Tetragenococcus halophilus (CCUG 52960)

Name: Tetragenococcus halophilus (CCUG 52960)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 154281

Type strain

Culture col. no. CCUG 52960

NCBI tax ID(s) 51669

Special Collections CCUG

Links

Tetragenococcus halophilus CCUG 52960 is a microaerophile, mesophilic prokaryote that was isolated from Tobacco.

microaerophile mesophilic

Name and taxonomic classification

SI-ID 303149

CCUG 52960

@ref 20215

Last LPSN update 2025-12-16 10:07:01

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Enterococcaceae

Genus Tetragenococcus

Species Tetragenococcus halophilus

Full scientific name Tetragenococcus halophilus (Mees 1934) Collins et al. 1993

Synonyms (1)

Pediococcus halophilus

BacDive ID	Other strains from **Tetragenococcus halophilus** (26)	Type strain
145984	T. halophilus CCUG 30089
147215	T. halophilus CCUG 33069
153369	T. halophilus CCUG 49357
153961	T. halophilus CCUG 51777
154280	T. halophilus CCUG 52959
154317	T. halophilus CCUG 53046
154634	T. halophilus CCUG 54657
162452	T. halophilus JCM 19268
162453	T. halophilus JCM 19269
162790	T. halophilus JCM 2016, TISTR 346
162795	T. halophilus JCM 2017
162801	T. halophilus JCM 2018
162805	T. halophilus JCM 2019
162809	T. halophilus JCM 2020
162821	T. halophilus JCM 20246, IAM 1674, NISL 7118
162822	T. halophilus JCM 20247, IAM 1675, NISL 7126
162823	T. halophilus JCM 20249, IAM 1678, NISL 7116
162824	T. halophilus JCM 20250, ATCC 13622, IAM 1681
162825	T. halophilus JCM 20251, IAM 1682, NISL 7119
162826	T. halophilus JCM 20254, ATCC 13623, IAM 1685
162827	T. halophilus JCM 20255, IAM 1686, NISL 7120
162828	T. halophilus JCM 20256, ATCC 13624, IAM 1688
162829	T. halophilus JCM 20257, IAM 1689, NISL 7121
162830	T. halophilus JCM 20258, IAM 1692
162832	T. halophilus JCM 20260, IAM 1698, NISL 7123
162833	T. halophilus JCM 20261, IAM 1702, NISL 7125

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
59748	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

59748

Oxygen tolerancemicroaerophile

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68370	29016 ChEBI	arginine	-	hydrolysis	from API 20STR
68381	29016 ChEBI	arginine	-	hydrolysis	from API rID32STR
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68379	17634 ChEBI	D-glucose	+	fermentation	from API Coryne
68379	16899 ChEBI	D-mannitol	-	fermentation	from API Coryne
68370	16899 ChEBI	D-mannitol	-	builds acid from	from API 20STR
68381	16899 ChEBI	D-mannitol	+	builds acid from	from API rID32STR
68379	16988 ChEBI	D-ribose	-	fermentation	from API Coryne
68370	16988 ChEBI	D-ribose	-	builds acid from	from API 20STR
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68370	17924 ChEBI	D-sorbitol	-	builds acid from	from API 20STR
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
68379	65327 ChEBI	D-xylose	-	fermentation	from API Coryne
68379	4853 ChEBI	esculin	+	hydrolysis	from API Coryne
68370	4853 ChEBI	esculin	-	hydrolysis	from API 20STR
68379	5291 ChEBI	gelatin	-	hydrolysis	from API Coryne
68379	28087 ChEBI	glycogen	-	fermentation	from API Coryne
68370	28087 ChEBI	glycogen	-	builds acid from	from API 20STR
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68370	606565 ChEBI	hippurate	-	hydrolysis	from API 20STR
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
68370	15443 ChEBI	inulin	-	builds acid from	from API 20STR
68370	30849 ChEBI	L-arabinose	-	builds acid from	from API 20STR
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68379	17716 ChEBI	lactose	-	fermentation	from API Coryne
68370	17716 ChEBI	lactose	-	builds acid from	from API 20STR
68381	17716 ChEBI	lactose	-	builds acid from	from API rID32STR
68379	17306 ChEBI	maltose	-	fermentation	from API Coryne
68381	17306 ChEBI	maltose	-	builds acid from	from API rID32STR
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68381	320055 ChEBI	methyl beta-D-glucopyranoside	-	builds acid from	from API rID32STR
68379	17632 ChEBI	nitrate	-	reduction	from API Coryne
68381	27941 ChEBI	pullulan	-	builds acid from	from API rID32STR
68370	16634 ChEBI	raffinose	-	builds acid from	from API 20STR
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68370	28017 ChEBI	starch	-	builds acid from	from API 20STR
68379	17992 ChEBI	sucrose	-	fermentation	from API Coryne
68381	17992 ChEBI	sucrose	+	builds acid from	from API rID32STR
68370	27082 ChEBI	trehalose	+	builds acid from	from API 20STR
68381	27082 ChEBI	trehalose	+	builds acid from	from API rID32STR
68379	16199 ChEBI	urea	-	hydrolysis	from API Coryne
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR
68370	15688 ChEBI	acetoin		from API 20STR

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68381	15688 ChEBI	acetoin	-	from API rID32STR
68370	15688 ChEBI	acetoin	-	from API 20STR

Enzymes

@ref	Value	Activity	Ec
68381	Alanyl-Phenylalanyl-Proline arylamidase	-		from API rID32STR
68381	alkaline phosphatase	-	3.1.3.1	from API rID32STR
68379	alkaline phosphatase	-	3.1.3.1	from API Coryne
68370	alkaline phosphatase	-	3.1.3.1	from API 20STR
68381	alpha-galactosidase	-	3.2.1.22	from API rID32STR
68370	alpha-galactosidase	-	3.2.1.22	from API 20STR
68379	alpha-glucosidase	-	3.2.1.20	from API Coryne
68381	arginine dihydrolase	-	3.5.3.6	from API rID32STR
68370	arginine dihydrolase	-	3.5.3.6	from API 20STR
68381	beta-galactosidase	-	3.2.1.23	from API rID32STR
68370	beta-galactosidase	-	3.2.1.23	from API 20STR
68379	beta-galactosidase	-	3.2.1.23	from API Coryne
68381	beta-glucosidase	+	3.2.1.21	from API rID32STR
68370	beta-glucosidase	-	3.2.1.21	from API 20STR
68379	beta-glucosidase	+	3.2.1.21	from API Coryne
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68379	beta-glucuronidase	-	3.2.1.31	from API Coryne
68370	beta-glucuronidase	-	3.2.1.31	from API 20STR
68381	beta-mannosidase	-	3.2.1.25	from API rID32STR
68379	catalase	-	1.11.1.6	from API Coryne
68379	gelatinase	-		from API Coryne
68381	glycyl tryptophan arylamidase	-		from API rID32STR
68370	leucine arylamidase	-	3.4.11.1	from API 20STR
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68379	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API Coryne
68379	pyrazinamidase	-	3.5.1.B15	from API Coryne
68381	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32STR
68379	pyrrolidonyl arylamidase	+	3.4.19.3	from API Coryne
68370	pyrrolidonyl arylamidase	-	3.4.19.3	from API 20STR
68381	urease	-	3.5.1.5	from API rID32STR
68379	urease	-	3.5.1.5	from API Coryne

Fatty acid profile

Metadata FA analysis

@ref

59748

Fatty acid	Percentage	ECL
C16:0	31.8	16
C19:0 CYCLO ω8c	28.5	18.9
C18:1 ω7c /12t/9t	7.2	17.824
C17:0 CYCLO	6	16.888
C14:0	5.7	14
C18:2 ω6,9c/C18:0 ANTE	4.6	17.724
C16:1 ω7c	4.4	15.819
C18:0	3.2	18
C19:0 CYCLO ω9c	2.3	18.87
C15:0 ISO	2.2	14.621
C15:0 ANTEISO	2.2	14.711
C18:1 ω9c	2	17.769

API coryne

@ref	Reduction of nitrateNIT	PYZ	PYRA	PAL	beta GUR	beta GAL	alpha GLU	beta NAG	ESC	URE	GEL	Control fermentationControl	GLU	RIB	XYL	MAN	MAL	LAC	SAC	GLYG	CAT
59748	-	-	+	-	-	-	-	-	+	-	-	-	+	-	-	-	-	-	-	-	-

API 20STR

@ref	Acetoin production (Voges Proskauer test)VP	HIP	ESC	PYRA	alpha GAL	beta GUR	beta GAL	PAL	LAP	ADH	RIB	ARA	MAN	SOR	LAC	TRE	INU	RAF	AMD	GLYG	beta hemolysis presentbeta HEM
59748	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
59748	-	+	-	-	-	-	-	+	-	-	+	-	+	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	#Engineered product
#Host	#Plants	#Herbaceous plants (Grass,Crops)

Isolation

@ref	Sample type	Sampling date	Country	Country ISO 3 Code	Continent
59748	Tobacco	2006	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#59748	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 52960
#68370	Automatically annotated from API 20STR .
#68379	Automatically annotated from API Coryne .
#68381	Automatically annotated from API rID32STR .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Tetragenococcus halophilus (CCUG 52960)

Name and taxonomic classification

Morphology