Streptomyces prasinopilosus (DSM 41884, CGMCC 4.3504, NRRL B-24621)

Name: Streptomyces prasinopilosus (DSM 41884, CGMCC 4.3504, NRRL B-24621)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 16419

Type strain

Strain Designation 4776

Culture col. no. DSM 41884 CGMCC 4.3504 NRRL B-24621 4776 JCM 15479

NCBI tax ID(s) 67344

Special Collections DSMZ JCM Literature strains

History DSMZ <- W. Sun; CGMCC 4.3504 <- T.-J. Yao JCM <-- CGMCC 4.3504 <-- W. Sun et al. 4776.

Links

Streptomyces prasinopilosus 4776 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from soil sample.

spore-forming Gram-positive aerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 400879

JCM 15479,DSM 41884

@ref 20215

Last LPSN update 2026-05-29 08:28:46

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces prasinopilosus

Full scientific name Streptomyces prasinopilosus Ettlinger et al. 1958 (Approved Lists 1980)

Synonyms (1)

Streptomyces emeiensis

BacDive ID	Other strains from **Streptomyces prasinopilosus** (2)	Type strain
15480	S. prasinopilosus DSM 40098, ATCC 19799, CBS 551.68, IFO 12809, ... (type strain)
15481	S. prasinopilosus A 12, E-193, DSM 40884, ATCC 19092

Morphology

Cell morphology

@ref	Confidence	Gram stain
32082		positive
125439	92.899
125439	98.494	positive

Multimedia

@ref:	10647
multimedia content:	DSM_41884.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_41884.jpg
caption:	Medium 65 28°C
intellectual property rights:	© Leibniz-Institut DSMZ
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
10647	ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)		Medium recipe at MediaDive	Name: ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84) Composition: Agar 20.0 g/l Rolled oats 20.0 g/l ZnSO4 x 7 H2O 0.001 g/l MnCl2 x 4 H2O 0.001 g/l FeSO4 x 7 H2O 0.001 g/l Distilled water
10647	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
10647	positive	growth	28
32082	positive	growth	15-40
32082	positive	optimum	27.5
67770	positive	growth	28

Culture pH

@ref	Ability	Type	PH	PH range
32082	positive	optimum	7.5
32082	positive	growth	5.5-9.5	alkaliphile

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
32082	aerobe
125439	obligate aerobe	99.078

Spore formation

@ref	Spore formation	Confidence
32082
125439		91.606
125438		90.163

Halophily

@ref	Salt	Growth	Tested relation	Concentration
32082	NaCl	positive	growth	0.01-5.0 %
32082	NaCl	positive	optimum	2.5 %

Observation

67770

Observationquinones: MK-9(H₆), MK-9(H₈), MK-9(H₄)

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
32082	22599 ChEBI	arabinose	+	carbon source
32082	23652 ChEBI	dextrin	+	carbon source
32082	4853 ChEBI	esculin	+	hydrolysis
32082	17268 ChEBI	myo-inositol	+	carbon source
32082	17632 ChEBI	nitrate	+	reduction
32082	28044 ChEBI	phenylalanine	+	carbon source
32082	16634 ChEBI	raffinose	+	carbon source
32082	33942 ChEBI	ribose	+	carbon source
32082	53424 ChEBI	tween 20	+	carbon source
32082	53423 ChEBI	tween 40	+	carbon source

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Soil

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
10647	soil sample	Sichuan province, Emei mountain	China	CHN	Asia
67770	Soil from Emei Mountain	Sichuan Province	China	CHN	Asia

Taxonmaps

69479

Global distribution of 16S sequence DQ462649 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	3
Soil Samples	94
Animal Samples	8
Plant Samples	40
Total Samples	145

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
10647	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	IMG-taxon 2663762722 annotated assembly for Streptomyces prasinopilosus CGMCC 4.3504	scaffold	GCA_900101585	382503.6	2663762722	67344	72.78
67770	ASM141839v1 assembly for Streptomyces prasinopilosus NRRL B-24621	scaffold	GCA_001418395		2681813211	67344	0

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
10647	Streptomyces emeiensis strain 4776 16S ribosomal RNA gene, partial sequence	DQ462649	1400		67344

GC content

@ref	GC-content (mol%)	Method
10647	70.8
67770	70.8	thermal denaturation, midpoint method (Tm)
67770	72.9	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: IMG-taxon 2663762722 annotated assembly for Streptomyces prasinopilosus CGMCC 4.3504
NCBI: GCA_900101585

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.08	no
125439	gram_stain	BacteriaNetⓘ	positive	98.49	no
125439	motility	BacteriaNetⓘ	no	92.90	no
125439	spore_formation	BacteriaNetⓘ	yes	91.61	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces emeiensis strain CGMCC 4.3504
PATRIC: 382503.6

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.08	yes
125438	anaerobic	anaerobicⓘ	no	96.87	yes
125438	spore-forming	spore-formingⓘ	yes	90.16	no
125438	aerobic	aerobicⓘ	yes	89.29	yes
125438	thermophilic	thermophileⓘ	no	95.00	yes
125438	flagellated	motile2+ⓘ	no	89.99	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces emeiensis sp. nov., a novel streptomycete from soil in China.	Sun W, Huang Y, Zhang YQ, Liu ZH	Int J Syst Evol Microbiol	10.1099/ijs.0.64934-0	2007

References

#10647	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 41884
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#28328	IJSEM 1635 2007 ( DOI 10.1099/ijs.0.64934-0 , PubMed 17625208 )
#32082	Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #28328
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Content

About us

Streptomyces prasinopilosus (DSM 41884, CGMCC 4.3504, NRRL B-24621)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Observation

Metabolite utilization

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_900101585

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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