Finegoldia magna (DSM 20369, 4008/2)

Name: Finegoldia magna (DSM 20369, 4008/2)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 17985

Type strain

Strain Designation 4008/2

Culture col. no. DSM 20369 4008/2

NCBI tax ID(s) 1260

Special Collections DSMZ

History DSMZ <- H. Werner, 4008/2 (Peptococcus variabilis)

Links

Finegoldia magna 4008/2 is an anaerobe bacterium that was isolated from pathological material.

anaerobe genome sequence Bacteria

Name and taxonomic classification

SI-ID 49614

DSM 20369

@ref 20215

Last LPSN update 2026-05-29 08:29:08

Domain Bacteria

Phylum Bacillota

Class Clostridia

Order Tissierellales

Family Peptoniphilaceae

Genus Finegoldia

Species Finegoldia magna

Full scientific name Finegoldia magna (Prévot 1933) Murdoch and Shah 2000

Synonyms (3)

Peptococcus magnus
"Diplococcus magnus"
Peptostreptococcus magnus

BacDive ID	Other strains from **Finegoldia magna** (19)	Type strain
17986	F. magna 2974, DSM 20470, ATCC 15794, CCUG 17636, ... (type strain)
17984	F. magna 0168, DSM 20362
17987	F. magna CCUG 12548, DSM 20472, ATCC 29328, WAL 2508, ...
141695	F. magna CCUG 4947, ATCC 14955, JCM 6491
142430	F. magna CCUG 12461
142448	F. magna CCUG 12547, ATCC 14956, JCM 6489, LMG 12226
148257	F. magna CCUG 35115
150267	F. magna CCUG 39439
150720	F. magna CCUG 42050
150764	F. magna CCUG 42242
151525	F. magna CCUG 44220
151539	F. magna CCUG 44257
152382	F. magna CCUG 46593, CCM 3785
154671	F. magna CCUG 54800
154725	F. magna CCUG 54993
155663	F. magna CCUG 58756
155874	F. magna CCUG 59495
155877	F. magna CCUG 59508
156133	F. magna CCUG 60493

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
8624	PYG MEDIUM (MODIFIED) (DSMZ Medium 104)		Medium recipe at MediaDive	Name: PYG MEDIUM (modified) (DSMZ Medium 104) Composition: Yeast extract 10.0 g/l Peptone 5.0 g/l Trypticase peptone 5.0 g/l Beef extract 5.0 g/l Glucose 5.0 g/l L-Cysteine HCl x H2O 0.5 g/l NaHCO3 0.4 g/l NaCl 0.08 g/l K2HPO4 0.04 g/l KH2PO4 0.04 g/l MgSO4 x 7 H2O 0.02 g/l CaCl2 x 2 H2O 0.01 g/l Hemin 0.005 g/l Ethanol 0.0038 g/l Resazurin 0.001 g/l Tween 80 Vitamin K1 NaOH Distilled water
8624	COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)		Medium recipe at MediaDive	Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

Culture temp

@ref	Growth	Type	Temperature (°C)
8624	positive	growth	37

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
8624	anaerobe
125438	anaerobe	93.906
125439	obligate anaerobe	96.441

Murein

@ref	Murein short key	Type
8624	A12.01	A3alpha' L-Lys-Gly

Isolation, sampling and environmental information

Isolation source categories

Cat1
#Host Body-Site

Isolation

8624

Sample typepathological material

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
8624	2	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	Finegoldia magna strain FDAARGOS_1556	complete		1260.197		1260	99.26
124043	ASM2073606v1 assembly for Finegoldia magna FDAARGOS_1556	complete	GCA_020736065	1260.192	8076051764	1260	98.04

GC content

8624

GC-content (mol%)32.3

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Finegoldia magna strain FDAARGOS_1556
BV-BRC: 1260.197

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate anaerobe	96.44	no
125439	gram_stain	BacteriaNetⓘ	positive	78.05	no
125439	spore_formation	BacteriaNetⓘ	no	70.86	no
125439	motility	BacteriaNetⓘ	no	85.66	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Finegoldia magna strain FDAARGOS_1556
PATRIC: 1260.197

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	84.09	no
125438	anaerobic	anaerobicⓘ	yes	93.91	no
125438	spore-forming	spore-formingⓘ	no	72.12	no
125438	aerobic	aerobicⓘ	no	97.58	yes
125438	thermophilic	thermophileⓘ	no	95.02	yes
125438	flagellated	motile2+ⓘ	no	87.81	no

Literature

References

#8624	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20369
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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