Strain identifier
BacDive ID: 16374
Type strain:
Species: Streptomyces thermospinosisporus
Strain Designation: AT 10
Strain history: DSM 41779 <-- S. B. Kim AT10.
NCBI tax ID(s): 161482 (species)
General
@ref: 10565
BacDive-ID: 16374
DSM-Number: 41779
keywords: 16S sequence, Bacteria, thermophilic
description: Streptomyces thermospinosisporus AT 10 is a thermophilic bacterium that was isolated from garden soil.
NCBI tax id
- NCBI tax id: 161482
- Matching level: species
strain history
@ref | history |
---|---|
10565 | <- S. B. Kim, Univ. Newcastle; AT 10 |
67770 | DSM 41779 <-- S. B. Kim AT10. |
doi: 10.13145/bacdive16374.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/actinomycetota
- domain: Bacteria
- phylum: Actinomycetota
- class: Actinomycetes
- order: Kitasatosporales
- family: Streptomycetaceae
- genus: Streptomyces
- species: Streptomyces thermospinosisporus
- full scientific name: Streptomyces thermospinosisporus corrig. Kim and Goodfellow 2002
synonyms
- @ref: 20215
- synonym: Streptomyces thermospinisporus
@ref: 10565
domain: Bacteria
phylum: Actinobacteria
class: Actinobacteria
order: Actinomycetales
family: Streptomycetaceae
genus: Streptomyces
species: Streptomyces thermospinosisporus
full scientific name: Streptomyces thermospinosisporus Kim and Goodfellow 2002
strain designation: AT 10
type strain: yes
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
10565 | STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) | yes | https://mediadive.dsmz.de/medium/252 | Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water |
10565 | GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) | yes | https://mediadive.dsmz.de/medium/65 | Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
10565 | ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) | yes | https://mediadive.dsmz.de/medium/84 | Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water |
10565 | GYM+S MEDIUM (DSMZ Medium 214) | yes | https://mediadive.dsmz.de/medium/214 | Name: GYM+S MEDIUM (DSMZ Medium 214) Composition: Starch 20.0 g/l Agar 12.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
10565 | positive | growth | 45 | thermophilic |
67770 | positive | growth | 45 | thermophilic |
Physiology and metabolism
observation
- @ref: 67770
- observation: quinones: MK-9(H8)
Isolation, sampling and environmental information
isolation
@ref | sample type | country | origin.country | continent |
---|---|---|---|---|
10565 | garden soil | United Kingdom | GBR | Europe |
67770 | Garden soil | United Kingdom | GBR | Europe |
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Terrestrial | #Soil |
#Engineered | #Agriculture | #Garden |
Safety information
risk assessment
- @ref: 10565
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
@ref | description | accession | length | database | NCBI tax ID |
---|---|---|---|---|---|
10565 | Streptomyces sp. AT10 16S ribosomal RNA gene, partial sequence | AF333113 | 1522 | ena | 161482 |
67770 | Streptomyces thermospinosisporus gene for 16S rRNA, partial sequence, strain: NBRC 100043 | AB249914 | 1455 | ena | 161482 |
GC content
- @ref: 10565
- GC-content: 73.6
External links
@ref: 10565
culture collection no.: DSM 41779, JCM 11756, KCTC 9909, BCRC 16367, NBRC 100043, NRRL B-24318
straininfo link
- @ref: 85428
- straininfo: 100980
literature
- topic: Phylogeny
- Pubmed-ID: 12148632
- title: Streptomyces thermospinisporus sp. nov., a moderately thermophilic carboxydotrophic streptomycete isolated from soil.
- authors: Kim SB, Goodfellow M
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/00207713-52-4-1225
- year: 2002
- mesh: Bacterial Typing Techniques, Carbon Dioxide/metabolism, Carbon Monoxide/metabolism, DNA, Ribosomal/analysis, *Hot Temperature, Molecular Sequence Data, Nucleic Acid Hybridization, Phenotype, RNA, Ribosomal, 16S, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/isolation & purification/physiology
- topic2: Metabolism
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
10565 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41779) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-41779 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
85428 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID100980.1 | StrainInfo: A central database for resolving microbial strain identifiers |