Lactobacillus rhamnosus (CCUG 35564)

Name: Lactobacillus rhamnosus (CCUG 35564)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 148506

Type strain

Culture col. no. CCUG 35564

NCBI tax ID(s) 47715

Special Collections CCUG

Links

Lactobacillus rhamnosus CCUG 35564 is a bacterium that was isolated from Human liver lobe.

Bacteria

Name and taxonomic classification

SI-ID 55056

CCUG 35564

@ref 20215

Last LPSN update 2026-05-29 08:41:42

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Lactobacillales

Family Lactobacillaceae

Genus Lactobacillus

Species Lactobacillus rhamnosus

Full scientific name Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989

Synonyms (2)

Lacticaseibacillus rhamnosus
Lactobacillus casei subsp. rhamnosus

BacDive ID	Other strains from **Lactobacillus rhamnosus** (157)	Type strain
134883	L. rhamnosus 686.86, CIP 102683
134884	L. rhamnosus 685.86, CIP 102684
134889	L. rhamnosus 688.86, CIP 102689
134890	L. rhamnosus 694.86, CIP 102690
135285	L. rhamnosus 615-76, CIP 110096
135369	L. rhamnosus CIP 110101
135490	L. rhamnosus 64AC, CIP 103700
135677	L. rhamnosus C8, CIP 71.38, NCTC 10302
135853	L. rhamnosus 71-86, CIP 102139
135883	L. rhamnosus CIP 103765
135977	L. rhamnosus 820.85, CIP 101938
136041	L. rhamnosus 12.86, CIP 102084
136075	L. rhamnosus 286-86, CIP 102308
136117	L. rhamnosus 620-86, CIP 102623
136965	L. rhamnosus Nills, CIP A158
137030	L. rhamnosus CIP 110103
137039	L. rhamnosus 118-76, CIP 110095
137066	L. rhamnosus CIP 104456
137406	L. rhamnosus 815.85, CIP 101937
137632	L. rhamnosus 575.86, CIP 102582
137644	L. rhamnosus 60F, CIP 103703
137686	L. rhamnosus 599-86, CIP 102599
137767	L. rhamnosus 237.85, CIP 101501
137867	L. rhamnosus 973.85, CIP 101990
137878	L. rhamnosus 171-86, CIP 102102
137885	L. rhamnosus 217-86, CIP 102109
137899	L. rhamnosus 77-86, CIP 102146
137910	L. rhamnosus P64-P74, 93-86, CIP 102168
137972	L. rhamnosus 331-86, CIP 102339
137994	L. rhamnosus 431-86, CIP 102430
138067	L. rhamnosus 644.86, CIP 102647
138582	L. rhamnosus 784.81, CIP 110112, CIP 203036
138603	L. rhamnosus 146-86, CIP 102206
138750	L. rhamnosus 743.86, CIP 102751
138817	L. rhamnosus 582.81, CIP 110113, CIP 203054
138821	L. rhamnosus 342.82, CIP 110114, CIP 203037
138870	L. rhamnosus FEV, CIP 103888
138913	L. rhamnosus CIP A160
139022	L. rhamnosus 183-80, CIP 110097
139023	L. rhamnosus 707-87, CIP 110098
139025	L. rhamnosus CIP 110107
143247	L. rhamnosus CCUG 18011, CCUG 17659-61
143532	L. rhamnosus CCUG 19908 A
144029	L. rhamnosus CCUG 22413
144179	L. rhamnosus CCUG 23335, LMG 10768
144537	L. rhamnosus CCUG 25594, LMG 10770
144972	L. rhamnosus CCUG 27333, LMG 10775
145012	L. rhamnosus CCUG 27405
145158	L. rhamnosus CCUG 27772
145340	L. rhamnosus CCUG 28228
145351	L. rhamnosus CCUG 28262
145475	L. rhamnosus CCUG 28641
145589	L. rhamnosus CCUG 28899
145668	L. rhamnosus CCUG 29185
145697	L. rhamnosus CCUG 29281
145824	L. rhamnosus CCUG 29713
145969	L. rhamnosus CCUG 30036
145977	L. rhamnosus CCUG 30069
146185	L. rhamnosus CCUG 30541
146213	L. rhamnosus CCUG 30616
146224	L. rhamnosus CCUG 30651, LMG ID239
146277	L. rhamnosus CCUG 30775
146443	L. rhamnosus CCUG 31152
146463	L. rhamnosus CCUG 31211
146480	L. rhamnosus CCUG 31262
146558	L. rhamnosus CCUG 31435
146625	L. rhamnosus CCUG 31644
146628	L. rhamnosus CCUG 31651
146701	L. rhamnosus CCUG 31975
146788	L. rhamnosus CCUG 32120
146803	L. rhamnosus CCUG 32140
147070	L. rhamnosus CCUG 32788
147259	L. rhamnosus CCUG 33218
147325	L. rhamnosus CCUG 33371
147416	L. rhamnosus CCUG 33557
147421	L. rhamnosus CCUG 33564
147426	L. rhamnosus CCUG 33570
147464	L. rhamnosus CCUG 33615
147466	L. rhamnosus CCUG 33617
147485	L. rhamnosus CCUG 33683
147486	L. rhamnosus CCUG 33684
147494	L. rhamnosus CCUG 33698
147539	L. rhamnosus CCUG 33766
147792	L. rhamnosus CCUG 34241
147820	L. rhamnosus CCUG 34291, ATCC 53103, LMG 18243
147830	L. rhamnosus CCUG 34333
147891	L. rhamnosus CCUG 34440
147925	L. rhamnosus CCUG 34509
147988	L. rhamnosus CCUG 34627
148014	L. rhamnosus CCUG 34682, ATCC 11982, JCM 8135, NCFB 252, ...
148151	L. rhamnosus CCUG 34906
148160	L. rhamnosus CCUG 34939
148218	L. rhamnosus CCUG 35058 B
148377	L. rhamnosus CCUG 35317
148457	L. rhamnosus CCUG 35475
148550	L. rhamnosus CCUG 35626
148602	L. rhamnosus CCUG 35693
148615	L. rhamnosus CCUG 35719
148619	L. rhamnosus CCUG 35727
148891	L. rhamnosus CCUG 36553
148984	L. rhamnosus CCUG 36679
149081	L. rhamnosus CCUG 36831
149107	L. rhamnosus CCUG 36863
149202	L. rhamnosus CCUG 37262
149228	L. rhamnosus CCUG 37304
149540	L. rhamnosus CCUG 37932
149556	L. rhamnosus CCUG 37953
149589	L. rhamnosus CCUG 38019
149736	L. rhamnosus CCUG 38299
149777	L. rhamnosus CCUG 38381
149845	L. rhamnosus CCUG 38532
149994	L. rhamnosus CCUG 38814
150063	L. rhamnosus CCUG 38938
150139	L. rhamnosus CCUG 39078
150161	L. rhamnosus CCUG 39143
150315	L. rhamnosus CCUG 39619
150513	L. rhamnosus CCUG 41464
150533	L. rhamnosus CCUG 41508
150788	L. rhamnosus CCUG 42331
150963	L. rhamnosus CCUG 42872
150980	L. rhamnosus CCUG 42929
151030	L. rhamnosus CCUG 43101
151075	L. rhamnosus CCUG 43219
151089	L. rhamnosus CCUG 43245
151101	L. rhamnosus CCUG 43276
151191	L. rhamnosus CCUG 43430
151348	L. rhamnosus CCUG 43810
151404	L. rhamnosus CCUG 44047
151427	L. rhamnosus CCUG 44070
151509	L. rhamnosus CCUG 44167
151541	L. rhamnosus CCUG 44260
151546	L. rhamnosus CCUG 44276
151699	L. rhamnosus CCUG 44667
151718	L. rhamnosus CCUG 44704
151850	L. rhamnosus CCUG 45047
151860	L. rhamnosus CCUG 45071
152096	L. rhamnosus CCUG 45734
152250	L. rhamnosus CCUG 46209
152498	L. rhamnosus CCUG 46941
152647	L. rhamnosus CCUG 47283
152677	L. rhamnosus CCUG 47333
152726	L. rhamnosus CCUG 47485
153524	L. rhamnosus CCUG 50041
153632	L. rhamnosus CCUG 50428
155353	L. rhamnosus CCUG 57433
156175	L. rhamnosus CCUG 60618
156181	L. rhamnosus CCUG 60636
156403	L. rhamnosus CCUG 61588
173535	L. rhamnosus CIMB 05-2340, CRBIP17.86
173536	L. rhamnosus CRBIP24.160
173537	L. rhamnosus CRBIP24.29
173538	L. rhamnosus CRBIP24.37
173539	L. rhamnosus CRBIP24.38
173540	L. rhamnosus CRBIP24.51
173541	L. rhamnosus CRBIP24.67
173542	L. rhamnosus ART, CRBIP24.70
173543	L. rhamnosus CRBIP24.75

Morphology

Culture and growth conditions

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68381	40585 ChEBI	alpha-cyclodextrin	-	builds acid from	from API rID32STR
68381	29016 ChEBI	arginine	-	hydrolysis	from API rID32STR
68381	18333 ChEBI	D-arabitol	-	builds acid from	from API rID32STR
68381	16899 ChEBI	D-mannitol	+	builds acid from	from API rID32STR
68381	16988 ChEBI	D-ribose	+	builds acid from	from API rID32STR
68381	16443 ChEBI	D-tagatose	+	builds acid from	from API rID32STR
68381	28087 ChEBI	glycogen	-	builds acid from	from API rID32STR
68381	606565 ChEBI	hippurate	+	hydrolysis	from API rID32STR
68381	30849 ChEBI	L-arabinose	-	builds acid from	from API rID32STR
68381	17716 ChEBI	lactose	-	builds acid from	from API rID32STR
68381	17306 ChEBI	maltose	-	builds acid from	from API rID32STR
68381	6731 ChEBI	melezitose	+	builds acid from	from API rID32STR
68381	28053 ChEBI	melibiose	-	builds acid from	from API rID32STR
68381	320055 ChEBI	methyl beta-D-glucopyranoside	+	builds acid from	from API rID32STR
68381	27941 ChEBI	pullulan	-	builds acid from	from API rID32STR
68381	16634 ChEBI	raffinose	-	builds acid from	from API rID32STR
68381	30911 ChEBI	sorbitol	-	builds acid from	from API rID32STR
68381	17992 ChEBI	sucrose	-	builds acid from	from API rID32STR
68381	27082 ChEBI	trehalose	+	builds acid from	from API rID32STR
68381	16199 ChEBI	urea	-	hydrolysis	from API rID32STR

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68381	15688 ChEBI	acetoin		from API rID32STR

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test
68381	15688 ChEBI	acetoin	+	from API rID32STR

Enzymes

@ref	Value	Activity	Ec
68381	Alanyl-Phenylalanyl-Proline arylamidase	-		from API rID32STR
68381	alkaline phosphatase	-	3.1.3.1	from API rID32STR
68381	alpha-galactosidase	-	3.2.1.22	from API rID32STR
68381	arginine dihydrolase	-	3.5.3.6	from API rID32STR
68381	beta-galactosidase	+	3.2.1.23	from API rID32STR
68381	beta-glucosidase	+	3.2.1.21	from API rID32STR
68381	beta-glucuronidase	-	3.2.1.31	from API rID32STR
68381	beta-mannosidase	-	3.2.1.25	from API rID32STR
68381	glycyl tryptophan arylamidase	-		from API rID32STR
68381	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API rID32STR
68381	pyrrolidonyl arylamidase	+	3.4.19.3	from API rID32STR
68381	urease	-	3.5.1.5	from API rID32STR

Pathway annotation

Computationally determined by

@ref	pathway	enzyme coverage	annotated reactions
66794	gluconeogenesis	100	8 of 8
66794	C4 and CAM-carbon fixation	100	8 of 8
66794	acetate fermentation	100	4 of 4
66794	ribulose monophosphate pathway	100	2 of 2
66794	ppGpp biosynthesis	100	4 of 4
66794	coenzyme A metabolism	100	4 of 4
66794	CDP-diacylglycerol biosynthesis	100	2 of 2
66794	UDP-GlcNAc biosynthesis	100	3 of 3
66794	cis-vaccenate biosynthesis	100	2 of 2
66794	ceramide biosynthesis	100	1 of 1
66794	folate polyglutamylation	100	1 of 1
66794	anapleurotic synthesis of oxalacetate	100	1 of 1
66794	methylglyoxal degradation	100	5 of 5
66794	acetoin degradation	100	3 of 3
66794	palmitate biosynthesis	90.91	20 of 22
66794	pentose phosphate pathway	90.91	10 of 11
66794	aspartate and asparagine metabolism	88.89	8 of 9
66794	peptidoglycan biosynthesis	86.67	13 of 15
66794	vitamin B1 metabolism	84.62	11 of 13
66794	degradation of sugar alcohols	81.25	13 of 16
66794	starch degradation	80	8 of 10
66794	glycogen metabolism	80	4 of 5
66794	threonine metabolism	80	8 of 10
66794	pyrimidine metabolism	75.56	34 of 45
66794	purine metabolism	75.53	71 of 94
66794	glycogen biosynthesis	75	3 of 4
66794	NAD metabolism	72.22	13 of 18
66794	propanol degradation	71.43	5 of 7
66794	cardiolipin biosynthesis	71.43	5 of 7
66794	photosynthesis	71.43	10 of 14
66794	glycolysis	70.59	12 of 17
66794	myo-inositol biosynthesis	70	7 of 10
66794	phenylalanine metabolism	69.23	9 of 13
66794	methionine metabolism	69.23	18 of 26
66794	glutamate and glutamine metabolism	67.86	19 of 28
66794	cyanate degradation	66.67	2 of 3
66794	formaldehyde oxidation	66.67	2 of 3
66794	valine metabolism	66.67	6 of 9
66794	degradation of hexoses	66.67	12 of 18
66794	L-lactaldehyde degradation	66.67	2 of 3
66794	d-xylose degradation	63.64	7 of 11
66794	ketogluconate metabolism	62.5	5 of 8
66794	dTDPLrhamnose biosynthesis	62.5	5 of 8
66794	glycine betaine biosynthesis	60	3 of 5
66794	3-chlorocatechol degradation	60	3 of 5
66794	lipoate biosynthesis	60	3 of 5
66794	factor 420 biosynthesis	60	3 of 5
66794	Entner Doudoroff pathway	60	6 of 10
66794	oxidative phosphorylation	59.34	54 of 91
66794	non-pathway related	57.89	22 of 38
66794	degradation of pentoses	57.14	16 of 28
66794	ubiquinone biosynthesis	57.14	4 of 7
66794	CO2 fixation in Crenarchaeota	55.56	5 of 9
66794	serine metabolism	55.56	5 of 9
66794	d-mannose degradation	55.56	5 of 9
66794	metabolism of disaccharids	54.55	6 of 11
66794	proline metabolism	54.55	6 of 11
66794	degradation of sugar acids	52	13 of 25
66794	alanine metabolism	51.72	15 of 29
66794	histidine metabolism	51.72	15 of 29
66794	cyclohexanol degradation	50	2 of 4
66794	sulfopterin metabolism	50	2 of 4
66794	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	50	4 of 8
66794	tryptophan metabolism	50	19 of 38
66794	selenocysteine biosynthesis	50	3 of 6
66794	butanoate fermentation	50	2 of 4
66794	adipate degradation	50	1 of 2
66794	isoleucine metabolism	50	4 of 8
66794	ethanol fermentation	50	1 of 2
66794	tetrahydrofolate metabolism	50	7 of 14
66794	suberin monomers biosynthesis	50	1 of 2
66794	glutathione metabolism	50	7 of 14
66794	cysteine metabolism	50	9 of 18
66794	reductive acetyl coenzyme A pathway	42.86	3 of 7
66794	mevalonate metabolism	42.86	3 of 7
66794	isoprenoid biosynthesis	42.31	11 of 26
66794	degradation of aromatic, nitrogen containing compounds	41.67	5 of 12
66794	ascorbate metabolism	40.91	9 of 22
66794	lysine metabolism	40.48	17 of 42
66794	ethylmalonyl-CoA pathway	40	2 of 5
66794	metabolism of amino sugars and derivatives	40	2 of 5
66794	glycine metabolism	40	4 of 10
66794	cellulose degradation	40	2 of 5
66794	arachidonate biosynthesis	40	2 of 5
66794	flavin biosynthesis	40	6 of 15
66794	vitamin K metabolism	40	2 of 5
66794	lipid metabolism	38.71	12 of 31
66794	citric acid cycle	35.71	5 of 14
66794	glycolate and glyoxylate degradation	33.33	2 of 6
66794	chorismate metabolism	33.33	3 of 9
66794	acetyl CoA biosynthesis	33.33	1 of 3
66794	enterobactin biosynthesis	33.33	1 of 3
66794	IAA biosynthesis	33.33	1 of 3
66794	lipid A biosynthesis	33.33	3 of 9
66794	sphingosine metabolism	33.33	2 of 6
66794	octane oxidation	33.33	1 of 3
66794	leucine metabolism	30.77	4 of 13
66794	urea cycle	30.77	4 of 13
66794	phenylpropanoid biosynthesis	30.77	4 of 13
66794	propionate fermentation	30	3 of 10
66794	arginine metabolism	29.17	7 of 24
66794	vitamin B6 metabolism	27.27	3 of 11
66794	polyamine pathway	26.09	6 of 23
66794	lactate fermentation	25	1 of 4
66794	carnitine metabolism	25	2 of 8
66794	toluene degradation	25	1 of 4
66794	phenol degradation	25	5 of 20
66794	CMP-KDO biosynthesis	25	1 of 4
66794	vitamin B12 metabolism	23.53	8 of 34
66794	sulfate reduction	23.08	3 of 13
66794	nitrate assimilation	22.22	2 of 9
66794	4-hydroxymandelate degradation	22.22	2 of 9
66794	tyrosine metabolism	21.43	3 of 14

API rID32STR

@ref	ADH (Arg)	beta GLU	beta GAR	beta GUR	alpha GAL	PAL	RIB	MAN	SOR	LAC	TRE	RAF	SAC	LARA	DARL	Acid from alpha-cyclodextrinCDEX	Acetoin production (Voges Proskauer test)VP	Alanyl-Phenylalanyl-Proline arylamidaseAPPA	beta GAL	Pyrrolidonyl arylamidasePyrA	N-Acetyl-glucosaminidasebeta NAG	Glycyl-tryptophan arylamidaseGTA	HIP	GLYG	PUL	MAL	MEL	MLZ	Acidification of methyl beta-D-glucopyranosideMbeta DG	TAG	beta MAN	URE
52821	-	+	-	-	-	-	+	+	-	-	+	-	-	-	-	-	+	-	+	+	-	-	+	-	-	-	-	+	+	+	-	-

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body-Site	#Organ	#Liver
#Infection	#Patient	-

Isolation

@ref	Sample type	Host species	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent
52821	Human liver lobe	Homo sapiens	1996-03-15	Borås	Sweden	SWE	Europe

Interaction and safety

Sequence information

Genome-based predictions

Literature

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#52821	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 35564
#66794	Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )
#68381	Automatically annotated from API rID32STR .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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