Streptomyces thermospinosisporus (DSM 41779, JCM 11756, KCTC 9909)

Name: Streptomyces thermospinosisporus (DSM 41779, JCM 11756, KCTC 9909)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16374

Type strain

Strain Designation AT 10

Culture col. no. DSM 41779 JCM 11756 KCTC 9909 AT 10 NRRL B-24318 2 more

NCBI tax ID(s) 161482

Special Collections DSMZ JCM KCTC

History DSMZ <- S. B. Kim, Univ. Newcastle; AT 10 JCM <-- DSM 41779 <-- S. B. Kim AT10.

Links

Streptomyces thermospinosisporus AT 10 is a bacterium that was isolated from garden soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 100980

DSM 41779,KCTC 9909,JCM 11756,NBRC 100043,BCRC 16367,CCRC 16367,NRRL B-24318

@ref 20215

Last LPSN update 2026-05-29 08:28:46

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces thermospinosisporus

Full scientific name Streptomyces thermospinosisporus corrig. Kim and Goodfellow 2002

Synonyms (1)

Streptomyces thermospinisporus

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125439		96.216
125439		99.722	positive

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
10565	STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)	Medium recipe at MediaDive	Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water
10565	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10565	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)	Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
10565	GYM+S MEDIUM (DSMZ Medium 214)	Medium recipe at MediaDive	Name: GYM+S MEDIUM (DSMZ Medium 214) Composition: Starch 20.0 g/l Agar 12.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
10565	positive	growth	45
67770	positive	growth	45

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	98.705

Spore formation

@ref	Spore formation	Confidence
125439		92.648

Observation

67770

Observationquinones: MK-9(H₈)

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil
#Engineered	#Agriculture	#Garden

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
10565	garden soil	United Kingdom	GBR	Europe
67770	Garden soil	United Kingdom	GBR	Europe

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10565	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	NCBI tax ID	Score
124043	ASM3952642v1 assembly for Streptomyces thermospinosisporus JCM 11756	scaffold	GCA_039526425	161482	19.18

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
10565	Streptomyces sp. AT10 16S ribosomal RNA gene, partial sequence	AF333113	1522		161482
67770	Streptomyces thermospinosisporus gene for 16S rRNA, partial sequence, strain: NBRC 100043	AB249914	1455		161482

GC content

10565

GC-content (mol%)73.6

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM3952642v1 assembly for Streptomyces thermospinosisporus JCM 11756
NCBI: GCA_039526425

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	98.71	no
125439	motility	BacteriaNetⓘ	no	96.22	no
125439	gram_stain	BacteriaNetⓘ	positive	99.72	no
125439	spore_formation	BacteriaNetⓘ	yes	92.65	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces thermospinisporus sp. nov., a moderately thermophilic carboxydotrophic streptomycete isolated from soil.	Kim SB, Goodfellow M	Int J Syst Evol Microbiol	10.1099/00207713-52-4-1225	2002

References

#10565	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41779
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces thermospinosisporus (DSM 41779, JCM 11756, KCTC 9909)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_039526425

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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