Cite this strain

"Arthrobacter nitrophenolicus" (DSM 23165, MTCC 10104, SJCon)

BacDive ID 24191

Type strain

Strain Designation SJCon

Culture col. no. DSM 23165 MTCC 10104 SJCon JCM 16850

NCBI tax ID(s) 1667 683150

Special Collections DSMZ JCM

History DSMZ <- R. K. Jain, MTCC; SJCon JCM <-- R. K. Jain strain SJCon.

"Arthrobacter nitrophenolicus" SJCon is a bacterium that was isolated from soil from pesticide-contaminated site.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

Culture Collection Numbers

DSM 23165 MTCC 10104 SJCon JCM 16850

@ref 20215

Last LPSN update 2026-05-29 08:30:34

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micrococcales

Family Micrococcaceae

Genus Arthrobacter

Species "Arthrobacter nitrophenolicus"

Full scientific name Arthrobacter nitrophenolicus Arora and Jain 2013

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	90.104

Spore formation

@ref	Spore formation	Confidence
125439		91.513

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Engineered	#Contamination	-
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
20316	soil from pesticide-contaminated site	Punjab, Mohali	India	IND	Asia
67770	Pesticide-contaminated site	Punjab	India	IND	Asia

Taxonmaps

69479

Global distribution of 16S sequence GQ927310 (>99% sequence identity) for Micrococcaceae from Microbeatlas

Aquatic Samples	61
Soil Samples	385
Animal Samples	94
Plant Samples	273
Total Samples	813

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
124043	ASM4054618v1 assembly for Arthrobacter nitrophenolicus SJCon	contig	GCA_040546185		2929916992	683150	68.21
67770	Whole genome assembly for Arthrobacter nitrophenolicus SJCon	contig	GCA_000332815	683150.5	2531839309	683150	31.14

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
20316	Arthrobacter nitrophenolicus strain SJCon 16S ribosomal RNA gene, partial sequence	GQ927310	1446		683150

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM4054618v1 assembly for Arthrobacter nitrophenolicus SJCon
NCBI: GCA_040546185

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	gram_stain	BacteriaNetⓘ	positive	75.56	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	90.10	no
125439	motility	BacteriaNetⓘ	no	72.50	no
125439	spore_formation	BacteriaNetⓘ	no	91.51	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Draft Genome Sequence of the 2-Chloro-4-Nitrophenol-Degrading Bacterium Arthrobacter sp. Strain SJCon.	Vikram S, Kumar S, Vaidya B, Pinnaka AK, Raghava GP	Genome Announc	10.1128/genomeA.00058-13	2013
Metabolism	Pathway for degradation of 2-chloro-4-nitrophenol in Arthrobacter sp. SJCon.	Arora PK, Jain RK	Curr Microbiol	10.1007/s00284-011-0022-2	2011
Phylogeny	Arthrobacter nitrophenolicus sp. nov. a new 2-chloro-4-nitrophenol degrading bacterium isolated from contaminated soil.	Arora PK, Jain RK	3 Biotech	10.1007/s13205-012-0066-4	2012

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20316	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 23165
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .

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"Arthrobacter nitrophenolicus" (DSM 23165, MTCC 10104, SJCon)

Name and taxonomic classification

Culture Collection Numbers

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_040546185

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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