Name: Streptomyces prasinopilosus DSM 40098
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 15480

Type strain:

Species: Streptomyces prasinopilosus

Culture col. no.: DSM 40098, ATCC 19799, CBS 551.68, IFO 12809, ISP 5098, JCM 4207, JCM 4404, NBRC 12809, NRRL B-2711, RIA 1078, ETH 13675, BCRC 13678, CGMCC 4.1311, CGMCC 4.1525, ICMP 134, LMG 19345, NCIMB 9842, VKM Ac-1740

Strain history: KCC S-0207 <-- J. Nüesch <-- ETH 13765.

NCBI tax ID(s): 67344 (species)

SI-ID 13353

LMG 19345, ATCC 19799, CCRC 13678, DSM 40098, IFO 12809, JCM 4207, JCM 4404, NRRL B-2711, VKM Ac-1740, NCIMB 9842, CBS 551.68, AS 4.1525, NBRC 12809, BCRC 13678, ICMP 134, NCIB 9842, CGMCC 4.1525, CGMCC 4.1311

Special Collections

DSMZ
JCM

Other strains from Streptomyces prasinopilosus

Section

Streptomyces prasinopilosus DSM 40098 is a spore-forming bacterium that was isolated from soil.

spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces prasinopilosus**
	Full Scientific Name (LPSN)	Streptomyces prasinopilosus Ettlinger et al. 1958 (Approved Lists 1980)

Synonym

Streptomyces emeiensis

Information on morphological and physiological properties Morphology

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)

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Culture medium growth

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Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #9310]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

yes Confidence in %90.15

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9310]	Sample type/isolated from	soil
[Ref.: #9310]	Geographic location (country and/or sea, region)	Mallorca
[Ref.: #9310]	Country	Spain
[Ref.: #9310]	Country ISO 3 Code	ESP
[Ref.: #9310]	Continent	Europe

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Port Cristo, Mallorca
[Ref.: #67770]	Country	Spain
[Ref.: #67770]	Country ISO 3 Code	ESP
[Ref.: #67770]	Continent	Europe
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

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Global distribution of 16S sequence EF626597 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	3
Soil Samples	94
Animal Samples	8
Plant Samples	40
Total Samples	145

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #9310]	Streptomyces prasinopilosus gene for 16S rRNA, partial sequence, strain: NBRC 12809	AB249968	1416	GenBank ENA	67344 tax ID
[Ref.: #20218]	Streptomyces prasinopilosus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4404	D44119	119	GenBank ENA	67344 tax ID	*
[Ref.: #20218]	Streptomyces prasinopilosus strain NRRL B-2711 16S ribosomal RNA gene, partial sequence	EF626597	1516	GenBank ENA	67344 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces prasinopilosus NRRL B-2711	GCA_001419695	scaffold	GenBank ENA	67344 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces prasinopilosus NRRL B-2711 NCBI: GCA_001419695.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	89.605	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	95.88	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	86.534	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	90.15	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	92.5	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	87	no

Availability in culture collections External links

[Ref.: #9310]

Culture collection no.

DSM 40098, ATCC 19799, CBS 551.68, IFO 12809, ISP 5098, JCM 4207, JCM 4404, NBRC 12809, NRRL B-2711, RIA 1078, ETH 13675, BCRC 13678, CGMCC 4.1311, CGMCC 4.1525, ICMP 134, LMG 19345, NCIMB 9842, VKM Ac-1740

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SI-ID 13353

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces emeiensis sp. nov., a novel streptomycete from soil in China.	Sun W, Huang Y, Zhang YQ, Liu ZH	Int J Syst Evol Microbiol	10.1099/ijs.0.64934-0	2007	*

References

#9310

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40098

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#84567

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID13353.1 )

* These data were automatically processed and therefore are not curated

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Streptomyces prasinopilosus NRRL B-2711

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