Name: Halomonas sp. YCSA31-1
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158123

Type strain:

Species: Halomonas sp.

Strain Designation: YCSA31-1

Culture col. no.: DSM 24477

Strain history: <- Q. Lingyun, First Institute of Oceanography, SOA, Quingdao, China; YCSA31-1

NCBI tax ID(s): 1486246 (species)

SI-ID 398632

DSM 24477

Other strains from Halomonas sp.

H. sp. Duncon, DSM 6507
H. sp. C2M2, DSM 6798, ATCC 23597, JCM ...
H. sp. 9/1, DSM 6004
H. sp. 15/8, DSM 6005
H. sp. 21/6, DSM 6006
H. sp. 21/7, DSM 6007
H. sp. MA-C, DSM 7328
H. sp. GWS-BW-H8hM, DSM 17996
H. sp. R 63, DSM 15399, KMM 3656
H. sp. CGMCC, DSM 17864, YIM DKMY60
H. sp. EL-203, DSM 12517
H. sp. EL-29, DSM 12518
H. sp. EL-31, DSM 12545
H. sp. EL-146, DSM 12547
H. sp. H1, DSM 9564
H. sp. NS-TN, DSM 13379
H. sp. 5A22, DSM 24106
H. sp. 4AB3, DSM 24107
H. sp. 2B2, DSM 24108
H. sp. 1E1, DSM 24186
H. sp. GFAJ-1, DSM 24684
H. sp. BL-171, DSM 21905, ATCC BAA-1713
H. sp. DSM 19218, YIM 91102
H. sp. DSM 19220, YIM 90599
H. sp. LMC2-5, DSM 22155
H. sp. H1, DSM 26132
H. sp. GOS-1, DSM 26667
H. sp. CCUG 24023
H. sp. CCUG 30821
H. sp. CCUG 30822
H. sp. CCUG 38840
H. sp. CCUG 42321 A
H. sp. G5-11, DSM 25419
H. sp. BH047, DSM 25440
H. sp. P2426, DSM 103116, Marseille-P2426
H. sp. JCM 11460
H. sp. JCM 19031
H. sp. JCM 19032
H. sp. JCM 20637, IAM 12558, LMG 3456, ...

Section

Halomonas sp. YCSA31-1 is a mesophilic bacterium that was isolated from sediment.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Oceanospirillales*
	Family	*Halomonadaceae*
	Genus	*Halomonas*
	Full Scientific Name (LPSN)	Halomonas Vreeland et al. 1980

	Synonym	"Litchfieldella"
	Synonym	"Franzmannia"
	Synonym	"Billgrantia"
	Synonym	"Onishia"
	Synonym	"Vreelandella"
	Synonym	"Bisbaumannia"
	Synonym	Volcaniella
	Synonym	Deleya

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64702]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #64702]

Culture medium growth

[Ref.: #64702]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64702]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #64702]			growth	25 °C

[Ref.: #64702]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #64702]	Sample type/isolated from	sediment
[Ref.: #64702]	Geographic location (country and/or sea, region)	Yellow Sea
[Ref.: #64702]	Country	China
[Ref.: #64702]	Country ISO 3 Code	CHN
[Ref.: #64702]	Continent	Asia
[Ref.: #64702]	Geographic location	36.5000°/120.8000°
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Sediment
#Environmental	#Terrestrial	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HQ536998 (>99% sequence identity) for Halomonas from Microbeatlas

Aquatic Samples	94
Soil Samples
Animal Samples	5
Plant Samples	1
Total Samples	100

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #64702]	Halomonas sp. YCSA31-1 16S ribosomal RNA gene, partial sequence	HQ536998	1408	ENA	1030271 tax ID

Availability in culture collections External links

[Ref.: #64702]

Culture collection no.

DSM 24477

[Ref.: #110960]

SI-ID 398632

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#64702

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 24477

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#110960

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398632.1 )

* These data were automatically processed and therefore are not curated

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