Tetragenococcus halophilus (TISTR 346, JCM 2016)

Name: Tetragenococcus halophilus (TISTR 346, JCM 2016)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162790

Type strain

Culture col. no. TISTR 346 JCM 2016

NCBI tax ID(s) 51669

Special Collections JCM

Links

Tetragenococcus halophilus JCM 2016 is a mesophilic prokaryote that was isolated from Nam-budu .

mesophilic 16S sequence

Name and taxonomic classification

SI-ID 63569

JCM 2016,TISTR 346

@ref 20215

Last LPSN update 2025-12-16 10:09:04

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Enterococcaceae

Genus Tetragenococcus

Species Tetragenococcus halophilus

Full scientific name Tetragenococcus halophilus (Mees 1934) Collins et al. 1993

Synonyms (1)

Pediococcus halophilus

BacDive ID	Other strains from **Tetragenococcus halophilus** (26)	Type strain
145984	T. halophilus CCUG 30089
147215	T. halophilus CCUG 33069
153369	T. halophilus CCUG 49357
153961	T. halophilus CCUG 51777
154280	T. halophilus CCUG 52959
154281	T. halophilus CCUG 52960
154317	T. halophilus CCUG 53046
154634	T. halophilus CCUG 54657
162452	T. halophilus JCM 19268
162453	T. halophilus JCM 19269
162795	T. halophilus JCM 2017
162801	T. halophilus JCM 2018
162805	T. halophilus JCM 2019
162809	T. halophilus JCM 2020
162821	T. halophilus JCM 20246, IAM 1674, NISL 7118
162822	T. halophilus JCM 20247, IAM 1675, NISL 7126
162823	T. halophilus JCM 20249, IAM 1678, NISL 7116
162824	T. halophilus JCM 20250, ATCC 13622, IAM 1681
162825	T. halophilus JCM 20251, IAM 1682, NISL 7119
162826	T. halophilus JCM 20254, ATCC 13623, IAM 1685
162827	T. halophilus JCM 20255, IAM 1686, NISL 7120
162828	T. halophilus JCM 20256, ATCC 13624, IAM 1688
162829	T. halophilus JCM 20257, IAM 1689, NISL 7121
162830	T. halophilus JCM 20258, IAM 1692
162832	T. halophilus JCM 20260, IAM 1698, NISL 7123
162833	T. halophilus JCM 20261, IAM 1702, NISL 7125

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	30	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Isolation

67770

Sample typeNam-budu (fermented fish in liquid form)

Taxonmaps

69479

Global distribution of 16S sequence LC269260 (>99% sequence identity) for Tetragenococcus halophilus from Microbeatlas

Aquatic Samples	1678
Soil Samples	861
Animal Samples	20165
Plant Samples	532
Total Samples	23236

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Tetragenococcus halophilus gene for 16S rRNA, partial sequence, strain: JCM 2016	AB911539	1501		51669
67770	Tetragenococcus halophilus gene for 16S ribosomal RNA, partial sequence, strain: JCM 2016	LC269260	1501		51669

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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