Pediococcus pentosaceus (NISL 7109, NBRC 3892, IFO 3892)

Name: Pediococcus pentosaceus (NISL 7109, NBRC 3892, IFO 3892)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162938

Type strain

Culture col. no. NISL 7109 NBRC 3892 IFO 3892 IAM 12300 JCM 20459

NCBI tax ID(s) 1255

Special Collections JCM

Links

Pediococcus pentosaceus JCM 20459 is a mesophilic prokaryote that was isolated from Fermenting vegetable.

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 62596

IFO 3892,NBRC 3892,IAM 12300,JCM 20459

@ref 20215

Last LPSN update 2025-12-16 10:09:06

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Pediococcus

Species Pediococcus pentosaceus

Full scientific name Pediococcus pentosaceus Mees 1934 (Approved Lists 1980)

BacDive ID	Other strains from **Pediococcus pentosaceus** (40)	Type strain
6393	P. pentosaceus DSM 20336, ATCC 33316, NCDO 990, WDCM 00158, ... (type strain)
6388	P. pentosaceus 32, DSM 20206, ATCC 8081, CCM 1578, NCDO ...
6389	P. pentosaceus 243d, DSM 20280
6390	P. pentosaceus 260a, DSM 20281
6391	P. pentosaceus 247c, DSM 20283
6392	P. pentosaceus P. lin, DSM 20333, ATCC 33314, IFO 3884, ...
6394	P. pentosaceus Coster R 3, CCUG 28436, DSM 46292, CCM 822, ...
130992	P. pentosaceus JM-6755-f-WT, JM-80, DSM 28628
136079	P. pentosaceus CIP 102333
136495	P. pentosaceus CIP 54.91
136496	P. pentosaceus CIP 54.92, ATCC 10791, NCDO 814, NCTC 8066, ...
137006	P. pentosaceus 2001886, CIP 109663
137941	P. pentosaceus CIP 102244
143847	P. pentosaceus CCUG 21536, CCM 2483, ATCC 25745
145700	P. pentosaceus CCUG 29309
148603	P. pentosaceus CCUG 35694
149148	P. pentosaceus CCUG 36942
149342	P. pentosaceus CCUG 37545
149378	P. pentosaceus CCUG 37613
149422	P. pentosaceus CCUG 37701
149670	P. pentosaceus CCUG 38155
150415	P. pentosaceus CCUG 39851
150614	P. pentosaceus CCUG 41759
151859	P. pentosaceus CCUG 45064
152965	P. pentosaceus CCUG 48142
153377	P. pentosaceus CCUG 49383
162731	P. pentosaceus JCM 20076, IAM 1150
162816	P. pentosaceus JCM 2023, TISTR 414
162818	P. pentosaceus JCM 2024, TISTR 415
162831	P. pentosaceus JCM 2026
162843	P. pentosaceus JCM 2028
162847	P. pentosaceus JCM 2029
162855	P. pentosaceus JCM 2030
162865	P. pentosaceus JCM 2031
162869	P. pentosaceus JCM 20314, IAM 10073, IAM 12285
162932	P. pentosaceus JCM 20452, IAM 12293, IFO 3893, NBRC 3893, ...
162933	P. pentosaceus JCM 20453, IAM 12294
162936	P. pentosaceus JCM 20457, IAM 12298, NCDO 992
162937	P. pentosaceus JCM 20458, IAM 12299, NISL 7108
173384	P. pentosaceus 7837, CRBIP24.170

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	30	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

67770

Sample typeFermenting vegetable

Taxonmaps

69479

Global distribution of 16S sequence LC311738 (>99% sequence identity) for Pediococcus from Microbeatlas

Aquatic Samples	2228
Soil Samples	2103
Animal Samples	26184
Plant Samples	1535
Total Samples	32050

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Pediococcus pentosaceus gene for 16S ribosomal RNA, partial sequence, strain: JCM 20459	LC311738	1515		1255
124043	Pediococcus pentosaceus gene for 16S rRNA, partial sequence, strain: NBRC 3892.	AB680160	1501		1255

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Characterization of genomic DNA of lactic acid bacteria for activation of plasmacytoid dendritic cells.	Horie A, Tomita Y, Ohshio K, Fujiwara D, Fujii T.	BMC Microbiol	10.1186/s12866-019-1458-y	2019

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Pediococcus pentosaceus (NISL 7109, NBRC 3892, IFO 3892)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

Genome-based predictions

Literature

Literature

References

BacDive

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