Strain identifier

BacDive ID: 1906

Type strain: Yes

Species: Burkholderia cepacia

Strain Designation: 717

Strain history: CIP <- 1980, C. Richard, Inst. Pasteur, Paris, France <- ATCC <- R.W. Ballard: strain 717 <- M.P. Starr <- W.H. Burkholder, Pseudomonas cepacia

NCBI tax ID(s): 983594 (strain), 292 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 3094

BacDive-ID: 1906

DSM-Number: 7288

keywords: genome sequence, 16S sequence, Bacteria, obligate aerobe, mesophilic, motile, antibiotic resistance, human pathogen

description: Burkholderia cepacia 717 is an obligate aerobe, mesophilic, motile human pathogen that has multiple antibiotic resistances and was isolated from Onion.

NCBI tax id

NCBI tax idMatching level
292species
983594strain

strain history

@refhistory
3094<- ATCC <- R.W. Ballard; 717 <- M. Starr, ICPB; PC25 <- W. Burkholder
67770Y. Kosako 85005 <-- Nissui Pharm. Co., Ltd. <-- ATCC 25416 <-- R. W. Ballard 717 <-- M. Starr ICPB PC 25 <-- W. Burkholder.
117247CIP <- 1980, C. Richard, Inst. Pasteur, Paris, France <- ATCC <- R.W. Ballard: strain 717 <- M.P. Starr <- W.H. Burkholder, Pseudomonas cepacia

doi: 10.13145/bacdive1906.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Betaproteobacteria
  • order: Burkholderiales
  • family: Burkholderiaceae
  • genus: Burkholderia
  • species: Burkholderia cepacia
  • full scientific name: Burkholderia cepacia (Palleroni and Holmes 1981 ex Burkholder 1950) Yabuuchi et al. 1993
  • synonyms

    • @ref: 20215
    • synonym: Pseudomonas cepacia

@ref: 3094

domain: Bacteria

phylum: Proteobacteria

class: Betaproteobacteria

order: Burkholderiales

family: Burkholderiaceae

genus: Burkholderia

species: Burkholderia cepacia

full scientific name: Burkholderia cepacia (Palleroni and Holmes 1981) Yabuuchi et al. 1993

strain designation: 717

type strain: yes

Morphology

cell morphology

@refmotilityconfidencegram staincell shape
69480yes91.674
6948099.989negative
117247yesnegativerod-shaped

colony morphology

  • @ref: 3094
  • type of hemolysis: gamma
  • incubation period: 2-3 days

pigmentation

  • @ref: 117247
  • production: no
  • name: Pyocyanin

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
3094COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base
3094R2A MEDIUM (DSMZ Medium 830)yeshttps://mediadive.dsmz.de/medium/830Name: R2A MEDIUM (DSMZ Medium 830) Composition: Agar 15.0 g/l Casamino acids 0.5 g/l Starch 0.5 g/l Glucose 0.5 g/l Proteose peptone 0.5 g/l Yeast extract 0.5 g/l K2HPO4 0.3 g/l Na-pyruvate 0.3 g/l MgSO4 x 7 H2O 0.05 g/l Distilled water
37582MEDIUM 72- for trypto casein soja agaryesDistilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
117247CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72

culture temp

@refgrowthtypetemperaturerange
3094positivegrowth28mesophilic
37582positivegrowth30mesophilic
67770positivegrowth30mesophilic
117247positivegrowth5-37
117247nogrowth41thermophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 117247
  • oxygen tolerance: obligate aerobe

antibiogram

@refmediumincubation temperatureoxygen conditionPenicillin Goxacillinampicillinticarcillinmezlocillincefalotincefazolincefotaximeaztreonamimipenemtetracyclinechloramphenicolgentamycinamikacinvancomycinerythromycinlincomycinofloxacinnorfloxacincolistinpipemidic acidnitrofurantoinbacitracinpolymyxin bkanamycinneomycindoxycyclineceftriaxoneclindamycinfosfomycinmoxifloxacinlinezolidnystatinquinupristin/dalfopristinteicoplaninpiperacillin/tazobactam
3094Mueller-Hinton Agar30aerob000022-24002220181020-2201000020200120001210202200260010028
3094Mueller-Hinton Agar30aerob000022-24002220181020-2201000020200120001210202200260010028
3094Mueller Hinton30aerob00002200202014620-2201006018-2016-18010-1200014-161020220022-24008-10028-30

spore formation

@refspore formationconfidence
69481no100
69480no99.981

compound production

  • @ref: 3094
  • compound: cepabactin

halophily

@refsaltgrowthtested relationconcentration
117247NaClpositivegrowth0-4 %
117247NaClnogrowth6 %
117247NaClnogrowth8 %
117247NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836924265gluconate+assimilation
6836959640N-acetylglucosamine+assimilation
6836916899D-mannitol+assimilation
6836916024D-mannose+assimilation
6836930849L-arabinose+assimilation
6836917634D-glucose+assimilation
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836927897tryptophan-energy source
6836917632nitrate-reduction
11724716947citrate+carbon source
1172474853esculin+hydrolysis
11724717632nitrate-reduction
11724716301nitrite-reduction
11724715882phenol+degradation
11724717632nitrate-respiration

antibiotic resistance

  • @ref: 117247
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: no
  • is resistant: yes

metabolite production

@refChebi-IDmetaboliteproduction
6836935581indoleno
11724735581indoleno

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
3094catalase+1.11.1.6
3094cytochrome-c oxidase+1.9.3.1
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)+
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6
117247oxidase+
117247beta-galactosidase+3.2.1.23
117247alcohol dehydrogenase-1.1.1.1
117247gelatinase-
117247amylase-
117247DNase-
117247caseinase-3.4.21.50
117247catalase+1.11.1.6
117247tween esterase+
117247gamma-glutamyltransferase+2.3.2.2
117247lecithinase+
117247lipase-
117247lysine decarboxylase+4.1.1.18
117247ornithine decarboxylase-4.1.1.17
117247protease-
117247tryptophan deaminase-
117247urease-3.5.1.5

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
117247-+++++----++----++--

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
3094--+--+/--++++++-+++++++
3094-----+-++++++-+++++++
3094-----+-++++++-++++++-
3094-----+-+++++++/-+++++++
3094-----++++++++-+++++++
3094-------++++++-+++++++
3094-----+-++++++-++++++
3094-----+-++++++-+++++/-+
3094-----++++++++-++++++
3094-----+-++++++-+++++++
3094-----+/--+++++++/-+++++++
3094-----+-++++++-+++++++

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
117247+++++--+-----+-+++++++--+-++++++++--++-+---+++--++++-+++++-+++++++++---+++++++-++++++++-+++++++++++

Isolation, sampling and environmental information

isolation

@refsample type
3094Onion
67770Onion
117247Onion

isolation source categories

Cat1Cat2Cat3
#Host#Plants#Herbaceous plants (Grass,Crops)
#Host Body-Site#Plant#Root (Rhizome)

taxonmaps

  • @ref: 69479
  • File name: preview.99_198.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_12;96_18;97_18;98_21;99_198&stattab=map
  • Last taxonomy: Burkholderia
  • 16S sequence: U96927
  • Sequence Identity:
  • Total samples: 5054
  • soil counts: 1055
  • aquatic counts: 564
  • animal counts: 1930
  • plant counts: 1505

Safety information

risk assessment

@refpathogenicity humanpathogenicity animalpathogenicity plantbiosafety levelbiosafety level comment
3094yesyesyes2Risk group (German classification)
1172472Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Burkholderia cepacia strain ATCC 25416 16S ribosomal RNA gene, partial sequenceAY728197687ena983594
20218Burkholderia cepacia gene for 16S rRNA, partial sequence, strain: ATCC 25416 (= EY 645)D13046158ena983594
20218Burkholderia cepacia ATCC 25416 strain LMG 1222 16S ribosomal RNA gene, partial sequenceHQ8490781124ena983594
20218P.cepacia 16S ribosomal RNA, complete cdsM225181473ena292
20218Burkholderia cepacia 16S ribosomal RNA gene, partial sequenceU969271610ena983594
3094Burkholderia cepacia strain ATCC25416 16S ribosomal RNA gene, partial sequenceAF0975301462ena983594

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Burkholderia cepacia ATCC 25416 UCB 717GCA_001411495completencbi983594
66792Burkholderia cepacia ATCC 25416GCA_006094315completencbi983594
66792Burkholderia cepacia ATCC 25416GCA_003546465completencbi983594
66792Burkholderia cepacia NBRC 14074GCA_001528845contigncbi292
66792Burkholderia cepacia ATCC 25416GCA_000473485scaffoldncbi983594
66792Burkholderia cepacia ATCC 25416983594.7wgspatric983594
66792Burkholderia cepacia ATCC 25416983594.16completepatric983594
66792Burkholderia cepacia ATCC 25416983594.32completepatric983594
66792Burkholderia cepacia ATCC 25416983594.35completepatric983594
66792Burkholderia cepacia ATCC 25416 strain UCB 717983594.23plasmidpatric983594
66792Burkholderia cepacia strain NBRC 14074292.70wgspatric292
66792Burkholderia cepacia strain NCTC10743292.148wgspatric292
66792Burkholderia cepacia ATCC 254162509276048draftimg983594
66792Burkholderia cepacia ATCC 254162912464834completeimg983594
66792Burkholderia cepacia NBRC 140742731957558draftimg292
66792Burkholderia cepacia NCTC 107432916573127draftimg292
67770Burkholderia cepacia NCTC10743GCA_900446175contigncbi292

GC content

  • @ref: 3094
  • GC-content: 67.8
  • method: Buoyant density centrifugation (BD)

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
flagellatedno84.168no
gram-positiveno98.322no
anaerobicno98.537no
aerobicyes90.376no
halophileno93.827no
spore-formingno91.874no
glucose-utilyes91.161yes
thermophileno99.551no
motileyes85.402no
glucose-fermentno87.225no

External links

@ref: 3094

culture collection no.: DSM 7288, ATCC 25416, DSM 9897, ICPB PC25, NCTC 10743, JCM 5964, BCRC 13208, CCUG 12691, CCUG 13226, CECT 4137, CGMCC 1.1813, CGMCC 1.3393, CIP 80.24, IFO 14074, KCTC 2966, LMG 1222, NBRC 14074, NRRL B-14810, VTT E-94512, ACM 1771

straininfo link

@refstraininfo
715503962
71551312263

literature

topicPubmed-IDtitleauthorsjournalDOIyearmeshtopic2
Metabolism2533244Cepabactin from Pseudomonas cepacia, a new type of siderophore.Meyer JM, Hohnadel D, Halle FJ Gen Microbiol10.1099/00221287-135-6-14791989Iron/metabolism, Iron Chelating Agents/*isolation & purification/pharmacology, Phenols/isolation & purification, Pseudomonas/*analysis/drug effects/growth & development, Siderophores, Structure-Activity Relationship, Succinates/metabolism, Succinic Acid, *ThiazolesEnzymology
Metabolism2865249Occurrence of succinyl derivatives in the catabolism of arginine in Pseudomonas cepacia.Vander Wauven C, Stalon VJ Bacteriol10.1128/jb.164.2.882-886.19851985Acyltransferases/metabolism, Arginine/analogs & derivatives/*metabolism, Glutamates/metabolism, Glutamic Acid, Ornithine/analogs & derivatives/metabolism, Oxamic Acid/pharmacology, Pseudomonas/enzymology/growth & development/*metabolism, Succinates/metabolismEnzymology
Phenotype7212403[Phenotype characteristics of 100 strains of Pseudomonas cepacia. Proposition of a biovars classification (author's transl)].Richard C, Monteil H, Megraud F, Chatelain R, Laurent BAnn Biol Clin (Paris)1981Humans, Microbial Sensitivity Tests, Phenotype, Pseudomonas/*classification/genetics/metabolismPhylogeny
Enzymology7476209A physical genome map of the Burkholderia cepacia type strain.Rodley PD, Romling U, Tummler BMol Microbiol10.1111/j.1365-2958.1995.mmi_17010057.x1995Base Sequence, Burkholderia cepacia/*genetics, Electrophoresis, Gel, Pulsed-Field/methods, Electrophoresis, Gel, Two-Dimensional/methods, *Genome, Bacterial, Molecular Sequence Data, Operon/genetics, Replicon/genetics, *Restriction MappingGenetics
Metabolism7576529Isolation of uracil auxotrophs from Burkholderia cepacia ATCC 25416.Li K, West TPLett Appl Microbiol10.1111/j.1472-765x.1995.tb01074.x1995Aspartate Carbamoyltransferase/metabolism, Burkholderia cepacia/enzymology/*metabolism, Cycloserine/metabolism, Dihydroorotase/metabolism, Ethyl Methanesulfonate, Mutagenesis, Orotate Phosphoribosyltransferase/metabolism, Orotidine-5'-Phosphate Decarboxylase/metabolism, Pyrimidine Nucleotides/metabolism, Pyrimidines/biosynthesis, Uracil/*metabolismPhylogeny
Metabolism7576530Pyrimidine synthesis in Burkholderia cepacia ATCC 25416.Li K, West TPLett Appl Microbiol10.1111/j.1472-765x.1995.tb01075.x1995Aspartate Carbamoyltransferase/antagonists & inhibitors/metabolism, Burkholderia cepacia/*enzymology/metabolism, Cytidine Deaminase/metabolism, Cytosine Deaminase, Diphosphates/pharmacology, Enzyme Inhibitors/pharmacology, Nucleoside Deaminases/metabolism, Nucleotides/pharmacology, Pyrimidines/*biosynthesis, Uracil/metabolism, Uridine Phosphorylase/metabolismEnzymology
Metabolism7580051Ornibactin production and transport properties in strains of Burkholderia vietnamiensis and Burkholderia cepacia (formerly Pseudomonas cepacia).Meyer JM, Van VT, Stintzi A, Berge O, Winkelmann GBiometals10.1007/BF001416041995Biological Transport, Burkholderia/classification/genetics/*metabolism, Iron/metabolism, Oligopeptides/*biosynthesis, Ornithine/metabolism, Siderophores/*biosynthesisBiotechnology
Phylogeny8995797Systematic study of the genus Vogesella gen. nov. and its type species, Vogesella indigofera comb. nov.Grimes DJ, Woese CR, MacDonell MT, Colwell RRInt J Syst Bacteriol10.1099/00207713-47-1-191997Bacteriological Techniques, Culture Media/chemistry/metabolism, DNA, Bacterial/analysis, Molecular Sequence Data, Phylogeny, Pseudomonas/*classification/growth & development/ultrastructure, RNA, Ribosomal, 16S/analysis, RNA, Ribosomal, 5S/analysisGenetics
Enzymology9047353Cloning and expression of the major porin protein gene opcP of Burkholderia (formerly Pseudomonas) cepacia in Escherichia coli.Tsujimoto H, Gotoh N, Yamagishi J, Oyamada Y, Nishino TGene10.1016/s0378-1119(96)00692-01997Amino Acid Sequence, Bacterial Outer Membrane Proteins/*biosynthesis/*genetics, Base Sequence, Burkholderia cepacia/*genetics, Cloning, Molecular, Escherichia coli/*genetics, Molecular Sequence Data, Recombinant Proteins/biosynthesis/genetics, Sequence Analysis, DNA, Sequence Homology, Amino AcidGenetics
Enzymology9304858Mobilization, cloning, and sequence determination of a plasmid-encoded polygalacturonase from a phytopathogenic Burkholderia (Pseudomonas) cepacia.Gonzalez CF, Pettit EA, Valadez VA, Provin EMMol Plant Microbe Interact10.1094/MPMI.1997.10.7.8401997Amino Acid Sequence, Base Sequence, Burkholderia cepacia/*enzymology/genetics/pathogenicity, Cloning, Molecular, DNA, Bacterial, Molecular Sequence Data, Mutagenesis, Site-Directed, Plasmids, Polygalacturonase/*genetics, Sequence Homology, Amino AcidGenetics
Phylogeny9861699Isolation and characterisation of disodium (4-amino-4-deoxy-beta-L- arabinopyranosyl)-(1-->8)-(D-glycero-alpha-D-talo-oct-2-ulopyranosylona te)- (2-->4)-(methyl 3-deoxy-D-manno-oct-2-ulopyranosid)onate from the lipopolysaccharide of Burkholderia cepacia.Isshiki Y, Kawahara K, Zahringer UCarbohydr Res10.1016/s0008-6215(98)00179-71998Burkholderia cepacia/*chemistry, Carbohydrate Sequence, Chromatography, High Pressure Liquid, Lipopolysaccharides/*chemistry, Magnetic Resonance Spectroscopy, Methylation, Molecular Sequence Data, Polysaccharides, Bacterial/chemistry/*isolation & purificationGenetics
Phylogeny10488171Development of rRNA-based PCR assays for identification of Burkholderia cepacia complex isolates recovered from cystic fibrosis patients.LiPuma JJ, Dulaney BJ, McMenamin JD, Whitby PW, Stull TL, Coenye T, Vandamme PJ Clin Microbiol10.1128/JCM.37.10.3167-3170.19991999Base Sequence, Burkholderia cepacia/classification/*isolation & purification, Cystic Fibrosis/*microbiology, Humans, Molecular Sequence Data, Polymerase Chain Reaction/*methods, RNA, Ribosomal, 16S/*genetics, RNA, Ribosomal, 23S/*genetics, Sensitivity and SpecificityPathogenicity
Metabolism10696871Role of cytosine deaminase and beta-alanine-pyruvate transaminase in pyrimidine base catabolism by Burkholderia cepacia.West TPAntonie Van Leeuwenhoek10.1023/a:10020622022822000Burkholderia cepacia/enzymology/growth & development/*metabolism, Culture Media, Cytosine Deaminase, Nucleoside Deaminases/*metabolism, Pyrimidines/*metabolism, Transaminases/*metabolism, beta-Alanine-Pyruvate TransaminaseCultivation
Enzymology12427755Construction of a deep-rough mutant of Burkholderia cepacia ATCC 25416 and characterization of its chemical and biological properties.Gronow S, Noah C, Blumenthal A, Lindner B, Brade HJ Biol Chem10.1074/jbc.M2069422002002Base Sequence, Burkholderia cepacia/chemistry/enzymology/genetics/*physiology, Cloning, Molecular, DNA Primers, Electrophoresis, Polyacrylamide Gel, Glycosyltransferases/genetics, Humans, Macrophages/metabolism/microbiology, Molecular Sequence Data, *Mutation, Oligosaccharides/chemistry, Spectrometry, Mass, Electrospray Ionization, Transferases/genetics, Tumor Necrosis Factor-alpha/metabolismPathogenicity
Metabolism12620866Quorum-sensing system and stationary-phase sigma factor (rpoS) of the onion pathogen Burkholderia cepacia genomovar I type strain, ATCC 25416.Aguilar C, Bertani I, Venturi VAppl Environ Microbiol10.1128/AEM.69.3.1739-1747.200320034-Butyrolactone/*analogs & derivatives/metabolism, Bacterial Proteins/chemistry/*genetics/metabolism, Burkholderia cepacia/genetics/*growth & development/*pathogenicity, *Gene Expression Regulation, Bacterial, *Ligases, Molecular Sequence Data, Onions/*microbiology, Plant Diseases/microbiology, Sequence Analysis, DNA, Sigma Factor/*genetics/metabolism, *Signal TransductionGenetics
Metabolism12686627Transmissible Burkholderia cepacia genomovar IIIa strains bind and convert monomeric iron(III) protoporphyrin IX into the mu-oxo oligomeric form.Smalley JW, Charalabous P, Hart CA, Silver JMicrobiology (Reading)10.1099/mic.0.26160-02003Bacterial Outer Membrane Proteins/metabolism, Burkholderia Infections/epidemiology/microbiology/transmission, Burkholderia cepacia/classification/genetics/*metabolism, Carrier Proteins, Catalase, Cystic Fibrosis/epidemiology/*microbiology, Dimerization, *Disease Outbreaks, Heme-Binding Proteins, Hemeproteins, Humans, Hydrogen-Ion Concentration, Iron/metabolism, Protein Binding, Protoporphyrins/*metabolismPathogenicity
Metabolism14563881Identification of quorum-sensing-regulated genes of Burkholderia cepacia.Aguilar C, Friscina A, Devescovi G, Kojic M, Venturi VJ Bacteriol10.1128/JB.185.21.6456-6462.20032003Bacterial Proteins/*metabolism, Burkholderia cepacia/*genetics/metabolism, Cloning, Molecular, Gene Expression Regulation, Bacterial/genetics, *Genes, Bacterial, Homoserine/*analogs & derivatives/biosynthesis, Lactones, Promoter Regions, Genetic, Transcription, GeneticEnzymology
Pathogenicity16388025Identification of an RTX determinant of Burkholderia cenocepacia J2315 by subtractive hybridization.Whitby PW, VanWagoner TM, Taylor AA, Seale TW, Morton DJ, LiPuma JJ, Stull TLJ Med Microbiol10.1099/jmm.0.46138-02006Amino Acid Sequence, Bacterial Toxins/chemistry/*genetics, Burkholderia Infections/microbiology, Burkholderia cepacia/genetics/metabolism, Burkholderia cepacia complex/classification/*genetics/isolation & purification/metabolism, Environmental Microbiology, Hemagglutination Tests, Hemagglutinins/chemistry/*genetics/metabolism, Hemolysis, Humans, Molecular Sequence Data, Nucleic Acid Hybridization/methods, Operon, Repetitive Sequences, Nucleic Acid/*genetics, Sequence AlignmentMetabolism
Enzymology17493828Isolation, heterologous expression and characterization of an endo-polygalacturonase produced by the phytopathogen Burkholderia cepacia.Massa C, Degrassi G, Devescovi G, Venturi V, Lamba DProtein Expr Purif10.1016/j.pep.2007.03.0192007Amino Acid Sequence, Burkholderia cepacia/*enzymology, Electrophoresis, Polyacrylamide Gel, Enzyme Stability, Escherichia coli/metabolism, Molecular Sequence Data, Polygalacturonase/chemistry/*isolation & purification/metabolism, Recombinant Proteins/isolation & purificationPhylogeny
Cultivation20730523Influence of Legionella pneumophila and other water bacteria on the survival and growth of Acanthamoeba polyphaga.Anacarso I, Guerrieri E, Bondi M, de Niederhausern S, Iseppi R, Sabia C, Contri M, Borella P, Messi PArch Microbiol10.1007/s00203-010-0618-02010Acanthamoeba/*growth & development/*microbiology, Coculture Techniques, Culture Media, Endocytosis, Legionella pneumophila/*growth & development, Phagosomes/*microbiology, Pseudomonas aeruginosa/growth & development, Trophozoites/growth & development, *Water Microbiology
Metabolism25860696Application of lipase from Burkholderia cepacia in the degradation of agro-industrial effluent.Mello Bueno PR, de Oliveira TF, Castiglioni GL, Soares Junior MS, Ulhoa CJWater Sci Technol10.2166/wst.2015.0372015Bacterial Proteins/chemistry/*metabolism, Burkholderia cepacia/*metabolism, Food-Processing Industry, Hydrogen-Ion Concentration, Hydrolysis, Industrial Waste/*analysis, Lipase/chemistry/*metabolism, Solanum tuberosum/*chemistry, TemperatureBiotechnology
30112155Antibacterial effects of microbial synthesized silver-copper nanoalloys on Escherichia coli, Burkholderia cepacia, Listeria monocytogenes and Brucella abortus.Mohammadi S, Jazani NH, Kouhkan M, Babaganjeh LAIran J Microbiol2018
30708508First Report of Bacterial Leaf Streak of Strelitzia reginae Caused by Burkholderia cepacia.You CP, Xiang MM, Zhang YXPlant Dis10.1094/PDIS-02-13-0205-PDN2014
Enzymology32691184Enantioselective synthesis of a chiral intermediate of himbacine analogs by Burkholderia cepacia lipase A.Chen Y, Gao F, Zheng G, Gao SBiotechnol Lett10.1007/s10529-020-02969-z2020Alkaloids/*biosynthesis/*chemistry/genetics, Burkholderia cepacia/*enzymology, Catalysis, Escherichia coli/genetics, Furans/*chemistry, Gene Expression/genetics, Naphthalenes/*chemistry, Piperidines/*chemistry, Stereoisomerism, Sterol Esterase/*chemistry
Pathogenicity32799627Outer membrane vesicles produced by Burkholderia cepacia cultured with subinhibitory concentrations of ceftazidime enhance pro-inflammatory responses.Kim SY, Kim MH, Son JH, Kim SI, Yun SH, Kim K, Kim S, Shin M, Lee JCVirulence10.1080/21505594.2020.18021932020A549 Cells, Animals, Anti-Bacterial Agents/*pharmacology, Bacterial Outer Membrane/drug effects/immunology, Burkholderia cepacia/*drug effects/immunology/*pathogenicity, Ceftazidime/*pharmacology, Female, Humans, *Inflammation, Mice, Mice, Inbred BALB C, Microbial Sensitivity Tests, Secretory Vesicles/*drug effects/immunology

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3094Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 7288)https://www.dsmz.de/collection/catalogue/details/culture/DSM-7288
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
37582Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/11117
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
68369Automatically annotated from API 20NE
68382Automatically annotated from API zym
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch10.21203/rs.3.rs-2527258/v1Predictions based on the model GenomeNet Sporulation v. 1
71550Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID3962.1StrainInfo: A central database for resolving microbial strain identifiers
71551Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID312263.1StrainInfo: A central database for resolving microbial strain identifiers
117247Curators of the CIPCollection of Institut Pasteur (CIP 80.24)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2080.24