Name: Pseudomonas bathycetes C2M2
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 6053

Type strain:

Species: Pseudomonas bathycetes

Strain Designation: C2M2

Culture col. no.: DSM 6798, ATCC 23597, JCM 6308, LMG 2145, NCIB 1550, CGMCC 1.1808, IAM 13162, NCIMB 1550

Strain history: ATCC 23597 <-- R. R. Colwell C2M2 <-- C. ZoBell and R. Morita.

NCBI tax ID(s): 1486246 (species)

SI-ID 2172

LMG 2145, ATCC 23597, DSM 6798, JCM 6308, NCMB 1550, NCIB 1550, NCIMB 1550, IAM13162, AS 1.1808, CGMCC 1.1808

Special Collections

DSMZ
JCM

Other strains from Pseudomonas bathycetes

Section

Pseudomonas bathycetes C2M2 is a bacterium that was isolated from sediment.

16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Pseudomonadales*
	Family	*Pseudomonadaceae*
	Genus	*Pseudomonas*
	Species	"Pseudomonas bathycetes"
	Full Scientific Name (LPSN)	Pseudomonas bathycetes Quigley and Colwell 1968

Information on culture and growth conditions Culture and growth conditions

[Ref.: #2826]

Culture medium

SEA WATER AGAR (DSMZ Medium 246)

[Ref.: #2826]

Culture medium growth

[Ref.: #2826]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2826]

Culture medium composition

expand / minimize

[Ref.: #2826]

Culture medium

BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)

[Ref.: #2826]

Culture medium growth

[Ref.: #2826]

Culture medium link

Medium recipe at MediaDive

[Ref.: #2826]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #2826]			growth	20 °C
[Ref.: #67770]			growth	25 °C

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #2826]	Sample type/isolated from	sediment
[Ref.: #2826]	Geographic location (country and/or sea, region)	Pacific Ocean, Challenger deep (10373 Metres) in Marianas Trench

[Ref.: #67770]	Sample type/isolated from	Deep sea sediments of the Pacific Ocean
* marker position based on {}

Isolation sources categories

#Environmental	#Aquatic	#Sediment
#Environmental	#Terrestrial	#Sediment

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence MG971241 (>99% sequence identity) for Halomonas from Microbeatlas

Aquatic Samples	5177
Soil Samples	435
Animal Samples	4415
Plant Samples	138
Total Samples	10165

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #2826]	Halomonas sp. strain DSM _6798_Clone1 16S ribosomal RNA gene, partial sequence	MG971232	1522	GenBank ENA	1486246 tax ID
[Ref.: #2826]	Halomonas sp. strain DSM _6798_Clone2 16S ribosomal RNA gene, partial sequence	MG971233	1522	GenBank ENA	1486246 tax ID
[Ref.: #2826]	Halomonas sp. strain DSM _6798_Clone3 16S ribosomal RNA gene, partial sequence	MG971234	1518	GenBank ENA	1486246 tax ID
[Ref.: #2826]	Halomonas sp. strain DSM _6798_Clone4 16S ribosomal RNA gene, partial sequence	MG971235	1523	GenBank ENA	1486246 tax ID
[Ref.: #2826]	Halomonas sp. strain DSM _6798_Clone5 16S ribosomal RNA gene, partial sequence	MG971236	1524	GenBank ENA	1486246 tax ID
[Ref.: #2826]	Halomonas sp. strain DSM _6798_Clone6 16S ribosomal RNA gene, partial sequence	MG971237	1524	GenBank ENA	1486246 tax ID
[Ref.: #2826]	Halomonas sp. strain DSM _6798_Clone7 16S ribosomal RNA gene, partial sequence	MG971238	1523	GenBank ENA	1486246 tax ID
[Ref.: #2826]	Halomonas sp. strain DSM _6798_Clone8 16S ribosomal RNA gene, partial sequence	MG971239	1524	GenBank ENA	1486246 tax ID
[Ref.: #2826]	Halomonas sp. strain DSM _6798_Clone9 16S ribosomal RNA gene, partial sequence	MG971240	1523	GenBank ENA	1486246 tax ID
[Ref.: #2826]	Halomonas sp. strain DSM _6798_Clone10 16S ribosomal RNA gene, partial sequence	MG971241	1524	GenBank ENA	1486246 tax ID

Availability in culture collections External links

[Ref.: #2826]

Culture collection no.

DSM 6798, ATCC 23597, JCM 6308, LMG 2145, NCIB 1550, CGMCC 1.1808, IAM 13162, NCIMB 1550

[Ref.: #75540]

SI-ID 2172

References

#2826

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 6798

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#75540

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID2172.1 )

* These data were automatically processed and therefore are not curated

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