Name: Pediococcus pentosaceus JCM 2024
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162818

Type strain:

Species: Pediococcus pentosaceus

Culture col. no.: JCM 2024, TISTR 415

Strain history: C. Kaneuchi <-- K. Komagata <-- S. Tanasupawat N-37.

NCBI tax ID(s): 1255 (species)

SI-ID 63576

JCM 2024, TISTR 415

Special Collections

Other strains from Pediococcus pentosaceus

Section

Pediococcus pentosaceus JCM 2024 is a bacterium that was isolated from Phak-sain-dong .

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Pediococcus*
	Species	**Pediococcus pentosaceus**
	Full Scientific Name (LPSN)	Pediococcus pentosaceus Mees 1934 (Approved Lists 1980)

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Phak-sain-dong (pickled vegetables)
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence LC153551 (>99% sequence identity) for Pediococcus from Microbeatlas

Aquatic Samples	2228
Soil Samples	2103
Animal Samples	26184
Plant Samples	1535
Total Samples	32050

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pediococcus pentosaceus gene for 16S ribosomal RNA, partial sequence, strain: JCM 2024	LC153551	1518	GenBank ENA	1255 tax ID

[Ref.: #67770]

GC-content

37.5 mol%

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 2024, TISTR 415

[Ref.: #113626]

SI-ID 63576

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#113626

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID63576.1 )

* These data were automatically processed and therefore are not curated

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