Name: Streptomyces mashuensis 449
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 15393

Type strain:

Species: Streptomyces mashuensis

Strain Designation: 449, NNRL B-3352, NNRL B-8164

Culture col. no.: DSM 40221, ATCC 23934, CBS 918.68, IFO 12888, ISP 5221, JCM 4059, JCM 4650, NBRC 12888, RIA 1165, BCRC 12420, CBS 279.65, CGMCC 4.2007, CIP 108143, IFM 1082, IMET 42941, LMG 8603, NCB 258, NRRL B-3352, NRRL B-8164, VKM Ac-949, CCRC 12420, KCC S-0650

Strain history: CIP <- 2003, JCM <- 1983, KCC <- IFO <- SAJ <- ISP <- S. Suzuki: strain 449

NCBI tax ID(s): 33904 (species)

SI-ID 389332

ATCC 23934, IFO 12888, DSM 40221, JCM 4059, JCM 4650, CCRC 12420, IMET 42941, NRRL B-3352, NRRL B-8164, VKM Ac-949, CBS 279.65, LMG 8603, NBRC 12888, BCRC 12420, CIP 108143, CGMCC 4.2007

Other strains from Streptomyces mashuensis

S. mashuensis DSM 40397, ATCC 25464, CBS 697.69, ...
S. mashuensis DSM 40896, DSM 41490, IAM 3682 ...
S. mashuensis ST027559(HKI),

Section

Streptomyces mashuensis 449 is an obligate aerobe, spore-forming, mesophilic bacterium that builds an aerial mycelium and produces antibiotic compounds.

antibiotic compound production
spore-forming
mesophilic
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces mashuensis**
	Full Scientific Name (LPSN)	Streptomyces mashuensis (Sawazaki et al. 1955) Witt and Stackebrandt 1991

	Synonym	Streptoverticillium kishiwadense
	Synonym	Streptoverticillium mashuense
	Synonym	"Streptomyces* kishiwadensis"*
	Synonym	"Streptomyces* mashuensis"*

Information on morphological and physiological properties Morphology

[Ref.: #120845]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #120845]	Cell shape	filament-shaped

[Ref.: #120845]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %91.094

[Ref.: #120845]	Hemolysis ability	1

[Ref.: #19424]	Colony color	Brown
[Ref.: #19424]	Incubation period	10-14 days
[Ref.: #19424]	Cultivation medium used	ISP 2

[Ref.: #19424]	Colony color	Yellow
[Ref.: #19424]	Incubation period	10-14 days
[Ref.: #19424]	Cultivation medium used	ISP 3

[Ref.: #19424]	Colony color	Yellow
[Ref.: #19424]	Incubation period	10-14 days
[Ref.: #19424]	Cultivation medium used	ISP 4

[Ref.: #19424]	Colony color	Brown
[Ref.: #19424]	Incubation period	10-14 days
[Ref.: #19424]	Cultivation medium used	ISP 6

[Ref.: #19424]	Colony color	Brown
[Ref.: #19424]	Incubation period	10-14 days
[Ref.: #19424]	Cultivation medium used	ISP 7

[Ref.: #19424]	Incubation period	10-14 days
[Ref.: #19424]	Cultivation medium used	ISP 5

[Ref.: #19424]	Multicellular complex forming ability	yes
[Ref.: #19424]	Multicellular complex name	Aerial Mycelium
[Ref.: #19424]	Multicellular complex color	Rose
[Ref.: #19424]	Medium Name (multicellularity)	ISP 2

[Ref.: #19424]	Multicellular complex forming ability	yes
[Ref.: #19424]	Multicellular complex name	Aerial Mycelium
[Ref.: #19424]	Multicellular complex color	Brown red
[Ref.: #19424]	Medium Name (multicellularity)	ISP 3

[Ref.: #19424]	Multicellular complex forming ability	yes
[Ref.: #19424]	Multicellular complex name	Aerial Mycelium
[Ref.: #19424]	Multicellular complex color	Brown red
[Ref.: #19424]	Medium Name (multicellularity)	ISP 4

[Ref.: #19424]	Multicellular complex forming ability	yes
[Ref.: #19424]	Multicellular complex name	Aerial Mycelium
[Ref.: #19424]	Multicellular complex color	Brown red
[Ref.: #19424]	Medium Name (multicellularity)	ISP 5

[Ref.: #19424]	Multicellular complex forming ability	no
[Ref.: #19424]	Medium Name (multicellularity)	ISP 6

[Ref.: #19424]	Multicellular complex forming ability	yes
[Ref.: #19424]	Multicellular complex name	Aerial Mycelium
[Ref.: #19424]	Multicellular complex color	Brown red
[Ref.: #19424]	Medium Name (multicellularity)	ISP 7

Information on culture and growth conditions Culture and growth conditions

[Ref.: #9278]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #9278]

Culture medium growth

[Ref.: #9278]

Culture medium link

Medium recipe at MediaDive

[Ref.: #9278]

Culture medium composition

expand / minimize

[Ref.: #19424]

Culture medium

ISP 2

[Ref.: #19424]

Culture medium growth

[Ref.: #19424]

Culture medium composition

expand / minimize

[Ref.: #19424]

Culture medium

ISP 3

[Ref.: #19424]

Culture medium growth

[Ref.: #19424]

Culture medium composition

expand / minimize

[Ref.: #19424]

Culture medium

ISP 4

[Ref.: #19424]

Culture medium growth

[Ref.: #19424]

Culture medium composition

expand / minimize

[Ref.: #19424]

Culture medium

ISP 5

[Ref.: #19424]

Culture medium growth

[Ref.: #19424]

Culture medium composition

expand / minimize

[Ref.: #19424]

Culture medium

ISP 6

[Ref.: #19424]

Culture medium growth

[Ref.: #19424]

Culture medium composition

expand / minimize

[Ref.: #19424]

Culture medium

ISP 7

[Ref.: #19424]

Culture medium growth

[Ref.: #19424]

Culture medium composition

expand / minimize

[Ref.: #37415]

Culture medium

MEDIUM 57 - for Streptomyces, Nocardioides, Lentzea albidocapillata and Streptoverticillium reticulum

[Ref.: #37415]

Culture medium growth

[Ref.: #37415]

Culture medium composition

expand / minimize

[Ref.: #9278]

Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

[Ref.: #9278]

Culture medium growth

[Ref.: #9278]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #120845]

Culture medium

CIP Medium 57

[Ref.: #120845]

Culture medium growth

[Ref.: #120845]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #9278]		growth	28 °C
[Ref.: #37415]		growth	30 °C
[Ref.: #67770]		growth	28 °C
[Ref.: #120845]		growth	25-45 °C
[Ref.: #120845]	no	growth	10 °C

[Ref.: #9278]	Temperature range	mesophilic
[Ref.: #37415]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #120845]	Temperature range	psychrophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #120845]

Oxygen tolerance

obligate aerobe

[Ref.: #19424]	Spore description	Formation of spore chains: verticillus, spore surface: smooth
[Ref.: #19424]	Ability of spore formation	yes
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

[Ref.: #9278]	Name of produced compound	streptomycin
[Ref.: #9278]	Name of produced compound	anti-fungal polyene antibiotic
[Ref.: #20216]	Name of produced compound	Streptomycin
[Ref.: #20216]	Name of produced compound	Antifungal antibiotic agent

	Salt	Tested relation		Salt conc.
[Ref.: #120845]	NaCl		growth	0-2	%
[Ref.: #120845]	NaCl	no	growth	4	%
[Ref.: #120845]	NaCl	no	growth	6	%
[Ref.: #120845]	NaCl	no	growth	8	%
[Ref.: #120845]	NaCl	no	growth	10	%

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #19424]	arabinose ChEBI	-
[Ref.: #68368]	arginine ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19424]	cellulose ChEBI	-
[Ref.: #120845]	citrate ChEBI	-	carbon source
[Ref.: #68368]	citrate ChEBI	-	assimilation	* from API 20E
[Ref.: #120845]	esculin ChEBI	-	hydrolysis
[Ref.: #19424]	fructose ChEBI	+
[Ref.: #68368]	gelatin ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19424]	glucose ChEBI	+
[Ref.: #120845]	hippurate ChEBI	+	hydrolysis
[Ref.: #68368]	lysine ChEBI	-	degradation	* from API 20E
[Ref.: #19424]	mannitol ChEBI	-
[Ref.: #19424]	myo-inositol ChEBI	+
[Ref.: #120845]	nitrate ChEBI	-	reduction
[Ref.: #120845]	nitrate ChEBI	-	respiration
[Ref.: #120845]	nitrite ChEBI	-	reduction
[Ref.: #68368]	ornithine ChEBI	-	degradation	* from API 20E
[Ref.: #19424]	raffinose ChEBI	-
[Ref.: #19424]	rhamnose ChEBI	-
[Ref.: #19424]	sucrose ChEBI	+
[Ref.: #68368]	tryptophan ChEBI	-	energy source	* from API 20E
[Ref.: #68368]	urea ChEBI	-	hydrolysis	* from API 20E
[Ref.: #19424]	xylose ChEBI	-
	Only first 10 entries are displayed. Click here to see all.

	Metabolite	Production
[Ref.: #120845]	indole ChEBI	no
[Ref.: #67770]	streptomycin ChEBI	yes
[Ref.: #68368]	acetoin ChEBI	yes	* from API 20E
[Ref.: #68368]	hydrogen sulfide ChEBI	no	* from API 20E
[Ref.: #68368]	indole ChEBI	no	* from API 20E

	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #120845]	acetoin ChEBI	+
[Ref.: #120845]	glucose ChEBI		-
[Ref.: #68368]	acetoin ChEBI	+			* from API 20E
[Ref.: #68368]	indole ChEBI			-	* from API 20E

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #120845]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #120845]	amylase	+
[Ref.: #68368]	arginine dihydrolase	-	3.5.3.6	* from API 20E
[Ref.: #120845]	beta-galactosidase	-	3.2.1.23
[Ref.: #68368]	beta-galactosidase	-	3.2.1.23	* from API 20E, API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #120845]	caseinase	+	3.4.21.50
[Ref.: #120845]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	+	3.4.11.3	* from API zym
[Ref.: #120845]	DNase	+
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #120845]	gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #120845]	gelatinase	+
[Ref.: #68368]	gelatinase	-		* from API 20E
[Ref.: #120845]	lecithinase	+
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #120845]	lipase	+
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #120845]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68368]	lysine decarboxylase	-	4.1.1.18	* from API 20E
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #120845]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #68368]	ornithine decarboxylase	-	4.1.1.17	* from API 20E
[Ref.: #120845]	oxidase	-
[Ref.: #120845]	phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #120845]	protease	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #120845]	tryptophan deaminase	-
[Ref.: #68368]	tryptophan deaminase	-	4.1.99.1	* from API 20E
[Ref.: #120845]	tween esterase	-
[Ref.: #120845]	urease	+	3.5.1.5
[Ref.: #68368]	urease	-	3.5.1.5	* from API 20E
[Ref.: #68382]	valine arylamidase	+		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® 20E:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	beta-GalactosidaseONPG	Arginine dihydrolaseADH (Arg)	Lysine decarboxylaseLDC (Lys)	Ornithine decarboxylaseODC	Citrate utilizationCIT	H2S productionH2S	Urease/urea hydrolysisURE	Tryptophan deaminaseTDA (Trp)	Indole productionIND	Acetoin production (Voges Proskauer test)VP	Gelatinase/gelatin hydrolysisGEL	Fermentation/oxidation of D-glucoseGLU	Fermentation/oxidation of D-mannitolMAN	Fermentation/oxidation of inositolINO	Fermentation/oxidation of sorbitolSor	Fermentation/oxidation of L-rhamnoseRHA	Fermentation/oxidation of sucroseSAC	Fermentation/oxidation of melibioseMEL	Fermentation/oxidation of amygdalinAMY	Fermentation/oxidation of L-arabinoseARA	Cytochrome oxidaseOX	Nitrite productionNO2	Reduction to N2N2	MotilityMOB	Growth on MacConkey mediumMAC	Oxidative catabolisation of D-glucoseOF-O	Fermentation of D-glucoseOF-F
[Ref.: #19424]	288	-	-	-	-	-	-	-	-	-	+	-	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.	not determinedn.d.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #120845]	2601	not determinedn.d.	+	+	-	+	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	+	+	-	+	-	-	+	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #120845]	10923	-	+	+	-	-	+	+	+	-	-	+	+	-	-	-	-	-	-	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9278]	Sample type/isolated from	soil
[Ref.: #9278]	Country	Japan
[Ref.: #9278]	Country ISO 3 Code	JPN
[Ref.: #9278]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Lake Mashu, Hokkaido
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia

[Ref.: #120845]	Sample type/isolated from	Environment, Soil
[Ref.: #120845]	Geographic location (country and/or sea, region)	Mashu lake, Hokkaido
[Ref.: #120845]	Country	Japan
[Ref.: #120845]	Country ISO 3 Code	JPN
[Ref.: #120845]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #9278]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #19424]	Biosafety level	1	Risk group (German classification)
[Ref.: #120845]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Streptomyces mashuensis 16S ribosomal RNA gene, partial sequence	U72173	270	ENA	33904 tax ID	*
[Ref.: #20218]	Streptomyces mashuensis strain DSM 40221 16S ribosomal RNA gene, partial sequence	FJ406118	1362	ENA	33904 tax ID	*
[Ref.: #20218]	Streptomyces mashuensis strain DSM 40221 16S ribosomal RNA gene, partial cds	GU383221	782	ENA	33904 tax ID	*
[Ref.: #20218]	Streptomyces mashuensis 16S rRNA gene, strain DSM40221	X79323	1518	ENA	33904 tax ID	*
[Ref.: #20218]	Streptomyces mashuensis gene for 16S ribosomal RNA, partial sequence, strain: JCM 4059	D43993	121	ENA	33904 tax ID	*
[Ref.: #20218]	Streptomyces mashuensis gene for 16S rRNA, partial sequence, strain: NBRC 12888	AB184852	1461	ENA	33904 tax ID	*
[Ref.: #20218]	Streptomyces mashuensis strain NRRL B-8164T 16S ribosomal RNA gene, partial sequence	DQ442526	1489	ENA	33904 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces mashuensis JCM 4059	GCA_014654785	contig	GenBank	33904 tax ID	*
[Ref.: #66792]	Streptomyces mashuensis strain JCM 4059	33904.3	wgs	PATRIC	33904 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces mashuensis strain JCM 4059 PATRIC: 33904.3
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces mashuensis strain JCM 4059 PATRIC: 33904.3
[Ref.: #69480]	gram-positive	yes	87.991	no
[Ref.: #69480]	anaerobic	no	99.116	no
[Ref.: #69480]	halophile	no	93.803	no
[Ref.: #69480]	spore-forming	yes	92.669	yes
[Ref.: #69480]	glucose-util	yes	90.172	yes
[Ref.: #69480]	motile	no	92.124	no
[Ref.: #69480]	flagellated	no	97.383	no
[Ref.: #69480]	thermophile	no	95.267	no
[Ref.: #69480]	aerobic	yes	90.799	no
[Ref.: #69480]	glucose-ferment	no	90.24	no

Availability in culture collections External links

[Ref.: #9278]

Culture collection no.

DSM 40221, ATCC 23934, CBS 918.68, IFO 12888, ISP 5221, JCM 4059, JCM 4650, NBRC 12888, RIA 1165, BCRC 12420, CBS 279.65, CGMCC 4.2007, CIP 108143, IFM 1082, IMET 42941, LMG 8603, NCB 258, NRRL B-3352, NRRL B-8164, VKM Ac-949, CCRC 12420, KCC S-0650

[Ref.: #84483]

SI-ID 389332

References

#9278

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40221

#19424

Wink, J.: Compendium of Actinobacteria. HZI-Helmholtz-Centre for Infection Research, Braunschweig .

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#37415 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68368

Automatically annotated from API 20E .

#68382

Automatically annotated from API zym .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#84483

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID389332.1 )

#120845 Collection of Institut Pasteur ; Curators of the CIP; CIP 108143
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Streptomyces mashuensis in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Streptomyces mashuensis strain JCM 4059

Streptomyces mashuensis strain JCM 4059

Change proposal

Change proposal