Name: Arthrobacter sp. JCM 19049
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 162382

Type strain:

Species: Arthrobacter sp.

Culture col. no.: JCM 19049

Strain history: T. Kudo H656.

NCBI tax ID(s): 1460643 (species)

Special Collections

Other strains from Arthrobacter sp.

Section

Arthrobacter sp. JCM 19049 is a Gram-positive bacterium that was isolated from Yellowfin toxic goby .

Gram-positive
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Micrococcaceae*
	Genus	*Arthrobacter*
	Full Scientific Name (LPSN)	Arthrobacter Conn and Dimmick 1947 (Approved Lists 1980)

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %92.612

[Ref.: #69480]	Motility	no Confidence in %95

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]

Ability of spore formation

no Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Yellowfin toxic goby (Yongeichthys criniger)
[Ref.: #67770]	Host species	Yongeichthys criniger
[Ref.: #67770]	Geographic location (country and/or sea, region)	coast of Iriomote Island
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Arthrobacter sp. JCM 19049	GCA_001310435	contig	GenBank ENA	1460643 tax ID
[Ref.: #66792]	Arthrobacter sp. JCM 19049	1460643.3	wgs	PATRIC	1460643 tax ID	*
[Ref.: #66792]	Arthrobacter sp. JCM 19049	2728369644	draft	JGI IMG/M	1460643 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Arthrobacter sp. JCM 19049 PATRIC: 1460643.3
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Arthrobacter sp. JCM 19049 PATRIC: 1460643.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	92.612	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.561	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	82.848	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	87.312	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96.091	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	95	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19049

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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