Streptomyces prasinopilosus (DSM 40098, ATCC 19799, CBS 551.68)

Name: Streptomyces prasinopilosus (DSM 40098, ATCC 19799, CBS 551.68)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 15480

Type strain

Culture col. no. DSM 40098 ATCC 19799 CBS 551.68 IFO 12809 ISP 5098 13 more

NCBI tax ID(s) 67344

Special Collections DSMZ JCM

History DSMZ <- E.B. Shirling, ISP <- R. Hütter, ETH, 13675 JCM <-- KCC S-0207 <-- J. Nüesch <-- ETH 13765.

Links

Streptomyces prasinopilosus DSM 40098 is a bacterium that was isolated from soil.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 13353

LMG 19345,ATCC 19799,CCRC 13678,DSM 40098,IFO 12809,JCM 4207,JCM 4404,NRRL B-2711,VKM Ac-1740,NCIMB 9842,CBS 551.68,AS 4.1525,NBRC 12809,BCRC 13678,ICMP 134,NCIB 9842,CGMCC 4.1525,CGMCC 4.1311

@ref 20215

Last LPSN update 2026-05-29 08:28:33

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces prasinopilosus

Full scientific name Streptomyces prasinopilosus Ettlinger et al. 1958 (Approved Lists 1980)

Synonyms (1)

Streptomyces emeiensis

BacDive ID	Other strains from **Streptomyces prasinopilosus** (2)	Type strain
15481	S. prasinopilosus A 12, E-193, DSM 40884, ATCC 19092
16419	S. prasinopilosus 4776, DSM 41884, CGMCC 4.3504, NRRL B-24621, ...

Morphology

Multimedia

@ref:	9310
multimedia content:	DSM_40098.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_40098.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
9310	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water
9310	STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252)		Medium recipe at MediaDive	Name: STARCH - MINERAL SALT - AGAR (STMS) (DSMZ Medium 252) Composition: Agar 20.0 g/l Starch 10.0 g/l (NH4)2SO4 2.0 g/l CaCO3 2.0 g/l K2HPO4 1.0 g/l MgSO4 x 7 H2O 1.0 g/l NaCl 1.0 g/l FeSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l ZnSO4 x 7 H2O 0.001 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
9310	positive	growth	28
67770	positive	growth	28

Physiology and metabolism

Spore formation

@ref	Spore formation	Confidence
125438		90.15

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
9310	soil	Mallorca	Spain	ESP	Europe
67770	Soil	Port Cristo, Mallorca	Spain	ESP	Europe

Taxonmaps

69479

Global distribution of 16S sequence EF626597 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	3
Soil Samples	94
Animal Samples	8
Plant Samples	40
Total Samples	145

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
9310	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	IMG accession	NCBI tax ID	Score
67770	ASM141969v1 assembly for Streptomyces prasinopilosus NRRL B-2711	scaffold	GCA_001419695	2690316023	67344	0

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces prasinopilosus gene for 16S ribosomal RNA, partial sequence, strain: JCM 4404	D44119	119	67344
20218	Streptomyces prasinopilosus strain NRRL B-2711 16S ribosomal RNA gene, partial sequence	EF626597	1516	67344
9310	Streptomyces prasinopilosus gene for 16S rRNA, partial sequence, strain: NBRC 12809	AB249968	1416	67344

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces prasinopilosus NRRL B-2711
NCBI: GCA_001419695.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.61	no
125438	anaerobic	anaerobicⓘ	no	95.88	no
125438	aerobic	aerobicⓘ	yes	86.53	no
125438	spore-forming	spore-formingⓘ	yes	90.15	no
125438	thermophilic	thermophileⓘ	no	92.50	no
125438	flagellated	motile2+ⓘ	no	87.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Biological Characteristics and Antimicrobial Activity of Endophytic Streptomyces sp. TQR12-4 Isolated from Elite Citrus nobilis Cultivar Ham Yen of Vietnam.	Hong-Thao PT, Mai-Linh NV, Hong-Lien NT, Van Hieu N.	Int J Microbiol	10.1155/2016/7207818	2016
Phylogeny	Taxonomic evaluation of species in the Streptomyces hirsutus clade using multi-locus sequence analysis and proposals to reclassify several species in this clade.	Labeda DP, Rong X, Huang Y, Doroghazi JR, Ju KS, Metcalf WW.	Int J Syst Evol Microbiol	10.1099/ijsem.0.001017	2016
Enzymology	Exploration of inhibitory action of Azo imidazole derivatives against COVID-19 main protease (M^pro): A computational study.	Chhetri A, Chettri S, Rai P, Sinha B, Brahman D.	J Mol Struct	10.1016/j.molstruc.2020.129178	2021
Phylogeny	Phylogenetic relationships in the family Streptomycetaceae using multi-locus sequence analysis.	Labeda DP, Dunlap CA, Rong X, Huang Y, Doroghazi JR, Ju KS, Metcalf WW.	Antonie Van Leeuwenhoek	10.1007/s10482-016-0824-0	2017
Phylogeny	Novel antifungal antibiotics maniwamycins A and B. I. Taxonomy of the producing organism, fermentation, isolation, physico-chemical properties and biological properties.	Nakayama M, Takahashi Y, Itoh H, Kamiya K, Shiratsuchi M, Otani G.	J Antibiot (Tokyo)	10.7164/antibiotics.42.1535	1989
Phylogeny	Streptomyces emeiensis sp. nov., a novel streptomycete from soil in China.	Sun W, Huang Y, Zhang YQ, Liu ZH	Int J Syst Evol Microbiol	10.1099/ijs.0.64934-0	2007

References

#9310	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40098
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces prasinopilosus (DSM 40098, ATCC 19799, CBS 551.68)

Name and taxonomic classification

Morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Spore formation

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001419695

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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