Name: Microtetraspora glauca E 63
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 16531

Type strain:

Species: Microtetraspora glauca

Strain Designation: E 63, T 158

Culture col. no.: DSM 43311, ATCC 23057, IAM 14286, JCM 3300, KCC A-0134, BCRC 12445, CBS 624.67, CECT 3300, IFO 14761, IMET 9532, IMSNU 20092, KACC 20035, KCTC 9272, NBIMCC 1476, NBRC 14761, NCIMB 13268, NRRL B-3735, RIA 925, VKM Ac-663

Strain history: KCC A-0300 <-- ATCC 23057 <-- J. E. Thiemann T/158.

NCBI tax ID(s): 1996 (species)

SI-ID 62897

ATCC 23057, DSM 43311, IAM 14286, JCM 3300, CCRC 12445, IFO 14761, IMET 9532, NCIMB 13268, NRRL B-3735, VKM Ac-663, IFO 15915, CBS 624.67, CECT 3300, KCTC 9272, NBRC 14761, NBRC 15915, BCRC 12445, KACC 20035, NBIMCC 1476

Special Collections

Other strains from Microtetraspora glauca

Section

Microtetraspora glauca E 63 is a spore-forming bacterium that was isolated from soil.

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Streptosporangiales*
	Family	*Streptosporangiaceae*
	Genus	*Microtetraspora*
	Species	**Microtetraspora glauca**
	Full Scientific Name (LPSN)	Microtetraspora glauca Thiemann et al. 1968 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10947]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #10947]

Culture medium growth

[Ref.: #10947]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10947]

Culture medium composition

expand / minimize

[Ref.: #10947]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #10947]

Culture medium growth

[Ref.: #10947]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10947]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #10947]			growth	37 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-9(H₄), MK-9(H₂), MK-9(H₆), MK-9(III,VIII-H₄), MK-9(H₂), MK-9

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10947]	Sample type/isolated from	soil
[Ref.: #10947]	Country	Italy
[Ref.: #10947]	Country ISO 3 Code	ITA
[Ref.: #10947]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Soil
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #10947]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	M.glauca 16S rRNA gene	X97891	1449	GenBank ENA	1996 tax ID	*
[Ref.: #20218]	Microtetraspora glauca gene for 16S ribosomal RNA, partial sequence	D85490	1475	GenBank ENA	1996 tax ID	*
[Ref.: #20218]	Microtetraspora glauca 16S rRNA gene	U48974	1416	GenBank ENA	1996 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Microtetraspora glauca NBRC 14761	GCA_001570385	scaffold	GenBank ENA	1996 tax ID
[Ref.: #66792]	Microtetraspora glauca strain NBRC 14761	1996.4	wgs	PATRIC	1996 tax ID	*
[Ref.: #66792]	Microtetraspora glauca NBRC 14761	2724679247	draft	JGI IMG/M	1996 tax ID	*

[Ref.: #67770]	GC-content	70.2 mol%	genome sequence analysis
[Ref.: #67770]	GC-content	66 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Microtetraspora glauca strain NBRC 14761 PATRIC: 1996.4
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	87.689	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	91.197	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	89.101	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	84.318	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	87.631	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	88.5	no

Availability in culture collections External links

[Ref.: #10947]

Culture collection no.

DSM 43311, ATCC 23057, IAM 14286, JCM 3300, KCC A-0134, BCRC 12445, CBS 624.67, CECT 3300, IFO 14761, IMET 9532, IMSNU 20092, KACC 20035, KCTC 9272, NBIMCC 1476, NBRC 14761, NCIMB 13268, NRRL B-3735, RIA 925, VKM Ac-663

[Ref.: #85562]

SI-ID 62897

Literature:

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Purification and N-terminal amino-acid sequences of bacterial malate dehydrogenases from six actinomycetales strains and from Phenylobacterium immobile, strain E.	Rommel TO, Hund HK, Speth AR, Lingens F	Biol Chem Hoppe Seyler	10.1515/bchm3.1989.370.2.763	1989	*

References

#10947

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43311

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#85562

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID62897.1 )

* These data were automatically processed and therefore are not curated

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Microtetraspora glauca strain NBRC 14761

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