Name: Rhodococcus sp. JCM 28295
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163483

Type strain:

Species: Rhodococcus sp.

Culture col. no.: JCM 28295

Strain history: T. Tateishi; Agency for Cultural Affairs, Japan <-- R. Kigawa and J. Sugiyama; Natl. Res. Inst. for Cult. Prop., Tokyo and TechnoSuruga Lab. Co., Ltd., Japan; T7426-14-1b.

NCBI tax ID(s): 1818715 (species)

Special Collections

Other strains from Rhodococcus sp.

Section

Rhodococcus sp. JCM 28295 is a prokaryote that was isolated from Black substances around the eastern area of the stone chamber exterior.

16S sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Genus	*Rhodococcus*
	Full Scientific Name (LPSN)	Rhodococcus Zopf 1891 (Approved Lists 1980)

	Synonym	Prescottella
	Synonym	"Rhodococcoides"
	Synonym	Spelaeibacter
	Synonym	"Prescottia"

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Black substances around the eastern area of the stone chamber exterior
[Ref.: #67770]	Geographic location (country and/or sea, region)	Takamatsuzuka Tumulus, Asuka Village, Nara Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence LC133642 (>99% sequence identity) for Rhodococcus from Microbeatlas

Aquatic Samples	116
Soil Samples	425
Animal Samples	152
Plant Samples	113
Total Samples	806

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Rhodococcus sp. JCM 28295 gene for 16S ribosomal RNA, partial sequence	LC133642	1510	GenBank ENA	1818715 tax ID

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 28295

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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