	+	not determinedn.d.
[Ref.: #3094]	9542	-	-	-	-	-	+	-	+	+	+	+	+	+	-	+	+	+	+	+	+	+
[Ref.: #3094]	9541	-	-	-	-	-	+/-	-	+	+	+	+	+	+	+/-	+	+	+	+	+	+	+
[Ref.: #3094]	10619	-	-	-	-	-	+	-	+	+	+	+	+	+	-	+	+	+	+	+	+	-

Note that the displayed test results represent raw data and therefore may deviate!

Antibiotic susceptibility testing

Test 1

Reference

[Ref.: #3094]
Mueller-Hinton Agar
30

aerob
yes
Inhibition zone diameter in mm
resistant0
resistant0
resistant0
resistant0
22-24
resistant0
resistant0
22
20
18
10
20-22
resistant0
10
resistant0
resistant0
resistant0
20
20
resistant0
12
resistant0
resistant0
resistant0
12
10
20
22
resistant0
resistant0
26
resistant0
resistant0
10
resistant0
28

Only first 15 entries are displayed. Click here to see all.

Information on culture and growth conditionsCulture and growth conditions

[Ref.: #3094]

Culture medium

COLUMBIA BLOOD MEDIUM (DSMZ Medium 693), 28°C

[Ref.: #3094]

Culture medium growth

[Ref.: #3094]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #3094]

Culture medium

R2A MEDIUM (DSMZ Medium 830), 28°C

[Ref.: #3094]

Culture medium growth

[Ref.: #3094]

Culture medium link

medium recipe provided by DSMZ

[Ref.: #37582]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #37582]

Culture medium growth

[Ref.: #37582]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #3094]			growth	28 ̊C
[Ref.: #37582]			growth	30 ̊C

[Ref.: #3094]	Temperature range	mesophilic
[Ref.: #37582]	Temperature range	mesophilic

Information on isolation source, the sampling and environmental conditionsIsolation, sampling and environmental information

[Ref.: #3094]

Sample type/isolated from

Onion

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body-Site	#Plant	#Root (Rhizome)

What are isolation sources categories?

* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hostsApplication and interaction

[Ref.: #3094]	Pathogenicity (human)	yes
[Ref.: #3094]	Pathogenicity (animal)	yes
[Ref.: #3094]	Pathogenicity (plant)	yes
[Ref.: #3094]	Biosafety level	2	Risk group (German classification)

Information on genomic background e.g. entries in nucleic sequence databassMolecular biology

[Ref.: #3094]

GC-content

67.8 mol%

Buoyant density centrifugation (BD)

Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence database	Sequence accession description	Sequence accession number	Sequence type	Sequence length (bp)	Associated NCBI tax ID
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Burkholderia cepacia gene for DNA gyrase subunit B, partial cds, strain: ATCC 25416	AB190575		803	983594	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Burkholderia cepacia gene for DNA-directed RNA polymerase subunit D, partial cds, strain: ATCC 25416	AB190672		838	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia strain ATCC25416 RecA (recA) gene, partial cds	AF143786		1041	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia aspartate transcarbamoylase (pyrB) gene, complete cds	AF192346		1553	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia strain ATCC 25416 ribosomal subunit S21 (rpsU) gene, partial cds	AF447444		210	983594	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Burkholderia cepacia partial alkB gene for putative alkane 1-monooxygenase	AJ293344		550	983594	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Burkholderia cepacia waaC gene for heptosyltransferase I	AJ302064		2062	983594	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Burkholderia cepacia waaA gene for Kdo transferase	AJ420777		1448	983594	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Burkholderia cepacia cepI gene and cepR gene	AJ422183		2056	983594	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Burkholderia cepacia rpoS gene for RNA polymerase sigma factor	AJ457984		1089	983594	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Burkholderia cepacia bomA gene for putative outer membrane protein and emrA gene (partial) for putative multidrug resistance efflux protein	AJ627907		2977	983594	*
[Ref.: #20218]	Marker Gene (EMBL Direct submission)	Burkholderia cepacia rpoE gene for RNA polymerase sigma-E factor, strain ATCC 25416	AJ715979		2522	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia strain ATCC 25416 internal transcribed spacer 1, complete sequence	AY116921		592	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia strain ATCC 25416 16S ribosomal RNA gene, partial sequence	AY728197	16S	687	983594	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Burkholderia cepacia gene for 16S rRNA, partial sequence, strain: ATCC 25416 (= EY 645)	D13046	16S	158	983594	*
[Ref.: #20218]	Marker Gene (DDBJ Direct submission)	Burkholderia cepacia opcP1 gene for outer membrane protein, complete cds	D63823		1645	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia strain ATCC 25416 ferric uptake regulator (fur) gene, complete cds	EU090824		429	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia strain ATCC 25416 1-aminocyclopropane-1-carboxylate deaminase (acdS) gene, complete cds	EU886301		1017	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia ATCC 25416 recombinase (recA) gene, partial cds	HM598380		888	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia strain ATCC 25416 lipase operon, complete sequence	HM803235		2333	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia ATCC 25416 ATP synthase beta chain (atpD) gene, partial cds	HQ398421		994	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia ATCC 25416 glutamate synthase large subunit (gltB) gene, partial cds	HQ398469		877	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia ATCC 25416 GTP binding protein (lepA) gene, partial cds	HQ398517		800	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia ATCC 25416 recombinase A-like (recA) gene, partial sequence	HQ398563		840	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia ATCC 25416 strain LMG 1222 16S ribosomal RNA gene, partial sequence	HQ849078	16S	1124	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia ATCC 25416 strain LMG 1222 DNA gyrase subunit B (gyrB) gene, partial cds	HQ849191		590	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia ATCC 25416 recombinase A (recA) gene, partial cds	JF295011		551	983594	*
[Ref.: #20218]	INSDC Sequence	Rhizobium meliloti (clone Rhizo70-1) heat shock protein 70 (hsp70) gene, complete cds	L36602		2213	382	*
[Ref.: #20218]	INSDC Sequence	Pseudomonas cepacia (clone Psudom70-1) heat shock protein 70 (hsp70) gene, complete cds	L36603		2100	292	*
[Ref.: #20218]	INSDC Sequence	P.cepacia 16S ribosomal RNA, complete cds	M22518	16S	1473	292	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Mycoplasma capricolum ClpB (clpB) gene, partial cds; GrpE (grpE) and DnaK (dnaK) genes, complete cds; DnaJ (dnaJ) gene, partial cds; and unknown gene	U51235		5098	2095	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia plasmid pPEC320 polygalacturonase (pehA) gene, complete cds	U85788		1659	983594	*
[Ref.: #20218]	Marker Gene (GenBank Direct submission)	Burkholderia cepacia 16S ribosomal RNA gene, partial sequence	U96927	16S	1610	983594	*
[Ref.: #3094]	16S rRNA gene, Marker Gene (GenBank Direct submission)	Burkholderia cepacia strain ATCC25416 16S ribosomal RNA gene, partial sequence	AF097530		1462	983594

Availability in culture collectionsStrain availability

[Ref.: #3094]

Culture collection no.

DSM 7288, ATCC 25416, DSM 9897, ICPB PC25, NCTC 10743

[Ref.: #3094]

Strain history

<- ATCC <- R.W. Ballard; 717 <- M. Starr, ICPB; PC25 <- W. Burkholder

[Ref.: #20218]

Associated Passport(s) in StrainInfo

43439, 43431, 43442, 43446

References

#3094

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7288

#20215

Leibniz Institute DSMZ D.Gleim, M.Kracht, N.Weiss et. al.: Prokaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#37582 ; Curators of the CIP;
* These References are textmined

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