Tetragenococcus halophilus (JCM 2019)

Name: Tetragenococcus halophilus (JCM 2019)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162805

Type strain

Culture col. no. JCM 2019

NCBI tax ID(s) 51669

Special Collections JCM

History JCM <-- C. Kaneuchi <-- K. Komagata <-- S. Tanasupawat Ph-137.

Links

Tetragenococcus halophilus JCM 2019 is a bacterium that was isolated from Pla-ra .

16S sequence Bacteria

Name and taxonomic classification

SI-ID 63572

JCM 2019

@ref 20215

Last LPSN update 2026-05-29 08:45:01

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Enterococcaceae

Genus Tetragenococcus

Species Tetragenococcus halophilus

Full scientific name Tetragenococcus halophilus (Mees 1934) Collins et al. 1993

Synonyms (1)

Pediococcus halophilus

BacDive ID	Other strains from **Tetragenococcus halophilus** (26)	Type strain
145984	T. halophilus CCUG 30089
147215	T. halophilus CCUG 33069
153369	T. halophilus CCUG 49357
153961	T. halophilus CCUG 51777
154280	T. halophilus CCUG 52959
154281	T. halophilus CCUG 52960
154317	T. halophilus CCUG 53046
154634	T. halophilus CCUG 54657
162452	T. halophilus JCM 19268
162453	T. halophilus JCM 19269
162790	T. halophilus JCM 2016, TISTR 346
162795	T. halophilus JCM 2017
162801	T. halophilus JCM 2018
162809	T. halophilus JCM 2020
162821	T. halophilus JCM 20246, IAM 1674, NISL 7118
162822	T. halophilus JCM 20247, IAM 1675, NISL 7126
162823	T. halophilus JCM 20249, IAM 1678, NISL 7116
162824	T. halophilus JCM 20250, ATCC 13622, IAM 1681
162825	T. halophilus JCM 20251, IAM 1682, NISL 7119
162826	T. halophilus JCM 20254, ATCC 13623, IAM 1685
162827	T. halophilus JCM 20255, IAM 1686, NISL 7120
162828	T. halophilus JCM 20256, ATCC 13624, IAM 1688
162829	T. halophilus JCM 20257, IAM 1689, NISL 7121
162830	T. halophilus JCM 20258, IAM 1692
162832	T. halophilus JCM 20260, IAM 1698, NISL 7123
162833	T. halophilus JCM 20261, IAM 1702, NISL 7125

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

67770

Sample typePla-ra (fermented fish)

Taxonmaps

69479

Global distribution of 16S sequence LC153550 (>99% sequence identity) for Tetragenococcus halophilus from Microbeatlas

Aquatic Samples	1678
Soil Samples	861
Animal Samples	20165
Plant Samples	532
Total Samples	23236

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Tetragenococcus halophilus gene for 16S ribosomal RNA, partial sequence, strain: JCM 2019	LC153550	1501		51669
124043	Tetragenococcus halophilus gene for 16S rRNA, partial sequence, strain: JCM 2019.	AB911541	1500		51669

GC content

67770

GC-content (mol%)36.5

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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