Streptomyces althioticus (DSM 40188, ATCC 23935, CBS 919.68)

Name: Streptomyces althioticus (DSM 40188, ATCC 23935, CBS 919.68)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 15397

Type strain

Strain Designation M-ME/17

Culture col. no. DSM 40188 ATCC 23935 CBS 919.68 ETH 24398 IFO 12889 14 more

NCBI tax ID(s) 67325

Special Collections DSMZ JCM JMRC

History DSMZ <- E.B. Shirling, ISP <- L.G. Silvestri, Lepetit S.p.A. Lep., M-ME/17 JCM <-- KCC S-0268 <-- RIA 570 <-- Lepetit M-ME/17.

Links

Streptomyces althioticus M-ME/17 is a bacterium that produces antibiotic compounds and was isolated from sea sand.

antibiotic compound production genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 389347

ATCC 23935,IFO 12889,DSM 40188,JCM 4268,JCM 4277,IMET 42065,NCIMB 9826,NRRL B-2576,JCM 4651,CBS 919.68,NBRC 12889,HAMBI 1048,BCRC 13785,CCRC 13785,NCIB 9826

@ref 20215

Last LPSN update 2026-05-29 08:28:32

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Kitasatosporales

Family Streptomycetaceae

Genus Streptomyces

Species Streptomyces althioticus

Full scientific name Streptomyces althioticus Yamaguchi et al. 1957 (Approved Lists 1980)

Synonyms (3)

Streptomyces matensis
Streptomyces griseorubens
"Actinomyces griseorubens"

BacDive ID	Other strains from **Streptomyces althioticus** (1)	Type strain
14970	S. althioticus 245-22, DSM 40092, ATCC 19724, CBS 463.68, ... (type strain)

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	positive	90.446
125439	positive	99.354
125439		92.444

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
9250	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)		Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
9250	positive	growth	37
67770	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	aerobe	91.859
125439	obligate aerobe	99.32

Spore formation

@ref	Spore formation	Confidence
125438		93.25

Compound production

@ref	Compound
9250	matamycin
9250	althiomycin
20216	Matamycin (Althiomycin)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
67770	157683 ChEBI	althiomycin

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Aquatic	#Marine
#Environmental	#Terrestrial	#Sandy

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
9250	sea sand	Sicily	Italy	ITA	Europe
67770	Sea sand	Catania	Italy	ITA	Europe

Taxonmaps

69479

Global distribution of 16S sequence EF626596 (>99% sequence identity) for Streptomyces from Microbeatlas

Aquatic Samples	0
Soil Samples	30
Animal Samples	18
Plant Samples	2
Total Samples	50

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
9250	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM1464917v1 assembly for Streptomyces matensis JCM 4277	scaffold	GCA_014649175	67325.3	8109807904	67325	41.99

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Streptomyces matensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4651	D44286	122	67325
20218	Streptomyces matensis gene for 16S rRNA, partial sequence, strain: NBRC 12889	AB184221	1462	67325
20218	Streptomyces matensis strain NRRL B-2576 16S ribosomal RNA gene, partial sequence	EF626596	1498	67325
124043	Streptomyces matensis strain JCM 4277 16S ribosomal RNA gene, partial sequence.	MT760503	1340	67325

GC content

@ref	GC-content (mol%)	Method
67770	72.6	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM1464917v1 assembly for Streptomyces matensis JCM 4277
NCBI: GCA_014649175

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.32	no
125439	motility	BacteriaNetⓘ	no	92.44	no
125439	gram_stain	BacteriaNetⓘ	positive	99.35	no
125439	spore_formation	BacteriaNetⓘ	yes	89.15	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Streptomyces matensis strain JCM 4277
PATRIC: 67325.3

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	90.45	no
125438	anaerobic	anaerobicⓘ	no	97.40	no
125438	spore-forming	spore-formingⓘ	yes	93.25	no
125438	aerobic	aerobicⓘ	yes	91.86	no
125438	thermophilic	thermophileⓘ	no	97.00	yes
125438	flagellated	motile2+ⓘ	no	89.00	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Enzymology	Molecular cloning and functional characterization of an endo-beta-1,3-glucanase from Streptomyces matensis ATCC 23935.	Woo JB, Kang HN, Woo EJ, Lee SB	Food Chem	10.1016/j.foodchem.2013.09.137	2013
Phylogeny	Streptomyces lichenis sp. nov., isolated from lichen.	Saeng-In P, Phongsopitanun W, Savarajara A, Tanasupawat S	Int J Syst Evol Microbiol	10.1099/ijsem.0.003052	2018
Phylogeny	Streptomyces fuscigenes sp. nov., isolated from bamboo (Sasa borealis) litter.	Lee HJ, Whang KS	Int J Syst Evol Microbiol	10.1099/ijsem.0.002706	2018
Phylogeny	Streptomyces wuyuanensis sp. nov., an actinomycete from soil.	Zhang X, Zhang J, Zheng J, Xin D, Xin Y, Pang H	Int J Syst Evol Microbiol	10.1099/ijs.0.047050-0	2013

References

#9250	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40188
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20216	Curators of the JMRC: Jena Microbial Resource Collection (JMRC):
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Streptomyces althioticus (DSM 40188, ATCC 23935, CBS 919.68)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Compound production

Metabolite production

Isolation, sampling and environmental information

Isolation source categories

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_014649175

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

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