Strain identifier

BacDive ID: 16374

Type strain: Yes

Species: Streptomyces thermospinosisporus

Strain Designation: AT 10

Strain history: DSM 41779 <-- S. B. Kim AT10.

NCBI tax ID(s): 161482 (species)

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General

@ref: 10565

BacDive-ID: 16374

DSM-Number: 41779

keywords: 16S sequence, Bacteria, thermophilic

description: Streptomyces thermospinosisporus AT 10 is a thermophilic bacterium that was isolated from garden soil.

NCBI tax id

  • NCBI tax id: 161482
  • Matching level: species

strain history

@refhistory
10565<- S. B. Kim, Univ. Newcastle; AT 10
67770DSM 41779 <-- S. B. Kim AT10.

doi: 10.13145/bacdive16374.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Kitasatosporales
  • family: Streptomycetaceae
  • genus: Streptomyces
  • species: Streptomyces thermospinosisporus
  • full scientific name: Streptomyces thermospinosisporus corrig. Kim and Goodfellow 2002
  • synonyms

    • @ref: 20215
    • synonym: Streptomyces thermospinisporus

@ref: 10565

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Streptomycetaceae

genus: Streptomyces

species: Streptomyces thermospinosisporus

full scientific name: Streptomyces thermospinosisporus Kim and Goodfellow 2002

strain designation: AT 10

type strain: yes

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
10565STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)yeshttps://mediadive.dsmz.de/medium/252Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 14.985 g/l Starch 9.99001 g/l (NH4)2SO4 1.998 g/l CaCO3 1.998 g/l K2HPO4 0.999001 g/l MgSO4 x 7 H2O 0.999001 g/l NaCl 0.999001 g/l FeSO4 x 7 H2O 0.000999001 g/l MnCl2 x 4 H2O 0.000999001 g/l ZnSO4 x 7 H2O 0.000999001 g/l Distilled water
10565GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
10565ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)yeshttps://mediadive.dsmz.de/medium/84Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
10565GYM+S MEDIUM (DSMZ Medium 214)yeshttps://mediadive.dsmz.de/medium/214Name: GYM+S MEDIUM (DSMZ Medium 214) Composition: Starch 20.0 g/l Agar 12.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
10565positivegrowth45thermophilic
67770positivegrowth45thermophilic

Physiology and metabolism

observation

  • @ref: 67770
  • observation: quinones: MK-9(H8)

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinent
10565garden soilUnited KingdomGBREurope
67770Garden soilUnited KingdomGBREurope

isolation source categories

Cat1Cat2Cat3
#Environmental#Terrestrial#Soil
#Engineered#Agriculture#Garden

Safety information

risk assessment

  • @ref: 10565
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
10565Streptomyces sp. AT10 16S ribosomal RNA gene, partial sequenceAF3331131522ena161482
67770Streptomyces thermospinosisporus gene for 16S rRNA, partial sequence, strain: NBRC 100043AB2499141455ena161482

GC content

  • @ref: 10565
  • GC-content: 73.6

External links

@ref: 10565

culture collection no.: DSM 41779, JCM 11756, KCTC 9909, BCRC 16367, NBRC 100043, NRRL B-24318

straininfo link

  • @ref: 85428
  • straininfo: 100980

literature

  • topic: Phylogeny
  • Pubmed-ID: 12148632
  • title: Streptomyces thermospinisporus sp. nov., a moderately thermophilic carboxydotrophic streptomycete isolated from soil.
  • authors: Kim SB, Goodfellow M
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/00207713-52-4-1225
  • year: 2002
  • mesh: Bacterial Typing Techniques, Carbon Dioxide/metabolism, Carbon Monoxide/metabolism, DNA, Ribosomal/analysis, *Hot Temperature, Molecular Sequence Data, Nucleic Acid Hybridization, Phenotype, RNA, Ribosomal, 16S, Sequence Analysis, DNA, *Soil Microbiology, Streptomyces/*classification/genetics/isolation & purification/physiology
  • topic2: Metabolism

Reference

@idauthorscataloguedoi/urltitle
10565Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 41779)https://www.dsmz.de/collection/catalogue/details/culture/DSM-41779
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
85428Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID100980.1StrainInfo: A central database for resolving microbial strain identifiers