Tetragenococcus halophilus (CCUG 30089)

Name: Tetragenococcus halophilus (CCUG 30089)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 145984

Type strain

Culture col. no. CCUG 30089

NCBI tax ID(s) 51669

Special Collections CCUG

Links

Tetragenococcus halophilus CCUG 30089 is a microaerophile, mesophilic prokaryote that was isolated from Industrial tobacco fermentation process.

microaerophile mesophilic

Name and taxonomic classification

SI-ID 58132

CCUG 30089

@ref 20215

Last LPSN update 2025-12-16 10:04:59

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Enterococcaceae

Genus Tetragenococcus

Species Tetragenococcus halophilus

Full scientific name Tetragenococcus halophilus (Mees 1934) Collins et al. 1993

Synonyms (1)

Pediococcus halophilus

BacDive ID	Other strains from **Tetragenococcus halophilus** (26)	Type strain
147215	T. halophilus CCUG 33069
153369	T. halophilus CCUG 49357
153961	T. halophilus CCUG 51777
154280	T. halophilus CCUG 52959
154281	T. halophilus CCUG 52960
154317	T. halophilus CCUG 53046
154634	T. halophilus CCUG 54657
162452	T. halophilus JCM 19268
162453	T. halophilus JCM 19269
162790	T. halophilus JCM 2016, TISTR 346
162795	T. halophilus JCM 2017
162801	T. halophilus JCM 2018
162805	T. halophilus JCM 2019
162809	T. halophilus JCM 2020
162821	T. halophilus JCM 20246, IAM 1674, NISL 7118
162822	T. halophilus JCM 20247, IAM 1675, NISL 7126
162823	T. halophilus JCM 20249, IAM 1678, NISL 7116
162824	T. halophilus JCM 20250, ATCC 13622, IAM 1681
162825	T. halophilus JCM 20251, IAM 1682, NISL 7119
162826	T. halophilus JCM 20254, ATCC 13623, IAM 1685
162827	T. halophilus JCM 20255, IAM 1686, NISL 7120
162828	T. halophilus JCM 20256, ATCC 13624, IAM 1688
162829	T. halophilus JCM 20257, IAM 1689, NISL 7121
162830	T. halophilus JCM 20258, IAM 1692
162832	T. halophilus JCM 20260, IAM 1698, NISL 7123
162833	T. halophilus JCM 20261, IAM 1702, NISL 7125

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
49893	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

49893

Oxygen tolerancemicroaerophile

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68371	27613 ChEBI	amygdalin	-	builds acid from	from API 50CH acid
68375	22599 ChEBI	arabinose	-	fermentation	from API ID32STA
68371	18305 ChEBI	arbutin	-	builds acid from	from API 50CH acid
68381	29016 ChEBI	arginine	-	hydrolysis	from API rID32STR
68375	29016 ChEBI	arginine	-	hydrolysis	from API ID32STA
68371	17057 ChEBI	cellobiose	-	builds acid from	from API 50CH acid
68375	17057 ChEBI	cellobiose	-	fermentation	from API ID32STA
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68371	15824 ChEBI	D-fructose	-	builds acid from	from API 50CH acid
68375	15824 ChEBI	D-fructose	-	fermentation	from API ID32STA
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	12936 ChEBI	D-galactose	-	builds acid from	from API 50CH acid
68375	17634 ChEBI	D-glucose	+	fermentation	from API ID32STA
68371	17634 ChEBI	D-glucose	-	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68375	16899 ChEBI	D-mannitol	-	fermentation	from API ID32STA
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68381	16899 ChEBI	D-mannitol	-	builds acid from	from API rID32STR
68371	16024 ChEBI	D-mannose	-	builds acid from	from API 50CH acid
68375	16024 ChEBI	D-mannose	-	fermentation	from API ID32STA
68381	16988 ChEBI	D-ribose	-	builds acid from	from API rID32STR
68375	16988 ChEBI	D-ribose	-	fermentation	from API ID32STA
68371	16988 ChEBI	D-ribose	-	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68381	16443 ChEBI	D-tagatose	-	builds acid from	from API rID32STR
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68375	4853 ChEBI	esculin	-	hydrolysis	from API ID32STA
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	-	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	-	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	-	builds acid from	from API 50CH acid
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68371	28087 ChEBI	glycogen	-	builds acid from	from API 50CH acid
68381	606565 ChEBI	hippurate	-	hydrolysis	from API rID32STR
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	18287 ChEBI	L-fucose	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68381	17716 ChEBI	lactose	-	builds acid from	from API rID32STR
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68375	17716 ChEBI	lactose	-	fermentation	from API ID32STA
68381	17306 ChEBI	maltose	-	builds acid from	from API rID32STR
68371	17306 ChEBI	maltose	-	builds acid from	from API 50CH acid
68375	17306 ChEBI	maltose	-	fermentation	from API ID32STA
68381	6731 ChEBI	melezitose	-	builds acid from	from API rID32STR
68371	6731 ChEBI	melezitose	-	builds acid from	from API 50CH acid
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68371	28053 ChEBI	melibiose	-	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	-	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68381	320055 ChEBI	methyl beta-D-glucopyranoside	-	builds acid from	from API rID32STR
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	17268 ChEBI	myo-inositol	-	builds acid from	from API 50CH acid
68375	59640 ChEBI	N-acetylglucosamine	-	fermentation	from API ID32STA
68371	59640 ChEBI	N-acetylglucosamine	-	builds acid from	from API 50CH acid
68375	17632 ChEBI	nitrate	-	reduction	from API ID32STA
68375	18257 ChEBI	ornithine	-	degradation	from API ID32STA
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68381	27941 ChEBI	pullulan	-	builds acid from	from API rID32STR
68375	16634 ChEBI	raffinose	-	fermentation	from API ID32STA
68371	16634 ChEBI	raffinose	-	builds acid from	from API 50CH acid
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	-	builds acid from	from API 50CH acid
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68371	28017 ChEBI	starch	-	builds acid from	from API 50CH acid
68381	17992 ChEBI	sucrose	-	builds acid from	from API rID32STR
68371	17992 ChEBI	sucrose	-	builds acid from	from API 50CH acid
68375	17992 ChEBI	sucrose	-	fermentation	from API ID32STA
68381	27082 ChEBI	trehalose	+	builds acid from	from API rID32STR
68375	27082 ChEBI	trehalose	-	fermentation	from API ID32STA
68371	27082 ChEBI	trehalose	-	builds acid from	from API 50CH acid
68375	32528 ChEBI	turanose	-	fermentation	from API ID32STA
68371	32528 ChEBI	turanose	-	builds acid from	from API 50CH acid
68375	16199 ChEBI	urea	-	hydrolysis	from API ID32STA
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Antibiotic resistance

@ref	ChEBI	Metabolite	Is antibiotic	Is sensitive	Sensitivity conc.
68375	28368	novobiocin			1.8 µg	from API ID32STA

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR
68375	15688 ChEBI	acetoin		from API ID32STA

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68381	15688 ChEBI	acetoin	-	from API rID32STR
68375	15688 ChEBI	acetoin	-	from API ID32STA

Enzymes

@ref	Value	Activity
68381	Alanyl-Phenylalanyl-Proline arylamidase	-	from API rID32STR
68381	alkaline phosphatase	-	from API rID32STR
68375	alkaline phosphatase	-	from API ID32STA
68381	alpha-galactosidase	-	from API rID32STR
68381	arginine dihydrolase	-	from API rID32STR
68375	arginine dihydrolase	-	from API ID32STA
68381	beta-galactosidase	-	from API rID32STR
68375	beta-galactosidase	-	from API ID32STA
68381	beta-glucosidase	-	from API rID32STR
68375	beta-glucosidase	-	from API ID32STA
68381	beta-glucuronidase	-	from API rID32STR
68375	beta-glucuronidase	-	from API ID32STA
68381	beta-mannosidase	-	from API rID32STR
68381	glycyl tryptophan arylamidase	-	from API rID32STR
68375	L-arginine arylamidase	-	from API ID32STA
68381	N-acetyl-beta-glucosaminidase	-	from API rID32STR
68375	ornithine decarboxylase	-	from API ID32STA
68381	pyrrolidonyl arylamidase	+	from API rID32STR
68375	pyrrolidonyl arylamidase	-	from API ID32STA
68381	urease	-	from API rID32STR
68375	urease	-	from API ID32STA

Fatty acid profile

Metadata FA analysis

@ref

49893

Fatty acid	Percentage	ECL
C16:0	32	16
C19:0 CYCLO ω8c	31	18.9
C14:0	10.2	14
C17:0 CYCLO	7.9	16.888
C18:1 ω7c /12t/9t	6.5	17.824
C16:1 ω7c	6.4	15.819
C18:2 ω6,9c/C18:0 ANTE	3.8	17.724
C18:0	2.3	18

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
49893	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API ID32STA

@ref	URE	ADH (Arg)	ODC	ESC	GLU	FRU	MNE	MAL	LAC	TRE	MAN	RAF	RIB	CEL	Reduction of nitrateNIT	Acetoin production (Voges Proskauer test)VP	beta GAL	L-arginine arylamidaseArgA	PAL	Pyrrolidonyl arylamidasePyrA	NOVO	SAC	NAG	TUR	ARA	beta GUR
49893	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
49893	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Industrial	#Industrial production

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
49893	Industrial tobacco fermentation process	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#49893	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30089
#68371	Automatically annotated from API 50CH acid .
#68375	Automatically annotated from API ID32STA .
#68381	Automatically annotated from API rID32STR .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Tetragenococcus halophilus (CCUG 30089)

Name and taxonomic classification

Morphology