Microtetraspora glauca (DSM 43311, ATCC 23057, IAM 14286)

Name: Microtetraspora glauca (DSM 43311, ATCC 23057, IAM 14286)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16531

Type strain

Strain Designation E 63, T 158

Culture col. no. DSM 43311 ATCC 23057 IAM 14286 JCM 3300 KCC A-0134 16 more

NCBI tax ID(s) 1996

Special Collections DSMZ JCM KCTC

Links

Microtetraspora glauca E 63 is a mesophilic prokaryote that was isolated from soil.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 62897

ATCC 23057,DSM 43311,IAM 14286,JCM 3300,CCRC 12445,IFO 14761,IMET 9532,NCIMB 13268,NRRL B-3735,VKM Ac-663,IFO 15915,CBS 624.67,CECT 3300,KCTC 9272,NBRC 14761,NBRC 15915,BCRC 12445,KACC 20035,NBIMCC 1476

@ref 20215

Last LPSN update 2025-12-16 09:50:52

Domain Bacillati

Phylum Actinomycetota

Class Actinomycetes

Order Streptosporangiales

Family Streptosporangiaceae

Genus Microtetraspora

Species Microtetraspora glauca

Full scientific name Microtetraspora glauca Thiemann et al. 1968 (Approved Lists 1980)

BacDive ID	Other strains from **Microtetraspora glauca** (1)	Type strain
128642	M. glauca ST033377(HKI),

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	positive	99

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
10947	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10947	GYM+S MEDIUM (DSMZ Medium 214)	Medium recipe at MediaDive	Name: GYM+S MEDIUM (DSMZ Medium 214) Composition: Starch 20.0 g/l Agar 12.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10947	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
10947	positive	growth	37	mesophilic
67770	positive	growth	28	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	96.8

Observation

67770

Observationquinones: MK-9(H₄), MK-9(H₂), MK-9(H₆), MK-9(III,VIII-H₄), MK-9(H₂), MK-9

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
10947	soil	Italy	ITA	Europe
67770	Soil

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10947	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM157038v1 assembly for Microtetraspora glauca NBRC 14761	scaffold	GCA_001570385	1996.4	2724679247	1996	39.75
124043	ASM72127v1 assembly for Microtetraspora glauca NRRL B-3735	contig	GCA_000721275	1996.3	2772190673	1996

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	M.glauca 16S rRNA gene	X97891	1449	1996
20218	Microtetraspora glauca gene for 16S ribosomal RNA, partial sequence	D85490	1475	1996
20218	Microtetraspora glauca 16S rRNA gene	U48974	1416	1996

GC content

@ref	GC-content (mol%)	Method
67770	70.2	genome sequence analysis
67770	66	thermal denaturation, midpoint method (Tm)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Microtetraspora glauca NBRC 14761
NCBI: GCA_001570385

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	67.90	no
125439	motility	BacteriaNetⓘ	no	84.50	no
125439	gram_stain	BacteriaNetⓘ	positive	99.00	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	96.80	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Microtetraspora glauca strain NBRC 14761
PATRIC: 1996.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	87.69	no
125438	anaerobic	anaerobicⓘ	no	91.20	no
125438	spore-forming	spore-formingⓘ	yes	89.10	no
125438	aerobic	aerobicⓘ	yes	84.32	no
125438	thermophilic	thermophileⓘ	no	87.63	yes
125438	flagellated	motile2+ⓘ	no	88.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Transduction of plasmid DNA in Streptomyces spp. and related genera by bacteriophage FP43.	McHenney MA, Baltz RH.	J Bacteriol	10.1128/jb.170.5.2276-2282.1988	1988
Metabolism	Denitrification by actinomycetes and purification of dissimilatory nitrite reductase and azurin from Streptomyces thioluteus.	Shoun H, Kano M, Baba I, Takaya N, Matsuo M.	J Bacteriol	10.1128/jb.180.17.4413-4415.1998	1998
Genetics	Rubber Degrading Strains: Microtetraspora and Dactylosporangium.	Basik AA, Nanthini J, Yeo TC, Sudesh K.	Polymers (Basel)	10.3390/polym13203524	2021
	MAR4 Streptomyces: A Unique Resource for Natural Product Discovery.	Sweeney D, Chase AB, Bogdanov A, Jensen PR.	J Nat Prod	10.1021/acs.jnatprod.3c01007	2024
Phylogeny	Phylogenetic analysis reveals new relationships among members of the genera Microtetraspora and Microbispora.	Wang Y, Zhang Z, Ruan J.	Int J Syst Bacteriol	10.1099/00207713-46-3-658	1996
Enzymology	Terminal phenylalanine and tyrosine biosynthesis of Microtetraspora glauca.	Speth AR, Hund HK, Lingens F.	Biol Chem Hoppe Seyler	10.1515/bchm3.1989.370.1.591	1989
	Crystal structure of nickel-containing superoxide dismutase reveals another type of active site.	Wuerges J, Lee JW, Yim YI, Yim HS, Kang SO, Djinovic Carugo K.	Proc Natl Acad Sci U S A	10.1073/pnas.0308514101	2004
Genetics	Genome-Based Taxonomic Classification of the Phylum Actinobacteria.	Nouioui I, Carro L, Garcia-Lopez M, Meier-Kolthoff JP, Woyke T, Kyrpides NC, Pukall R, Klenk HP, Goodfellow M, Goker M.	Front Microbiol	10.3389/fmicb.2018.02007	2018
Pathogenicity	Structure of ribosome-bound azole-modified peptide phazolicin rationalizes its species-specific mode of bacterial translation inhibition.	Travin DY, Watson ZL, Metelev M, Ward FR, Osterman IA, Khven IM, Khabibullina NF, Serebryakova M, Mergaert P, Polikanov YS, Cate JHD, Severinov K.	Nat Commun	10.1038/s41467-019-12589-5	2019
Genetics	Phylogenomic Analysis of Natural Products Biosynthetic Gene Clusters Allows Discovery of Arseno-Organic Metabolites in Model Streptomycetes.	Cruz-Morales P, Kopp JF, Martinez-Guerrero C, Yanez-Guerra LA, Selem-Mojica N, Ramos-Aboites H, Feldmann J, Barona-Gomez F.	Genome Biol Evol	10.1093/gbe/evw125	2016
Genetics	Computational Identification of Repeat-Containing Proteins and Systems.	Altae-Tran H, Gao L, Strecker J, Macrae RK, Zhang F.	QRB Discov	10.1017/qrd.2020.14	2020
Enzymology	Purification and N-terminal amino-acid sequences of bacterial malate dehydrogenases from six actinomycetales strains and from Phenylobacterium immobile, strain E.	Rommel TO, Hund HK, Speth AR, Lingens F	Biol Chem Hoppe Seyler	10.1515/bchm3.1989.370.2.763	1989

References

#10947	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43311
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Microtetraspora glauca (DSM 43311, ATCC 23057, IAM 14286)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001570385

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

Help

Social Media