Cite this strain

Burkholderia cepacia (JCM 5506)

Name: Burkholderia cepacia (JCM 5506)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 165271

Type strain

Culture col. no. JCM 5506

NCBI tax ID(s) 292

Special Collections JCM

History T. Taniguchi 526.

Links

Burkholderia cepacia JCM 5506 is a bacterium that was isolated from Clinical specimen.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 64523

JCM 5506

@ref 20215

Last LPSN update 2026-02-09 11:40:03

Domain Bacteria

Phylum Pseudomonadota

Class Betaproteobacteria

Order Burkholderiales

Family Burkholderiaceae

Genus Burkholderia

Species Burkholderia cepacia

Full scientific name Burkholderia cepacia (Palleroni and Holmes 1981 ex Burkholder 1950) Yabuuchi et al. 1993

Synonyms (2)

Pseudomonas cepacia
"Pseudomonas cepacia"

BacDive ID	Other strains from **Burkholderia cepacia** (89)	Type strain
1906	B. cepacia 717, DSM 7288, ATCC 25416, DSM 9897, ICPB ... (type strain)
1907	B. cepacia DSM 9241, IPT 16
1908	B. cepacia PB4, DSM 12775
1909	B. cepacia B-175, DSM 50180, ATCC 17770, NCIB 9089, ...
1910	B. cepacia 8, DSM 50181, ATCC 17759, ICPB 2745-382, ...
100173	B. cepacia STI09278(IMET), LA6, IFO 14915, IMET 9278, ...
134989	B. cepacia 69.87, CIP 102834
135284	B. cepacia CIP 79.24
135991	B. cepacia CIP 82.38
136118	B. cepacia 652.86, CIP 102649
136877	B. cepacia 105-79, CIP 82.35
137198	B. cepacia 134-79, CIP 82.37
137604	B. cepacia 189-79, CIP 80.3
137808	B. cepacia 176-79, CIP 82.36
137861	B. cepacia 913-85, CIP 101953
138044	B. cepacia CIP 102577
138697	B. cepacia 74-86, CIP 102142
138925	B. cepacia CIP 66.34
139162	B. cepacia CIP 82.39
139163	B. cepacia CIP 82.40
139298	B. cepacia B37w, CIP 105028, ATCC 51671, NRRL B-14858
141301	B. cepacia CCUG 787, LMG 6032
141322	B. cepacia CCUG 853, LMG 6987 1
141323	B. cepacia CCUG 854
141400	B. cepacia CCUG 1440, LMG 6995
141402	B. cepacia CCUG 1463 B
141498	B. cepacia CCUG 2393
141559	B. cepacia CCUG 3000
141565	B. cepacia CCUG 3091
141578	B. cepacia CCUG 3305
141604	B. cepacia CCUG 3461 B, LMG 6997
141623	B. cepacia CCUG 3952
141709	B. cepacia CCUG 5053
141726	B. cepacia CCUG 5443
142084	B. cepacia CCUG 10531
142145	B. cepacia CCUG 11026
142155	B. cepacia CCUG 11212
143661	B. cepacia CCUG 20858
143938	B. cepacia CCUG 22001
144069	B. cepacia CCUG 22747
144070	B. cepacia CCUG 22749
144474	B. cepacia CCUG 25105
145457	B. cepacia CCUG 28594
145601	B. cepacia CCUG 28959
145812	B. cepacia CCUG 29661
146115	B. cepacia CCUG 30399
146182	B. cepacia CCUG 30533
146330	B. cepacia CCUG 30929
146447	B. cepacia CCUG 31162
146810	B. cepacia CCUG 32158
147027	B. cepacia CCUG 32669
147028	B. cepacia CCUG 32670
147767	B. cepacia CCUG 34194
147811	B. cepacia CCUG 34268
148075	B. cepacia CCUG 34776
148533	B. cepacia CCUG 35606
148616	B. cepacia CCUG 35721
149225	B. cepacia CCUG 37296
149292	B. cepacia CCUG 37431
149379	B. cepacia CCUG 37614
149396	B. cepacia CCUG 37644
149397	B. cepacia CCUG 37645
149727	B. cepacia CCUG 38286
150244	B. cepacia CCUG 39373
150778	B. cepacia CCUG 42299
150999	B. cepacia CCUG 42980
151312	B. cepacia CCUG 43724
151989	B. cepacia CCUG 45439
153621	B. cepacia CCUG 50324
154226	B. cepacia CCUG 52807
154270	B. cepacia CCUG 52942
154350	B. cepacia CCUG 53202
154485	B. cepacia CCUG 53799
154546	B. cepacia CCUG 54368
154703	B. cepacia CCUG 54885, NCIMB 12757, ATCC 29352, NRRL ...
154943	B. cepacia CCUG 55797
155726	B. cepacia CCUG 59150
155738	B. cepacia CCUG 59169
155755	B. cepacia CCUG 59215
155879	B. cepacia CCUG 59517
155885	B. cepacia CCUG 59535
157311	B. cepacia IMI 347462
163422	B. cepacia JCM 2800, GIFU 627
163423	B. cepacia JCM 2801, GIFU 644
165272	B. cepacia JCM 5507
165273	B. cepacia JCM 5508
165274	B. cepacia JCM 5509
165275	B. cepacia JCM 5510
165276	B. cepacia JCM 5511

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	37

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

67770

Sample typeClinical specimen

Taxonmaps

69479

Global distribution of 16S sequence LC462128 (>99% sequence identity) for Burkholderia from Microbeatlas

Aquatic Samples	564
Soil Samples	1055
Animal Samples	1930
Plant Samples	1505
Total Samples	5054

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Burkholderia cepacia gene for 16S rRNA, partial sequence, strain: JCM 5506	AB626115	1455		292
67770	Burkholderia cepacia JCM 5506 gene for 16S ribosomal RNA, partial sequence	LC462128	1455		292

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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