Strain identifier

BacDive ID: 16531

Type strain: Yes

Species: Microtetraspora glauca

Strain Designation: E 63, T 158

Culture col. no.: DSM 43311, ATCC 23057, IAM 14286, JCM 3300, KCC A-0134

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 10947

BacDive-ID: 16531

DSM-Number: 43311

keywords: Bacteria, 16S sequence, genome sequence, mesophilic

description: Microtetraspora glauca E 63 is a mesophilic bacterium that was isolated from soil.

strain history: <- S.T. Williams, E 63 <- ATCC <- J.E. Thiemann, T 158

doi: 10.13145/bacdive16531.20201210.5

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinobacteria
  • domain: Bacteria
  • phylum: Actinobacteria
  • class: Actinobacteria
  • order: Streptosporangiales
  • family: Streptosporangiaceae
  • genus: Microtetraspora
  • species: Microtetraspora glauca
  • full scientific name: Microtetraspora glauca Thiemann et al. 1968 (Approved Lists 1980)

@ref: 10947

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptosporangiaceae

genus: Microtetraspora

species: Microtetraspora glauca

full scientific name: Microtetraspora glauca Thiemann et al. 1968 emend. Nouioui et al. 2018

strain designation: E 63, T 158

type strain: yes

Culture and growth conditions

culture medium

  • @ref: 10947
  • name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)
  • growth: yes
  • link: https://www.dsmz.de/microorganisms/medium/pdf/DSMZ_Medium65.pdf

culture temp

  • @ref: 10947
  • growth: positive
  • type: growth
  • temperature: 37
  • range: mesophilic

Isolation, sampling and environmental information

isolation

  • @ref: 10947
  • sample type: soil
  • country: Italy
  • origin.country: ITA
  • continent: Europe

isolation source categories

  • Cat1: #Environmental
  • Cat2: #Terrestrial
  • Cat3: #Soil

Safety information

risk assessment

  • @ref: 10947
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218M.glauca 16S rRNA geneX978911449ena1996
20218Microtetraspora glauca gene for 16S ribosomal RNA, partial sequenceD854901475ena1996
20218Microtetraspora glauca 16S rRNA geneU489741416ena1996
20218Sphingomonas sp. gene for 16S rRNA, partial sequence, strain:IFO 15915AB0339491416ena28214
20218Sphingomonas sp. NBRC 15915 gene for 16S rRNA, partial sequenceAB6809981414ena1113659

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Microtetraspora glauca NBRC 14761GCA_001570385scaffoldncbi1996
66792Microtetraspora glauca NRRL B-3735GCA_000721275contigncbi1996
66792Microtetraspora glauca strain NBRC 147611996.4wgspatric1996
66792Microtetraspora glauca strain NRRL B-37351996.3wgspatric1996

External links

@ref: 10947

culture collection no.: DSM 43311, ATCC 23057, IAM 14286, JCM 3300, KCC A-0134

straininfo link

@refpassport
20218http://www.straininfo.net/strains/168195
20218http://www.straininfo.net/strains/102308
20218http://www.straininfo.net/strains/168196
20218http://www.straininfo.net/strains/168197
20218http://www.straininfo.net/strains/168198

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
10947Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 43311)https://www.dsmz.de/collection/catalogue/details/culture/DSM-43311
20215D.Gleim, M.Kracht, N.Weiss et. al.http://www.dsmz.de/bacterial-diversity/prokaryotic-nomenclature-up-to-date.htmlProkaryotic Nomenclature Up-to-date - compilation of all names of Bacteria and Archaea, validly published according to the Bacteriological Code since 1. Jan. 1980, and validly published nomenclatural changes since
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)