Name: Halomonas urmiana Tabriz3
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 158122

Type strain:

Species: Halomonas urmiana

Strain Designation: Tabriz3, TBZ3

Culture col. no.: DSM 22871

Strain history: <- M. S. Hejazi, Faculty Pharmacy, Tabriz Univ. Medical Sci., Iran; Tabriz3 <- S. Zununi Vahed

NCBI tax ID(s): 490901 (species)

SI-ID 398268

DSM 22871

Section

Halomonas urmiana Tabriz3 is a mesophilic bacterium of the family Halomonadaceae.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Oceanospirillales*
	Family	*Halomonadaceae*
	Genus	*Halomonas*
	Species	**Halomonas urmiana**
	Full Scientific Name (LPSN)	Halomonas urmiana Khan et al. 2020

Information on culture and growth conditions Culture and growth conditions

[Ref.: #64701]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #64701]

Culture medium growth

[Ref.: #64701]

Culture medium link

Medium recipe at MediaDive

[Ref.: #64701]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #64701]			growth	28 °C

[Ref.: #64701]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #64701]	Geographic location (country and/or sea, region)	West Azarbaijan, Lake Urmia nearby Tabriz
[Ref.: #64701]	Country	Iran
[Ref.: #64701]	Country ISO 3 Code	IRN
[Ref.: #64701]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence EU305729 (>99% sequence identity) for Halomonas urmiana from Microbeatlas

Aquatic Samples	23
Soil Samples	2
Animal Samples	3
Plant Samples
Total Samples	28

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #64701]	Halomonas sp. TBZ3 16S ribosomal RNA gene, partial sequence	EU305729	1485	ENA	490901 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Halomonas urmiana TBZ3	GCA_005780185	contig	GenBank	490901 tax ID	*
[Ref.: #66792]	Halomonas urmiana TBZ3	2902747981	draft	JGI IMG/M	490901 tax ID	*

Availability in culture collections External links

[Ref.: #64701]

Culture collection no.

DSM 22871

[Ref.: #110959]

SI-ID 398268

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Halomonas urmiana sp. nov., a moderately halophilic bacterium isolated from Urmia Lake in Iran.	Khan SA, Zununi Vahed S, Forouhandeh H, Tarhriz V, Chaparzadeh N, Hejazi MA, Jeon CO, Hejazi MS	Int J Syst Evol Microbiol	10.1099/ijsem.0.004005	2020	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#64701

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 22871

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#110959

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398268.1 )

* These data were automatically processed and therefore are not curated

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