Cite this strain

Finegoldia magna (CCUG 54800)

Name: Finegoldia magna (CCUG 54800)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 154671

Type strain

Culture col. no. CCUG 54800

NCBI tax ID(s) 1260

Special Collections CCUG

Links

Finegoldia magna CCUG 54800 is an anaerobe, mesophilic prokaryote that was isolated from Human synovial fluid,56-yr-old patient.

anaerobe mesophilic genome sequence

Name and taxonomic classification

SI-ID 409061

CCUG 54800

@ref 20215

Last LPSN update 2025-12-16 10:07:07

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Tissierellales

Family Peptoniphilaceae

Genus Finegoldia

Species Finegoldia magna

Full scientific name Finegoldia magna (Prévot 1933) Murdoch and Shah 2000

Synonyms (3)

Peptococcus magnus
"Diplococcus magnus"
Peptostreptococcus magnus

BacDive ID	Other strains from **Finegoldia magna** (19)	Type strain
17986	F. magna 2974, DSM 20470, ATCC 15794, CCUG 17636, ... (type strain)
17984	F. magna 0168, DSM 20362
17985	F. magna 4008/2, DSM 20369
17987	F. magna CCUG 12548, DSM 20472, ATCC 29328, WAL 2508, ...
141695	F. magna CCUG 4947, ATCC 14955, JCM 6491
142430	F. magna CCUG 12461
142448	F. magna CCUG 12547, ATCC 14956, JCM 6489, LMG 12226
148257	F. magna CCUG 35115
150267	F. magna CCUG 39439
150720	F. magna CCUG 42050
150764	F. magna CCUG 42242
151525	F. magna CCUG 44220
151539	F. magna CCUG 44257
152382	F. magna CCUG 46593, CCM 3785
154725	F. magna CCUG 54993
155663	F. magna CCUG 58756
155874	F. magna CCUG 59495
155877	F. magna CCUG 59508
156133	F. magna CCUG 60493

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
60334	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
60334	anaerobe
125438	anaerobe	93.009
125439	obligate anaerobe	95.8

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68380	29016 ChEBI	arginine	+	hydrolysis	from API rID32A
68381	29016 ChEBI	arginine	-	hydrolysis	from API rID32STR
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68380	16024 ChEBI	D-mannose	-	fermentation	from API rID32A
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68380	29985 ChEBI	L-glutamate	-	degradation	from API rID32A
68381	17716 ChEBI	lactose	-	builds acid from	from API rID32STR
68381	17306 ChEBI	maltose	-	builds acid from	from API rID32STR
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68381	320055 ChEBI	methyl beta-D-glucopyranoside	-	builds acid from	from API rID32STR
68380	17632 ChEBI	nitrate	-	reduction	from API rID32A
68381	27941 ChEBI	pullulan	-	builds acid from	from API rID32STR
68380	16634 ChEBI	raffinose	-	fermentation	from API rID32A
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68381	17992 ChEBI	sucrose	-	builds acid from	from API rID32STR
68381	27082 ChEBI	trehalose	-	builds acid from	from API rID32STR
68380	27897 ChEBI	tryptophan	-	energy source	from API rID32A
68380	16199 ChEBI	urea	-	hydrolysis	from API rID32A
68381	16199 ChEBI	urea	+	hydrolysis	from API rID32STR

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR
68380	35581 ChEBI	indole		from API rID32A

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Indole test
68381	15688 ChEBI	acetoin	-		from API rID32STR
68380	35581 ChEBI	indole		-	from API rID32A

Enzymes

@ref	Value	Activity	Ec
68380	alanine arylamidase	+	3.4.11.2	from API rID32A
68381	Alanyl-Phenylalanyl-Proline arylamidase	-		from API rID32STR
68381	alkaline phosphatase	+	3.1.3.1	from API rID32STR
68380	alkaline phosphatase	+	3.1.3.1	from API rID32A
68380	alpha-arabinosidase	-	3.2.1.55	from API rID32A
68380	alpha-fucosidase	-	3.2.1.51	from API rID32A
68381	alpha-galactosidase	-	3.2.1.22	from API rID32STR
68380	alpha-galactosidase	-	3.2.1.22	from API rID32A
68380	alpha-glucosidase	-	3.2.1.20	from API rID32A
68381	arginine dihydrolase	-	3.5.3.6	from API rID32STR
68380	arginine dihydrolase	+	3.5.3.6	from API rID32A
68380	beta-galactosidase	-	3.2.1.23	from API rID32A
68381	beta-galactosidase	-	3.2.1.23	from API rID32STR
68380	beta-Galactosidase 6-phosphate	-		from API rID32A
68381	beta-glucosidase	-	3.2.1.21	from API rID32STR
68380	beta-glucosidase	-	3.2.1.21	from API rID32A
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68380	beta-glucuronidase	-	3.2.1.31	from API rID32A
68381	beta-mannosidase	-	3.2.1.25	from API rID32STR
68380	glutamate decarboxylase	-	4.1.1.15	from API rID32A
68380	glutamyl-glutamate arylamidase	-		from API rID32A
68380	glycin arylamidase	+		from API rID32A
68381	glycyl tryptophan arylamidase	-		from API rID32STR
68380	histidine arylamidase	+		from API rID32A
68380	L-arginine arylamidase	+		from API rID32A
68380	leucine arylamidase	+	3.4.11.1	from API rID32A
68380	leucyl glycin arylamidase	+	3.4.11.1	from API rID32A
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68380	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32A
68380	phenylalanine arylamidase	-		from API rID32A
68380	proline-arylamidase	-	3.4.11.5	from API rID32A
68380	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32A
68381	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32STR
68380	serine arylamidase	+		from API rID32A
68380	tryptophan deaminase	-	4.1.99.1	from API rID32A
68380	tyrosine arylamidase	-		from API rID32A
68381	urease	+	3.5.1.5	from API rID32STR
68380	urease	-	3.5.1.5	from API rID32A

API rID32A

@ref	URE	ADH (Arg)	alpha GAL	beta GAL	beta-Galactosidase 6-phosphatebeta GP	alpha GLU	beta GLU	alpha ARA	beta GUR	beta-N-Acetyl-beta-glucosaminidasebeta NAG	MNE	RAF	GDC	alpha FUC	Reduction of nitrateNIT	IND	PAL	L-arginine arylamidaseArgA	ProA	LGA	Phenylalanine arylamidasePheA	Leucine arylamidaseLeuA	PyrA	Tyrosine arylamidaseTyrA	Alanine arylamidaseAlaA	Glycin arylamidaseGlyA	Histidine arylamidaseHisA	Glutamyl-glutamate arylamidaseGGA	Serine arylamidaseSerA
60334	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	+	-	+	+	-	+	+	+	-	+

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
60334	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body Product	#Fluids	#Synovial fluid
#Infection	#Patient	-

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
60334	Human synovial fluid,56-yr-old patient	2007-05-03	Göteborg	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
66792	ASM224309v1 assembly for Finegoldia magna CCUG 54800	contig	GCA_002243095	1260.9	1260	65.21

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Finegoldia magna CCUG 54800
NCBI: GCA_002243095

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	78.50	no
125439	motility	BacteriaNetⓘ	no	56.90	no
125439	gram_stain	BacteriaNetⓘ	positive	82.10	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	95.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Finegoldia magna strain CCUG 54800
PATRIC: 1260.9

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	84.07	no
125438	anaerobic	anaerobicⓘ	yes	93.01	yes
125438	spore-forming	spore-formingⓘ	no	68.41	no
125438	aerobic	aerobicⓘ	no	97.75	yes
125438	thermophilic	thermophileⓘ	no	96.29	yes
125438	flagellated	motile2+ⓘ	no	87.10	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Finegoldia magna Isolated from Orthopedic Joint Implant-Associated Infections.	Soderquist B, Bjorklund S, Hellmark B, Jensen A, Bruggemann H.	J Clin Microbiol	10.1128/jcm.00866-17	2017
Genetics	Pan-genome analysis of the genus Finegoldia identifies two distinct clades, strain-specific heterogeneity, and putative virulence factors.	Bruggemann H, Jensen A, Nazipi S, Aslan H, Meyer RL, Poehlein A, Brzuszkiewicz E, Al-Zeer MA, Brinkmann V, Soderquist B.	Sci Rep	10.1038/s41598-017-18661-8	2018

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#60334	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 54800
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68380	Automatically annotated from API rID32A .
#68381	Automatically annotated from API rID32STR .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Finegoldia magna (CCUG 54800)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API rID32A

API rID32STR

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_002243095

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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