Finegoldia magna (DSM 20470, ATCC 15794, CCUG 17636)

Name: Finegoldia magna (DSM 20470, ATCC 15794, CCUG 17636)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17986

Type strain

Strain Designation 2974

Culture col. no. DSM 20470 ATCC 15794 CCUG 17636 NCTC 11804 KCTC 15020 6 more

NCBI tax ID(s) 1260

Special Collections DSMZ CCUG JCM KCTC

History DSMZ <- ATCC; ATCC 15794 <- A. R. Prevot; 2974 (Diplococcus magnus) <- H. Tissier; JCM <-- DSM 20470 <-- ATCC 15794 <-- A. R. Prévot 2974 <-- Tissier and Martelly. KCTC <- CCUG <- E Yabuuchi,Gifu,Japan 28 May 1985 <- ATCC <- AR Prevot, 2974, `Diplococcus magnus` <- Tissier and Martelly

Links

Finegoldia magna 2974 is an anaerobe, coccus-shaped bacterium that was isolated from From cystitis.

coccus-shaped anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 92829

KCTC 15020,ATCC 15794,ATCC 14904,NCTC 11804,DSM 20470,CCUG 17636,LMG 22735,KCTC 5154,JCM 1766

@ref 20215

Last LPSN update 2026-05-29 08:29:08

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Tissierellales

Family Peptoniphilaceae

Genus Finegoldia

Species Finegoldia magna

Full scientific name Finegoldia magna (Prévot 1933) Murdoch and Shah 2000

Synonyms (3)

Peptococcus magnus
"Diplococcus magnus"
Peptostreptococcus magnus

BacDive ID	Other strains from **Finegoldia magna** (19)	Type strain
17984	F. magna 0168, DSM 20362
17985	F. magna 4008/2, DSM 20369
17987	F. magna CCUG 12548, DSM 20472, ATCC 29328, WAL 2508, ...
141695	F. magna CCUG 4947, ATCC 14955, JCM 6491
142430	F. magna CCUG 12461
142448	F. magna CCUG 12547, ATCC 14956, JCM 6489, LMG 12226
148257	F. magna CCUG 35115
150267	F. magna CCUG 39439
150720	F. magna CCUG 42050
150764	F. magna CCUG 42242
151525	F. magna CCUG 44220
151539	F. magna CCUG 44257
152382	F. magna CCUG 46593, CCM 3785
154671	F. magna CCUG 54800
154725	F. magna CCUG 54993
155663	F. magna CCUG 58756
155874	F. magna CCUG 59495
155877	F. magna CCUG 59508
156133	F. magna CCUG 60493

Morphology

Cell morphology

@ref	Cell shape	Gram stain
67771	coccus-shaped
67771	pleomorphic-shaped
67771		positive

Colony morphology

46640

Incubation period1 day

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
8841	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)		Medium recipe at MediaDive	Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water
8841	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

Culture temp

@ref	Growth	Type	Temperature (°C)
8841	positive	growth	37
67770	positive	growth	37
67771	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
8841	anaerobe
46640	anaerobe
67771	anaerobe
125438	anaerobe	93.429
125439	facultative anaerobe	91.083

Spore formation

@ref	Spore formation	Confidence
67771
125439		92.895

Murein

@ref	Murein short key	Type
8841	A12.01	A3alpha' L-Lys-Gly

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68380	29016 ChEBI	arginine	+	hydrolysis	from API rID32A
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68380	35581 ChEBI	indole	-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
68380	alkaline phosphatase	+	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68380	alpha-glucosidase	-	3.2.1.20	from API rID32A
68380	arginine dihydrolase	+	3.5.3.6	from API rID32A
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glycin arylamidase	+		from API rID32A
68380	leucine arylamidase	+	3.4.11.1	from API rID32A
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68380	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32A
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	+		from API rID32A
68380	urease	-	3.5.1.5	from API rID32A

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
8841	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+/-	+/-	+	+	+	+	+	+	+	-	+
8841	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	+	-	+	+	+	+	+	-	+	-

Isolation, sampling and environmental information

Isolation

@ref	Sample type
67771	From cystitis
8841	unknown source of isolation

Taxonmaps

69479

Global distribution of 16S sequence AB640691 (>99% sequence identity) for Finegoldia magna subclade from Microbeatlas

Aquatic Samples	3898
Soil Samples	2103
Animal Samples	101814
Plant Samples	761
Total Samples	108576

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8841	2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM2073132v1 assembly for Finegoldia magna FDAARGOS_1593	contig	GCA_020731325	1260.190	8076059416	1260	75.87
124043	ASM3953487v1 assembly for Finegoldia magna JCM 1766	scaffold	GCA_039534875			1260	65.01
66792	ASM318207v1 assembly for Finegoldia magna DSM 20470	scaffold	GCA_003182075	1260.23	2770939564	1260	64.23
66792	RUMC2-1.0 assembly for Peptoniphilaceae bacterium	contig	GCA_910589545	1891242.9	8000853482	1891242	44.83
66792	DSM20470-RUMC-1.0 assembly for Peptoniphilaceae bacterium	contig	GCA_910589735	1891242.11		1891242	42.28
66792	RUMC1-1.0 assembly for Peptoniphilaceae bacterium	scaffold	GCA_910589715	1891242.10		1891242	8.42

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
8841	Finegoldia magna gene for 16S ribosomal RNA, partial sequence	D14149	1365	1260
67770	Finegoldia magna gene for 16S ribosomal RNA, partial sequence, strain: JCM 1766	AB640691	1483	1260
67770	Finegoldia magna strain CCUG 17636 16S ribosomal RNA gene, partial sequence	AF542227	1409	1260
124043	Finegoldia magna strain JCM 1766 16S ribosomal RNA gene, partial sequence.	MH201143	950	1260

GC content

@ref	GC-content (mol%)	Method
8841	32.0
67770	32	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM2073132v1 assembly for Finegoldia magna FDAARGOS_1593
NCBI: GCA_020731325

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	91.08	no
125439	motility	BacteriaNetⓘ	no	64.02	no
125439	gram_stain	BacteriaNetⓘ	positive	61.68	no
125439	spore_formation	BacteriaNetⓘ	no	92.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Finegoldia magna DSM 20470
NCBI: GCA_003182075.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	83.35	no
125438	anaerobic	anaerobicⓘ	yes	93.43	yes
125438	aerobic	aerobicⓘ	no	98.21	no
125438	spore-forming	spore-formingⓘ	no	71.15	yes
125438	thermophilic	thermophileⓘ	no	95.39	yes
125438	flagellated	motile2+ⓘ	no	88.43	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Gram-positive anaerobic cocci guard skin homeostasis by regulating host-defense mechanisms.	van der Krieken DA, Rikken G, Ederveen THA, Jansen PAM, Rodijk-Olthuis D, Meesters LD, van Vlijmen-Willems IMJJ, van Cranenbroek B, van der Molen RG, Schalkwijk J, van den Bogaard EH, Zeeuwen PLJM.	iScience	10.1016/j.isci.2023.106483	2023
Genetics	TransDiscovery: Discovering Biotransformation from Human Microbiota by Integrating Metagenomic and Metabolomic Data.	Yan D, Cao L, Zhou M, Mohimani H.	Metabolites	10.3390/metabo12020119	2022
Pathogenicity	Cationic Intrinsically Disordered Antimicrobial Peptides (CIDAMPs) Represent a New Paradigm of Innate Defense with a Potential for Novel Anti-Infectives.	Latendorf T, Gerstel U, Wu Z, Bartels J, Becker A, Tholey A, Schroder JM.	Sci Rep	10.1038/s41598-019-39219-w	2019
Phylogeny	A primary assessment of the endophytic bacterial community in a xerophilous moss (Grimmia montana) using molecular method and cultivated isolates.	Liu XL, Liu SL, Liu M, Kong BH, Liu L, Li YH.	Braz J Microbiol	10.1590/s1517-83822014000100022	2014
Enzymology	Identification of oral peptostreptococcus isolates by PCR-restriction fragment length polymorphism analysis of 16S rRNA genes.	Riggio MP, Lennon A.	J Clin Microbiol	10.1128/jcm.41.9.4475-4479.2003	2003
Phylogeny	Biodiversity of Bacteria Associated with Eight Pleurotus ostreatus (Fr.) P. Kumm. Strains from Poland, Japan and the USA.	Adamski M, Pietr SJ.	Pol J Microbiol	10.21307/pjm-2019-009	2019
Pathogenicity	An in vitro comparison of two silver-containing antimicrobial wound dressings .	Hooper SJ, Williams DW, Thomas DW, Hill KE, Percival SL	Ostomy Wound Manage		2012
	Anaerococcus ihuae sp. nov. and Mediannikoviicoccus vaginalis gen. nov., sp. nov., two new bacteria isolated from human vaginal samples.	Ly C, Abou Chacra L, Birsal E, Haddad G, Lo CI, Amstrong N, Alibar S, Courbiere B, Bretelle F, Fenollar F.	Arch Microbiol	10.1007/s00203-022-03082-7	2022

References

#8841	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20470
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#46640	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 17636
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67771	Korean Collection for Type Cultures (KCTC) ; Curators of the KCTC;
#68380	Automatically annotated from API rID32A .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Finegoldia magna (DSM 20470, ATCC 15794, CCUG 17636)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Murein

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API rID32A

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_020731325

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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