Lactobacillus rhamnosus DSM 20021 is an anaerobe, Gram-positive, rod-shaped bacterium of the family Lactobacillaceae.
Gram-positive rod-shaped anaerobe genome sequence 16S sequence Bacteria| @ref 20215 |
|
|
| Domain Bacteria |
| Phylum Bacillota |
| Class Bacilli |
| Order Lactobacillales |
| Family Lactobacillaceae |
| Genus Lactobacillus |
| Species Lactobacillus rhamnosus |
| Full scientific name Lactobacillus rhamnosus (Hansen 1968) Collins et al. 1989 |
| Synonyms (2) |
| @ref | Name | Growth | Medium link | Composition | |
|---|---|---|---|---|---|
| 8433 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | Medium recipe at MediaDive | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base | ||
| 8433 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | Medium recipe at MediaDive | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water | ||
| 8433 | MRS MEDIUM (DSMZ Medium 11) | Medium recipe at MediaDive | Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water | ||
| 41838 | MEDIUM 40- for Lactobacillus and Leuconostoc | Distilled water make up to (1000.000 ml);Man Rogosa Sharp agar (68.000 g) | |||
| 122183 | CIP Medium 40 | Medium recipe at CIP | |||
| 122183 | CIP Medium 41 | Medium recipe at CIP |
| @ref | Spore formation | Confidence | |
|---|---|---|---|
| 125439 | 96.919 |
| @ref | Murein short key | Type | |
|---|---|---|---|
| 8433 | A11.31 | A4alpha L-Lys-D-Asp |
| 67770 | ObservationAssay of Folic acid, riboflavin, panthothenic, nicotinic and glutamic acids, pyridoxal and arginine, azothiopurine and 6-mercaptopurine |
| @ref | Chebi-ID | Metabolite | Utilization activity | Kind of utilization tested | |
|---|---|---|---|---|---|
| 68381 | 40585 ChEBI | alpha-cyclodextrin | - | builds acid from | from API rID32STR |
| 68371 | 27613 ChEBI | amygdalin | + | builds acid from | from API 50CH acid |
| 68371 | 18305 ChEBI | arbutin | + | builds acid from | from API 50CH acid |
| 68381 | 29016 ChEBI | arginine | - | hydrolysis | from API rID32STR |
| 68374 | 29016 ChEBI | arginine | - | hydrolysis | from API ID32E |
| 68374 | 17057 ChEBI | cellobiose | - | builds acid from | from API ID32E |
| 68371 | 17057 ChEBI | cellobiose | + | builds acid from | from API 50CH acid |
| 68371 | 17108 ChEBI | D-arabinose | - | builds acid from | from API 50CH acid |
| 68374 | 18333 ChEBI | D-arabitol | - | builds acid from | from API ID32E |
| 68371 | 18333 ChEBI | D-arabitol | - | builds acid from | from API 50CH acid |
| 68381 | 18333 ChEBI | D-arabitol | - | builds acid from | from API rID32STR |
| 68371 | 15824 ChEBI | D-fructose | + | builds acid from | from API 50CH acid |
| 68371 | 28847 ChEBI | D-fucose | - | builds acid from | from API 50CH acid |
| 68374 | 18024 ChEBI | D-galacturonic acid | - | builds acid from | from API ID32E |
| 68374 | 17634 ChEBI | D-glucose | - | builds acid from | from API ID32E |
| 68371 | 17634 ChEBI | D-glucose | + | builds acid from | from API 50CH acid |
| 68371 | 62318 ChEBI | D-lyxose | - | builds acid from | from API 50CH acid |
| 68379 | 16899 ChEBI | D-mannitol | + | fermentation | from API Coryne |
| 68374 | 16899 ChEBI | D-mannitol | - | builds acid from | from API ID32E |
| 68371 | 16899 ChEBI | D-mannitol | + | builds acid from | from API 50CH acid |
| 68381 | 16899 ChEBI | D-mannitol | + | builds acid from | from API rID32STR |
| 68371 | 16024 ChEBI | D-mannose | + | builds acid from | from API 50CH acid |
| 68379 | 16988 ChEBI | D-ribose | + | fermentation | from API Coryne |
| 68371 | 16988 ChEBI | D-ribose | + | builds acid from | from API 50CH acid |
| 68381 | 16988 ChEBI | D-ribose | + | builds acid from | from API rID32STR |
| 68371 | 17924 ChEBI | D-sorbitol | + | builds acid from | from API 50CH acid |
| 68371 | 16443 ChEBI | D-tagatose | + | builds acid from | from API 50CH acid |
| 68379 | 65327 ChEBI | D-xylose | - | fermentation | from API Coryne |
| 68371 | 65327 ChEBI | D-xylose | - | builds acid from | from API 50CH acid |
| 68371 | 17113 ChEBI | erythritol | - | builds acid from | from API 50CH acid |
| 68379 | 4853 ChEBI | esculin | + | hydrolysis | from API Coryne |
| 68371 | 4853 ChEBI | esculin | + | builds acid from | from API 50CH acid |
| 68371 | 16813 ChEBI | galactitol | - | builds acid from | from API 50CH acid |
| 68379 | 5291 ChEBI | gelatin | - | hydrolysis | from API Coryne |
| 68371 | 17754 ChEBI | glycerol | - | builds acid from | from API 50CH acid |
| 68379 | 28087 ChEBI | glycogen | - | fermentation | from API Coryne |
| 68381 | 28087 ChEBI | glycogen | - | builds acid from | from API rID32STR |
| 68371 | 28087 ChEBI | glycogen | - | builds acid from | from API 50CH acid |
| 68381 | 606565 ChEBI | hippurate | + | hydrolysis | from API rID32STR |
| 68371 | 15443 ChEBI | inulin | - | builds acid from | from API 50CH acid |
| 68381 | 30849 ChEBI | L-arabinose | - | builds acid from | from API rID32STR |
| 68374 | 30849 ChEBI | L-arabinose | - | builds acid from | from API ID32E |
| 68371 | 30849 ChEBI | L-arabinose | - | builds acid from | from API 50CH acid |
| 68374 | 18403 ChEBI | L-arabitol | - | builds acid from | from API ID32E |
| 68371 | 18403 ChEBI | L-arabitol | - | builds acid from | from API 50CH acid |
| 68371 | 18287 ChEBI | L-fucose | - | builds acid from | from API 50CH acid |
| 68371 | 62345 ChEBI | L-rhamnose | + | builds acid from | from API 50CH acid |
| 68374 | 62345 ChEBI | L-rhamnose | - | builds acid from | from API ID32E |
| 68371 | 17266 ChEBI | L-sorbose | + | builds acid from | from API 50CH acid |
| 68371 | 65328 ChEBI | L-xylose | - | builds acid from | from API 50CH acid |
| 68379 | 17716 ChEBI | lactose | + | fermentation | from API Coryne |
| 68381 | 17716 ChEBI | lactose | - | builds acid from | from API rID32STR |
| 68371 | 17716 ChEBI | lactose | + | builds acid from | from API 50CH acid |
| 68374 | 25094 ChEBI | lysine | - | degradation | from API ID32E |
| 68374 | 15792 ChEBI | malonate | - | assimilation | from API ID32E |
| 68379 | 17306 ChEBI | maltose | + | fermentation | from API Coryne |
| 68381 | 17306 ChEBI | maltose | - | builds acid from | from API rID32STR |
| 68374 | 17306 ChEBI | maltose | - | builds acid from | from API ID32E |
| 68371 | 6731 ChEBI | melezitose | + | builds acid from | from API 50CH acid |
| 68381 | 6731 ChEBI | melezitose | + | builds acid from | from API rID32STR |
| 68381 | 28053 ChEBI | melibiose | - | builds acid from | from API rID32STR |
| 68371 | 28053 ChEBI | melibiose | - | builds acid from | from API 50CH acid |
| 68371 | 320061 ChEBI | methyl alpha-D-glucopyranoside | + | builds acid from | from API 50CH acid |
| 68371 | 43943 ChEBI | methyl alpha-D-mannoside | - | builds acid from | from API 50CH acid |
| 68381 | 320055 ChEBI | methyl beta-D-glucopyranoside | - | builds acid from | from API rID32STR |
| 68371 | 74863 ChEBI | methyl beta-D-xylopyranoside | - | builds acid from | from API 50CH acid |
| 68374 | 17268 ChEBI | myo-inositol | - | builds acid from | from API ID32E |
| 68371 | 17268 ChEBI | myo-inositol | - | builds acid from | from API 50CH acid |
| 68371 | 59640 ChEBI | N-acetylglucosamine | + | builds acid from | from API 50CH acid |
| 68379 | 17632 ChEBI | nitrate | - | reduction | from API Coryne |
| 122183 | 17632 ChEBI | nitrate | - | reduction | |
| 122183 | 17632 ChEBI | nitrate | + | respiration | |
| 122183 | 16301 ChEBI | nitrite | - | reduction | |
| 68374 | 18257 ChEBI | ornithine | - | degradation | from API ID32E |
| 68374 | 18394 ChEBI | palatinose | - | builds acid from | from API ID32E |
| 68371 | 0 ChEBI | Potassium 2-ketogluconate | - | builds acid from | from API 50CH acid |
| 68374 | 0 ChEBI | Potassium 5-ketogluconate | - | builds acid from | from API ID32E |
| 68371 | 0 ChEBI | Potassium 5-ketogluconate | - | builds acid from | from API 50CH acid |
| 68381 | 27941 ChEBI | pullulan | - | builds acid from | from API rID32STR |
| 68381 | 16634 ChEBI | raffinose | - | builds acid from | from API rID32STR |
| 68371 | 16634 ChEBI | raffinose | - | builds acid from | from API 50CH acid |
| 68374 | 15963 ChEBI | ribitol | - | builds acid from | from API ID32E |
| 68371 | 15963 ChEBI | ribitol | - | builds acid from | from API 50CH acid |
| 68371 | 17814 ChEBI | salicin | + | builds acid from | from API 50CH acid |
| 68381 | 30911 ChEBI | sorbitol | - | builds acid from | from API rID32STR |
| 68374 | 30911 ChEBI | sorbitol | - | builds acid from | from API ID32E |
| 68371 | 28017 ChEBI | starch | - | builds acid from | from API 50CH acid |
| 68379 | 17992 ChEBI | sucrose | + | fermentation | from API Coryne |
| 68374 | 17992 ChEBI | sucrose | - | builds acid from | from API ID32E |
| 68381 | 17992 ChEBI | sucrose | + | builds acid from | from API rID32STR |
| 68381 | 27082 ChEBI | trehalose | + | builds acid from | from API rID32STR |
| 68371 | 27082 ChEBI | trehalose | + | builds acid from | from API 50CH acid |
| 68374 | 27082 ChEBI | trehalose | - | builds acid from | from API ID32E |
| 68374 | 27897 ChEBI | tryptophan | - | energy source | from API ID32E |
| 68371 | 32528 ChEBI | turanose | + | builds acid from | from API 50CH acid |
| 68379 | 16199 ChEBI | urea | - | hydrolysis | from API Coryne |
| 68374 | 16199 ChEBI | urea | - | hydrolysis | from API ID32E |
| 68381 | 16199 ChEBI | urea | - | hydrolysis | from API rID32STR |
| 68371 | 17151 ChEBI | xylitol | - | builds acid from | from API 50CH acid |
| @ref | Value | Activity | Ec | |
|---|---|---|---|---|
| 68382 | acid phosphatase | + | 3.1.3.2 | from API zym |
| 122183 | alcohol dehydrogenase | - | 1.1.1.1 | |
| 68381 | alkaline phosphatase | - | 3.1.3.1 | from API rID32STR |
| 68382 | alkaline phosphatase | + | 3.1.3.1 | from API zym |
| 68379 | alkaline phosphatase | + | 3.1.3.1 | from API Coryne |
| 68382 | alpha-chymotrypsin | + | 3.4.21.1 | from API zym |
| 68382 | alpha-fucosidase | + | 3.2.1.51 | from API zym |
| 68382 | alpha-galactosidase | - | 3.2.1.22 | from API zym |
| 68381 | alpha-galactosidase | - | 3.2.1.22 | from API rID32STR |
| 68374 | alpha-galactosidase | - | 3.2.1.22 | from API ID32E |
| 68379 | alpha-glucosidase | + | 3.2.1.20 | from API Coryne |
| 68382 | alpha-glucosidase | + | 3.2.1.20 | from API zym |
| 68374 | alpha-glucosidase | - | 3.2.1.20 | from API ID32E |
| 68374 | alpha-maltosidase | - | from API ID32E | |
| 68382 | alpha-mannosidase | - | 3.2.1.24 | from API zym |
| 68381 | arginine dihydrolase | - | 3.5.3.6 | from API rID32STR |
| 68374 | arginine dihydrolase | - | 3.5.3.6 | from API ID32E |
| 68381 | beta-galactosidase | + | 3.2.1.23 | from API rID32STR |
| 68382 | beta-galactosidase | + | 3.2.1.23 | from API zym |
| 68374 | beta-galactosidase | + | 3.2.1.23 | from API ID32E |
| 68379 | beta-galactosidase | + | 3.2.1.23 | from API Coryne |
| 68381 | beta-glucosidase | + | 3.2.1.21 | from API rID32STR |
| 68382 | beta-glucosidase | + | 3.2.1.21 | from API zym |
| 68374 | beta-glucosidase | + | 3.2.1.21 | from API ID32E |
| 68379 | beta-glucosidase | + | 3.2.1.21 | from API Coryne |
| 68381 | beta-glucuronidase | - | 3.2.1.31 | from API rID32STR |
| 68382 | beta-glucuronidase | - | 3.2.1.31 | from API zym |
| 68374 | beta-glucuronidase | - | 3.2.1.31 | from API ID32E |
| 68379 | beta-glucuronidase | - | 3.2.1.31 | from API Coryne |
| 68381 | beta-mannosidase | - | 3.2.1.25 | from API rID32STR |
| 122183 | catalase | - | 1.11.1.6 | |
| 68379 | catalase | - | 1.11.1.6 | from API Coryne |
| 68382 | cystine arylamidase | + | 3.4.11.3 | from API zym |
| 68382 | esterase (C 4) | + | from API zym | |
| 68382 | esterase lipase (C 8) | + | from API zym | |
| 68379 | gelatinase | - | from API Coryne | |
| 68381 | glycyl tryptophan arylamidase | - | from API rID32STR | |
| 68374 | L-aspartate arylamidase | - | 3.4.11.21 | from API ID32E |
| 68382 | leucine arylamidase | + | 3.4.11.1 | from API zym |
| 68374 | lipase | + | from API ID32E | |
| 68382 | lipase (C 14) | - | from API zym | |
| 122183 | lysine decarboxylase | - | 4.1.1.18 | |
| 68374 | lysine decarboxylase | - | 4.1.1.18 | from API ID32E |
| 68382 | N-acetyl-beta-glucosaminidase | + | 3.2.1.52 | from API zym |
| 68374 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API ID32E |
| 68379 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 | from API Coryne |
| 68382 | naphthol-AS-BI-phosphohydrolase | + | from API zym | |
| 122183 | ornithine decarboxylase | - | 4.1.1.17 | |
| 68374 | ornithine decarboxylase | - | 4.1.1.17 | from API ID32E |
| 122183 | oxidase | - | ||
| 68379 | pyrazinamidase | - | 3.5.1.B15 | from API Coryne |
| 68381 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API rID32STR |
| 68379 | pyrrolidonyl arylamidase | + | 3.4.19.3 | from API Coryne |
| 68382 | trypsin | - | 3.4.21.4 | from API zym |
| 68381 | urease | - | 3.5.1.5 | from API rID32STR |
| 68374 | urease | - | 3.5.1.5 | from API ID32E |
| 68379 | urease | - | 3.5.1.5 | from API Coryne |
| 68382 | valine arylamidase | + | from API zym |
| @ref | pathway | enzyme coverage | annotated reactions | external links | |
|---|---|---|---|---|---|
| 66794 | gluconeogenesis | 100 | 8 of 8 | ||
| 66794 | C4 and CAM-carbon fixation | 100 | 8 of 8 | ||
| 66794 | acetate fermentation | 100 | 4 of 4 | ||
| 66794 | ribulose monophosphate pathway | 100 | 2 of 2 | ||
| 66794 | ppGpp biosynthesis | 100 | 4 of 4 | ||
| 66794 | coenzyme A metabolism | 100 | 4 of 4 | ||
| 66794 | CDP-diacylglycerol biosynthesis | 100 | 2 of 2 | ||
| 66794 | UDP-GlcNAc biosynthesis | 100 | 3 of 3 | ||
| 66794 | cis-vaccenate biosynthesis | 100 | 2 of 2 | ||
| 66794 | ceramide biosynthesis | 100 | 1 of 1 | ||
| 66794 | folate polyglutamylation | 100 | 1 of 1 | ||
| 66794 | anapleurotic synthesis of oxalacetate | 100 | 1 of 1 | ||
| 66794 | methylglyoxal degradation | 100 | 5 of 5 | ||
| 66794 | acetoin degradation | 100 | 3 of 3 | ||
| 66794 | palmitate biosynthesis | 90.91 | 20 of 22 | ||
| 66794 | pentose phosphate pathway | 90.91 | 10 of 11 | ||
| 66794 | aspartate and asparagine metabolism | 88.89 | 8 of 9 | ||
| 66794 | peptidoglycan biosynthesis | 86.67 | 13 of 15 | ||
| 66794 | vitamin B1 metabolism | 84.62 | 11 of 13 | ||
| 66794 | degradation of sugar alcohols | 81.25 | 13 of 16 | ||
| 66794 | starch degradation | 80 | 8 of 10 | ||
| 66794 | glycogen metabolism | 80 | 4 of 5 | ||
| 66794 | threonine metabolism | 80 | 8 of 10 | ||
| 66794 | pyrimidine metabolism | 75.56 | 34 of 45 | ||
| 66794 | purine metabolism | 75.53 | 71 of 94 | ||
| 66794 | glycogen biosynthesis | 75 | 3 of 4 | ||
| 66794 | NAD metabolism | 72.22 | 13 of 18 | ||
| 66794 | propanol degradation | 71.43 | 5 of 7 | ||
| 66794 | cardiolipin biosynthesis | 71.43 | 5 of 7 | ||
| 66794 | photosynthesis | 71.43 | 10 of 14 | ||
| 66794 | glycolysis | 70.59 | 12 of 17 | ||
| 66794 | myo-inositol biosynthesis | 70 | 7 of 10 | ||
| 66794 | phenylalanine metabolism | 69.23 | 9 of 13 | ||
| 66794 | methionine metabolism | 69.23 | 18 of 26 | ||
| 66794 | glutamate and glutamine metabolism | 67.86 | 19 of 28 | ||
| 66794 | cyanate degradation | 66.67 | 2 of 3 | ||
| 66794 | formaldehyde oxidation | 66.67 | 2 of 3 | ||
| 66794 | valine metabolism | 66.67 | 6 of 9 | ||
| 66794 | degradation of hexoses | 66.67 | 12 of 18 | ||
| 66794 | L-lactaldehyde degradation | 66.67 | 2 of 3 | ||
| 66794 | d-xylose degradation | 63.64 | 7 of 11 | ||
| 66794 | ketogluconate metabolism | 62.5 | 5 of 8 | ||
| 66794 | dTDPLrhamnose biosynthesis | 62.5 | 5 of 8 | ||
| 66794 | glycine betaine biosynthesis | 60 | 3 of 5 | ||
| 66794 | 3-chlorocatechol degradation | 60 | 3 of 5 | ||
| 66794 | lipoate biosynthesis | 60 | 3 of 5 | ||
| 66794 | factor 420 biosynthesis | 60 | 3 of 5 | ||
| 66794 | Entner Doudoroff pathway | 60 | 6 of 10 | ||
| 66794 | oxidative phosphorylation | 59.34 | 54 of 91 | ||
| 66794 | non-pathway related | 57.89 | 22 of 38 | ||
| 66794 | degradation of pentoses | 57.14 | 16 of 28 | ||
| 66794 | ubiquinone biosynthesis | 57.14 | 4 of 7 | ||
| 66794 | CO2 fixation in Crenarchaeota | 55.56 | 5 of 9 | ||
| 66794 | serine metabolism | 55.56 | 5 of 9 | ||
| 66794 | d-mannose degradation | 55.56 | 5 of 9 | ||
| 66794 | metabolism of disaccharids | 54.55 | 6 of 11 | ||
| 66794 | proline metabolism | 54.55 | 6 of 11 | ||
| 66794 | degradation of sugar acids | 52 | 13 of 25 | ||
| 66794 | alanine metabolism | 51.72 | 15 of 29 | ||
| 66794 | histidine metabolism | 51.72 | 15 of 29 | ||
| 66794 | cyclohexanol degradation | 50 | 2 of 4 | ||
| 66794 | sulfopterin metabolism | 50 | 2 of 4 | ||
| 66794 | 6-hydroxymethyl-dihydropterin diphosphate biosynthesis | 50 | 4 of 8 | ||
| 66794 | tryptophan metabolism | 50 | 19 of 38 | ||
| 66794 | selenocysteine biosynthesis | 50 | 3 of 6 | ||
| 66794 | butanoate fermentation | 50 | 2 of 4 | ||
| 66794 | adipate degradation | 50 | 1 of 2 | ||
| 66794 | isoleucine metabolism | 50 | 4 of 8 | ||
| 66794 | ethanol fermentation | 50 | 1 of 2 | ||
| 66794 | tetrahydrofolate metabolism | 50 | 7 of 14 | ||
| 66794 | suberin monomers biosynthesis | 50 | 1 of 2 | ||
| 66794 | glutathione metabolism | 50 | 7 of 14 | ||
| 66794 | cysteine metabolism | 50 | 9 of 18 | ||
| 66794 | reductive acetyl coenzyme A pathway | 42.86 | 3 of 7 | ||
| 66794 | mevalonate metabolism | 42.86 | 3 of 7 | ||
| 66794 | isoprenoid biosynthesis | 42.31 | 11 of 26 | ||
| 66794 | degradation of aromatic, nitrogen containing compounds | 41.67 | 5 of 12 | ||
| 66794 | ascorbate metabolism | 40.91 | 9 of 22 | ||
| 66794 | lysine metabolism | 40.48 | 17 of 42 | ||
| 66794 | ethylmalonyl-CoA pathway | 40 | 2 of 5 | ||
| 66794 | metabolism of amino sugars and derivatives | 40 | 2 of 5 | ||
| 66794 | glycine metabolism | 40 | 4 of 10 | ||
| 66794 | cellulose degradation | 40 | 2 of 5 | ||
| 66794 | arachidonate biosynthesis | 40 | 2 of 5 | ||
| 66794 | flavin biosynthesis | 40 | 6 of 15 | ||
| 66794 | vitamin K metabolism | 40 | 2 of 5 | ||
| 66794 | lipid metabolism | 38.71 | 12 of 31 | ||
| 66794 | citric acid cycle | 35.71 | 5 of 14 | ||
| 66794 | glycolate and glyoxylate degradation | 33.33 | 2 of 6 | ||
| 66794 | chorismate metabolism | 33.33 | 3 of 9 | ||
| 66794 | acetyl CoA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | enterobactin biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | IAA biosynthesis | 33.33 | 1 of 3 | ||
| 66794 | lipid A biosynthesis | 33.33 | 3 of 9 | ||
| 66794 | sphingosine metabolism | 33.33 | 2 of 6 | ||
| 66794 | octane oxidation | 33.33 | 1 of 3 | ||
| 66794 | leucine metabolism | 30.77 | 4 of 13 | ||
| 66794 | urea cycle | 30.77 | 4 of 13 | ||
| 66794 | phenylpropanoid biosynthesis | 30.77 | 4 of 13 | ||
| 66794 | propionate fermentation | 30 | 3 of 10 | ||
| 66794 | arginine metabolism | 29.17 | 7 of 24 | ||
| 66794 | vitamin B6 metabolism | 27.27 | 3 of 11 | ||
| 66794 | polyamine pathway | 26.09 | 6 of 23 | ||
| 66794 | lactate fermentation | 25 | 1 of 4 | ||
| 66794 | carnitine metabolism | 25 | 2 of 8 | ||
| 66794 | toluene degradation | 25 | 1 of 4 | ||
| 66794 | phenol degradation | 25 | 5 of 20 | ||
| 66794 | CMP-KDO biosynthesis | 25 | 1 of 4 | ||
| 66794 | vitamin B12 metabolism | 23.53 | 8 of 34 | ||
| 66794 | sulfate reduction | 23.08 | 3 of 13 | ||
| 66794 | nitrate assimilation | 22.22 | 2 of 9 | ||
| 66794 | 4-hydroxymandelate degradation | 22.22 | 2 of 9 | ||
| 66794 | tyrosine metabolism | 21.43 | 3 of 14 |
| @ref | ControlQ | GLY | ERY | DARA | LARA | RIB | DXYL | LXYL | ADO | MDX | GAL | GLU | FRU | MNE | SBE | RHA | DUL | INO | MAN | SOR | MDM | MDG | NAG | AMY | ARB | ESC | SAL | CEL | MAL | LAC | MEL | SAC | TRE | INU | MLZ | RAF | AMD | GLYG | XLT | GEN | TUR | LYX | TAG | DFUC | LFUC | DARL | LARL | GNT | 2KG | 5KG | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8433 | - | - | - | - | - | + | - | - | - | - | - | + | + | + | + | + | - | - | + | + | - | + | + | + | + | + | + | + | - | + | - | - | + | - | + | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | |
| 8433 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | + | + | - | - | + | + | - | + | + | + | + | + | + | + | +/- | + | - | - | + | - | + | - | - | - | - | - | + | - | + | - | - | - | - | - | - | - | |
| 8433 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | + | + | - | - | + | + | - | + | + | + | + | + | + | + | + | + | - | - | + | - | + | - | - | - | - | + | + | - | + | - | - | - | - | - | - | - | |
| 8433 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | + | + | - | - | + | + | - | + | + | + | + | + | + | + | + | + | - | + | + | - | + | - | - | - | - | - | + | - | + | - | - | - | - | +/- | - | - | |
| 8433 | - | - | - | - | - | + | - | - | - | - | + | + | + | + | + | + | - | - | + | + | - | + | + | + | + | + | + | + | + | + | - | - | + | - | + | - | - | - | - | + | + | - | + | - | - | - | - | +/- | - | - |
| @ref | ODC | ADH (Arg) | LDC (Lys) | URE | LARL | GAT | 5KG | LipaseLIP | Phenol red (Acidification)RP | beta GLU | MAN | MAL | ADO | PLE | beta GUR | MNT | IND | N-Acetyl-beta-Glucosaminidasebeta NAG | beta GAL | GLU | SAC | LARA | DARL | alpha GLU | alpha GAL | TRE | RHA | INO | CEL | SOR | alpha-MaltosidasealphaMAL | L-aspartic acid arylamidaseAspA | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 47413 | - | - | - | - | - | - | - | + | + | + | - | - | - | - | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | - | - | - |
| @ref | ADH (Arg) | beta GLU | beta GAR | beta GUR | alpha GAL | PAL | RIB | MAN | SOR | LAC | TRE | RAF | SAC | LARA | DARL | Acid from alpha-cyclodextrinCDEX | Acetoin production (Voges Proskauer test)VP | Alanyl-Phenylalanyl-Proline arylamidaseAPPA | beta GAL | Pyrrolidonyl arylamidasePyrA | N-Acetyl-glucosaminidasebeta NAG | Glycyl-tryptophan arylamidaseGTA | HIP | GLYG | PUL | MAL | MEL | MLZ | Acidification of methyl beta-D-glucopyranosideMbeta DG | TAG | beta MAN | URE | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8433 | - | + | - | - | - | - | + | + | - | - | + | - | + | - | - | - | + | +/- | + | + | + | - | + | - | - | - | - | + | - | + | - | - | |
| 8433 | - | + | - | - | - | - | + | + | - | - | + | - | + | - | - | - | + | - | + | + | - | - | + | - | - | - | - | + | - | - | - | - |
Global distribution of 16S sequence LC145553 (>99% sequence identity) for Lactobacillaceae from Microbeatlas ![]()
| @ref | Description | Assembly level | INSDC accession | BV-BRC accession | IMG accession | NCBI tax ID | Score | |
|---|---|---|---|---|---|---|---|---|
| 67770 | ASM143540v1 assembly for Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425 | scaffold | 1423797 | 64.33 | ||||
| 67770 | ASM284951v1 assembly for Lacticaseibacillus rhamnosus NRRL B-442 | contig | 47715 | 56.66 | ||||
| 66792 | ASM799085v1 assembly for Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425 | contig | 1423797 | 40.72 | ||||
| 66792 | ASM61524v1 assembly for Lacticaseibacillus rhamnosus DSM 20021 = JCM 1136 = NBRC 3425 | contig | 1423797 | 33.03 | ||||
| 124043 | ASM335282v1 assembly for Lacticaseibacillus rhamnosus NRRL B-442 | scaffold | 47715 | 0 |
| @ref | Description | Accession | Length | Database | NCBI tax ID | |
|---|---|---|---|---|---|---|
| 20218 | Lacticaseibacillus rhamnosus gene for 16S rRNA, partial sequence, strain: YIT 0105 (= ATCC 7469) | AB008211 | 1540 | 47715 | ||
| 20218 | Lactobacillus rhamnosus ATCC 7469a 16S ribosomal RNA gene, partial sequence | AF429476 | 507 | 47715 | ||
| 20218 | Lactobacillus rhamnosus ATCC 7469 16S ribosomal RNA gene, partial sequence | AF429485 | 507 | 47715 | ||
| 20218 | Lactobacillus rhamnosus strain ATCC 7469a 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | AF429563 | 537 | 47715 | ||
| 20218 | Lactobacillus rhamnosus strain ATCC 7469 16S ribosomal RNA gene, partial sequence; 16S-23S intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | AF429572 | 537 | 47715 | ||
| 20218 | Lactobacillus rhamnosus strain ATCC 7469 16S ribosomal RNA gene, partial sequence | JQ580982 | 969 | 47715 | ||
| 20218 | Lactobacillus rhamnosus 16S-23S rDNA intergenic spacer region | AF121201 | 218 | 47715 | ||
| 20218 | Lactobacillus rhamnosus strain DSM 20021 16S ribosomal RNA gene, partial sequence | HQ012008 | 936 | 47715 | ||
| 20218 | Lacticaseibacillus rhamnosus strain DSM 20021 16S ribosomal RNA (16S rRNA) gene, complete sequence | M58815 | 1514 | 1582 | ||
| 20218 | Lactobacillus rhamnosus genes for 16S rRNA, 16S-23S internal transcribed spacer, tRNA-Ile, tRNA-Ala, 23S rRNA, partial and complete sequence, strain:JCM 1136 | AB237512 | 578 | 47715 | ||
| 20218 | Lactobacillus rhamnosus genes for 16S rRNA, 16S-23S internal transcribed spacer, 23S rRNA, partial sequence, strain:JCM 1136 | AB237513 | 365 | 47715 | ||
| 20218 | Lactobacillus rhamnosus gene for 16S rRNA, partial sequence, strain: JCM 1136 | AB289276 | 616 | 47715 | ||
| 20218 | Lactobacillus rhamnosus 16S ribosomal RNA, partial sequence; 16S/23S intergenic spacer region, complete sequence; and 23S ribosomal RNA partial sequence | AF182730 | 686 | 47715 | ||
| 20218 | Lactobacillus rhamnosus gene for 16S rRNA | D16552 | 1521 | 47715 | ||
| 20218 | Lactobacillus rhamnosus gene for 16S rRNA, partial sequence, strain: NBRC 3425 | AB626049 | 1495 | 47715 | ||
| 67770 | Lactobacillus rhamnosus gene for 16S ribosomal RNA, partial sequence, strain: JCM 1136 | LC145553 | 1389 | 47715 | ||
| 124043 | Lacticaseibacillus rhamnosus strain JCM 1136 16S ribosomal RNA gene, partial sequence. | OQ626016 | 1082 | 47715 | ||
| 124043 | Lacticaseibacillus rhamnosus strain DSM 20021 16S ribosomal RNA gene, partial sequence. | OQ826435 | 374 | 47715 | ||
| 124043 | Lacticaseibacillus rhamnosus strain DSM 20021 16S ribosomal RNA gene, partial sequence. | OQ828706 | 469 | 47715 | ||
| 124043 | Lactobacillus rhamnosus strain JCM 1136 16S ribosomal RNA gene, partial sequence. | MN945386 | 1490 | 47715 | ||
| 124043 | Lactobacillus rhamnosus strain JCM 1136 16S ribosomal RNA gene, partial sequence. | MH329928 | 1024 | 47715 |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125439 | oxygen_tolerance | BacteriaNetⓘ | obligate aerobe | 97.19 | no |
| 125439 | gram_stain | BacteriaNetⓘ | positive | 78.85 | no |
| 125439 | motility | BacteriaNetⓘ | no | 73.40 | no |
| 125439 | spore_formation | BacteriaNetⓘ | no | 96.92 | no |
| @ref | Trait | Model | Prediction | Confidence in % | In training data |
|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positiveⓘ | yes | 92.51 | no |
| 125438 | anaerobic | anaerobicⓘ | no | 83.12 | no |
| 125438 | spore-forming | spore-formingⓘ | no | 79.35 | no |
| 125438 | aerobic | aerobicⓘ | no | 90.68 | yes |
| 125438 | thermophilic | thermophileⓘ | no | 94.98 | yes |
| 125438 | flagellated | motile2+ⓘ | no | 92.50 | no |
| Topic | Title | Authors | Journal | DOI | Year | |
|---|---|---|---|---|---|---|
| Assessment of Lactobacillus rhamnosus mediated protection against arsenic-induced toxicity in zebrafish: a qPCR-based analysis of Firmicutes and Bacteroidetes groups and embryonic development. | Jain A, Jain R, Jain SK. | Arch Microbiol | 10.1007/s00203-023-03647-0 | 2023 | ||
| An efficient Pulsed-Field Gel Electrophoresis (PFGE) method for typing autolytic Lacticaseibacillus rhamnosus strains. | Heikkinen J, von Wright A, Nikodinoska I, Moran CA. | MethodsX | 10.1016/j.mex.2022.101945 | 2022 | ||
| Phylogeny | The global population stru cture of Lacticaseibacillus rhamnosus and its application to an investigation of a rare case of infective endocarditis. | Santoiemma PP, Cohn SE, Gatesy SWM, Hauser AR, Agrawal S, Theodorou ME, Bachta KER, Ozer EA. | PLoS One | 10.1371/journal.pone.0300843 | 2024 | |
| Fluoride and gallein regulate polyphosphate accumulation in dental caries-associated Lacticaseibacillus. | Mandal S, Flood BE, Lunzer M, Kumar D, Bailey JV. | Microbiology (Reading) | 10.1099/mic.0.001519 | 2024 | ||
| Draft Genome Sequence of Lacticaseibacillus rhamnosus IMI 507023. | Nikodinoska I, Makkonen J, Blande D, Moran C. | Microbiol Resour Announc | 10.1128/mra.01217-21 | 2022 | ||
| Susceptibility of Lactobacillaceae Strains to Aminoglycoside Antibiotics in the Light of EFSA Guidelines. | Dec M, Herman-Ostrzyzek K, Zomer A, Urban-Chmiel R. | Life (Basel) | 10.3390/life15050732 | 2025 | ||
| Probiotic Adhesion to Skin Keratinocytes and Underlying Mechanisms. | Lizardo M, Magalhaes RM, Tavaria FK. | Biology (Basel) | 10.3390/biology11091372 | 2022 | ||
| Characterization of the anti-pathogenic, genomic and phenotypic properties of a Lacticaseibacillus rhamnosus VHProbi M14 isolate. | Zhang J, Li K, Bu X, Cheng S, Duan Z. | PLoS One | 10.1371/journal.pone.0285480 | 2023 | ||
| Mining for Active Molecules in Probiotic Supernatant by Combining Non-Targeted Metabolomics and Immunoregulation Testing. | Fonseca JR, Lucio M, Harir M, Schmitt-Kopplin P. | Metabolites | 10.3390/metabo12010035 | 2022 | ||
| Optimizing the fermentation parameters in the Lactic Acid Fermentation of Legume-based Beverages- a statistically based fermentation. | Ritter SW, Thiel QP, Gastl MI, Becker TM. | Microb Cell Fact | 10.1186/s12934-024-02522-x | 2024 | ||
| Innovative Fermented Beverages Made with Red Rice, Barley, and Buckwheat. | Cardinali F, Osimani A, Milanovic V, Garofalo C, Aquilanti L. | Foods | 10.3390/foods10030613 | 2021 | ||
| Genetics | Isolation, characterization and comparative genomics of potentially probiotic Lactiplantibacillus plantarum strains from Indian foods. | Surve S, Shinde DB, Kulkarni R. | Sci Rep | 10.1038/s41598-022-05850-3 | 2022 | |
| Exploring the Therapeutic Potentials of Exopolysaccharides Derived From Lactic Acid Bacteria and Bifidobacteria: Antioxidant, Antitumor, and Periodontal Regeneration. | Khalil MA, Sonbol FI, Al-Madboly LA, Aboshady TA, Alqurashi AS, Ali SS. | Front Microbiol | 10.3389/fmicb.2022.803688 | 2022 | ||
| Enzymology | The Effect of Enzymatic Treatment with Mutanase, Beta-Glucanase, and DNase on a Saliva-Derived Biofilm Model. | Dukanovic Rikvold P, Skov Hansen LB, Meyer RL, Jorgensen MR, Tiwari MK, Schlafer S. | Caries Res | 10.1159/000535980 | 2024 | |
| Rapid Acidification and Off-Flavor Reduction of Pea Protein by Fermentation with Lactic Acid Bacteria and Yeasts. | Zipori D, Hollmann J, Rigling M, Zhang Y, Weiss A, Schmidt H. | Foods | 10.3390/foods13040588 | 2024 | ||
| Molecular strategies for the utilisation of human milk oligosaccharides by infant gut-associated bacteria. | Kiely LJ, Busca K, Lane JA, van Sinderen D, Hickey RM. | FEMS Microbiol Rev | 10.1093/femsre/fuad056 | 2023 | ||
| Specificity of the AMP-6000 Method for Enumerating Clostridium Endospores in Milk. | Burtscher J, Rudavsky T, Zitz U, Domig KJ. | Foods | 10.3390/foods13081192 | 2024 | ||
| Phytocomplex Influences Antimicrobial and Health Properties of Concentrated Glycerine Macerates. | Di Vito M, Gentile M, Mattarelli P, Barbanti L, Micheli L, Mazzuca C, Garzoli S, Titubante M, Vitali A, Cacaci M, Sanguinetti M, Bugli F. | Antibiotics (Basel) | 10.3390/antibiotics9120858 | 2020 | ||
| Pathogenicity | Bacterial reduction in sealed caries lesions is strain- and material-specific. | Marggraf T, Ganas P, Paris S, Schwendicke F. | Sci Rep | 10.1038/s41598-018-21842-8 | 2018 | |
| Prebiotic potential of oligosaccharides extracted from improved Ugandan varieties of millet, sesame, soybean, and sorghum: enhancing probiotic growth and enteric pathogen inhibition. | Alowo D, Olum S, Mukisa IM, Ongeng D. | BMC Microbiol | 10.1186/s12866-025-04028-x | 2025 | ||
| Preparation of a Lactobacillus rhamnosus ATCC 7469 microencapsulated-lactulose synbiotic and its effect on equol production. | Wang X, Ma Y, Liu Y, Zhang J, Jiang W, Fang X, Wang L. | Food Funct | 10.1039/d4fo02690j | 2024 | ||
| Lacticaseibacillus rhamnosus inhibits the development of dental caries in rat caries model and in vitro. | Chen Y, Hao Y, Chen J, Han Q, Wang Z, Peng X, Cheng L. | J Dent | 10.1016/j.jdent.2024.105278 | 2024 | ||
| Woodfordia fruticosa fermented with lactic acid bacteria impact on foodborne pathogens adhesion and cytokine production in HT-29 cells. | Lee EB, Lee K. | Front Microbiol | 10.3389/fmicb.2024.1346909 | 2024 | ||
| Probiotic Lactobacillus Species Modulate Immune Responses During Vaginal Epithelial Cell Colonization. | Valentine M, Rosati D, Dietschmann A, Schille TB, Netea MG, Hube B, Gresnigt MS. | J Infect Dis | 10.1093/infdis/jiaf221 | 2025 | ||
| The Microalga Chlorella vulgaris Supplements as a Factor Increasing the Survival of Potentially Probiotic Lactic Acid Bacteria Under Environmental Stress Conditions. | Adamski P, Klebukowska L. | Environ Microbiol Rep | 10.1111/1758-2229.70226 | 2025 | ||
| Safety evaluation of Lacticaseibacillus rhamnosus KF7 based on complete genome, phenotypic assays and alternative models: Caenorhabditis elegans. | Cheng Y, Zhang Y, Pang X, You C. | Curr Res Food Sci | 10.1016/j.crfs.2025.101227 | 2025 | ||
| Heat-Killed Lactobacillus rhamnosus ATCC 7469 Improved UVB-Induced Photoaging Via Antiwrinkle and Antimelanogenesis Impacts. | Zhang X, Xu J, Ma M, Zhao Y, Song Y, Zheng B, Wen Z, Gong M, Meng L. | Photochem Photobiol | 10.1111/php.13775 | 2023 | ||
| Sodium Deoxycholate-Propidium Monoazide Droplet Digital PCR for Rapid and Quantitative Detection of Viable Lacticaseibacillus rhamnosus HN001 in Compound Probiotic Products. | Wang P, Liang L, Peng X, Qu T, Zhao X, Ji Q, Chen Y. | Microorganisms | 10.3390/microorganisms12081504 | 2024 | ||
| Tumor-targeted induction of intrinsic apoptosis in colon cancer cells by Lactobacillus plantarum and Lactobacillus rhamnosus strains. | Amin M, Navidifar T, Saeb S, Barzegari E, Jamalan M. | Mol Biol Rep | 10.1007/s11033-023-08445-x | 2023 | ||
| Immunomodulation in the intestinal mucosa of mice supplemented with Lactobacillus rhamnosus (ATCC 7469) and infected with Toxocara canis. | de Moura MQ, da Cunha CNO, de Sousa NFGC, Cruz LAX, Rheingantz MG, Walcher DL, Mattos GT, Martins LHR, de Avila LFDC, Berne MEA, Scaini CJ. | Immunobiology | 10.1016/j.imbio.2023.152359 | 2023 | ||
| L-Poly(lactic acid) Production by Microwave Irradiation of Lactic Acid Obtained from Lignocellulosic Wastes. | Senila L, Cadar O, Kovacs E, Gal E, Dan M, Stupar Z, Simedru D, Senila M, Roman C. | Int J Mol Sci | 10.3390/ijms24129817 | 2023 | ||
| Community living causes changes in metabolic behavior and is permitted by specific growth conditions in two bacterial co-culture systems. | Ellis E, Fulte S, Boylan S, Flory A, Paine K, Lopez S, Allen G, Warya K, Ortiz-Merino J, Blacketer S, Thompson S, Sanchez S, Burdette K, Duchscherer A, Pinkham N, Shih JD, Rahn-Lee L. | J Bacteriol | 10.1128/jb.00075-25 | 2025 | ||
| Nutraceutical Combinational Therapy for Diarrhoea Control with Probiotic Beverages from Fermented Fruits, Vegetables and Cereals to Regain Lost Hydration, Nutrition and Gut Microbiota. | Dahiya D, Nigam PS. | Microorganisms | 10.3390/microorganisms11092190 | 2023 | ||
| Frozen Fermented Dairy Snacks with Probiotics and Blueberry Bagasse: Stability, Bioactivity, and Digestive Viability. | Hurtado-Romero A, Zepeda-Hernandez A, Cardenas-Rangel J, Aguilar-Marquez R, Garcia-Amezquita LE, Carrillo-Nieves D, Garcia-Cayuela T. | Microorganisms | 10.3390/microorganisms13010086 | 2025 | ||
| Quantitative PCR Assays for the Strain-Specific Identification and Enumeration of Probiotic Strain Lacticaseibacillus rhamnosus X253. | Zhao L, Zhang D, Liu Y, Zhang YN, Meng DQ, Xu Q, Zhong J, Jiang QY, Zhao Y, Wang SJ. | Foods | 10.3390/foods11152282 | 2022 | ||
| Antibacterial and Antibiofilm Effects of Lactobacilli Strains against Clinical Isolates of Pseudomonas aeruginosa under Conditions Relevant to Cystic Fibrosis. | Batoni G, Catelli E, Kaya E, Pompilio A, Bianchi M, Ghelardi E, Di Bonaventura G, Esin S, Maisetta G. | Antibiotics (Basel) | 10.3390/antibiotics12071158 | 2023 | ||
| Metatranscriptomics for Understanding the Microbiome in Food and Nutrition Science. | Butowski CF, Dixit Y, Reis MM, Mu C. | Metabolites | 10.3390/metabo15030185 | 2025 | ||
| Effects of Microorganisms in Fish Aquaculture from a Sustainable Approach: A Review. | Amillano-Cisneros JM, Fuentes-Valencia MA, Leyva-Morales JB, Savin-Amador M, Marquez-Pacheco H, Bastidas-Bastidas PJ, Leyva-Camacho L, De la Torre-Espinosa ZY, Badilla-Medina CN. | Microorganisms | 10.3390/microorganisms13030485 | 2025 | ||
| Short-Term Intake of Theobroma grandiflorum Juice Fermented with Lacticaseibacillus rhamnosus ATCC 9595 Amended the Outcome of Endotoxemia Induced by Lipopolysaccharide. | Zagmignan A, Mendes YC, Mesquita GP, Santos GDCD, Silva LDS, de Souza Sales AC, Castelo Branco SJDS, Junior ARC, Bazan JMN, Alves ER, Almeida BL, Santos AKM, Firmo WDCA, Silva MRC, Cantanhede Filho AJ, Miranda RCM, Silva LCND. | Nutrients | 10.3390/nu15041059 | 2023 | ||
| Polyphosphate from Lactic Acid Bacteria: A Functional Molecule for Food and Health Applications. | Corrales D, Alcantara C, Monedero V, Zuniga M. | Foods | 10.3390/foods14132211 | 2025 | ||
| Lipid discovery enabled by sequence statistics and machine learning. | Christensen PM, Martin J, Uppuluri A, Joyce LR, Wei Y, Guan Z, Morcos F, Palmer KL. | Elife | 10.7554/elife.94929 | 2024 | ||
| Lacticaseibacillus rhamnosus CA15 (DSM 33960) as a Candidate Probiotic Strain for Human Health. | Pino A, Vaccalluzzo A, Caggia C, Balzaretti S, Vanella L, Sorrenti V, Ronkainen A, Satokari R, Randazzo CL. | Nutrients | 10.3390/nu14224902 | 2022 | ||
| Phenolic compound profile of probiotic (Lacticaseibacillus rhamnosus LR5) fortified vegetable tablet and probiotic survival in the simulated gastrointestinal tract. | Jafari S, Thongmat K, Kijpatanasilp I, Kerdsup P, Naknaen P, Taweechotipatr M, Assatarakul K. | Sci Rep | 10.1038/s41598-022-04874-z | 2022 | ||
| Postbiotics Production of Candidate-Probiotic Lactiplantibacillus plantarum AC131 with Renewable Bio Resources. | Danova S, Yankov D, Dobreva L, Dobreva A, Armenova N, Apostolov A, Mileva M. | Life (Basel) | 10.3390/life13102006 | 2023 | ||
| Layer-by-Layer Coating of Single-Cell Lacticaseibacillus rhamnosus to Increase Viability Under Simulated Gastrointestinal Conditions and Use in Film Formation. | Sbehat M, Altamimi M, Sabbah M, Mauriello G. | Front Microbiol | 10.3389/fmicb.2022.838416 | 2022 | ||
| Evaluation of Growth, Viability, Lactic Acid Production and Anti-Infective Effects of Lacticaseibacillus rhamnosus ATCC 9595 in Bacuri Juice (Platonia insignis). | Mendes YC, Mesquita GP, Costa GDE, Barbosa da Silva AC, Gouveia E, Silva MRC, Monteiro-Neto V, Miranda RCM, Nascimento da Silva LC, Zagmignan A. | Foods | 10.3390/foods10030603 | 2021 | ||
| Featured Prebiotic Agent: The Roles and Mechanisms of Direct and Indirect Prebiotic Activities of Lactoferrin and Its Application in Disease Control. | Liu ZS, Chen PW. | Nutrients | 10.3390/nu15122759 | 2023 | ||
| In Vivo Efficacy of Lacticaseibacillus rhamnosus L8020 in a Mouse Model of Oral Candidiasis. | Ito R, Mine Y, Yumisashi Y, Yoshioka R, Hamaoka M, Taji T, Murayama T, Nikawa H. | J Fungi (Basel) | 10.3390/jof7050322 | 2021 | ||
| An Untargeted Metabolomic Analysis of Lacticaseibacillus (L.) rhamnosus, Lactobacillus (L.) acidophilus, Lactiplantibacillus (L.) plantarum and Limosilactobacillus (L.) reuteri Reveals an Upregulated Production of Inosine from L. rhamnosus. | Spaggiari L, Pedretti N, Ricchi F, Pinetti D, Campisciano G, De Seta F, Comar M, Kenno S, Ardizzoni A, Pericolini E. | Microorganisms | 10.3390/microorganisms12040662 | 2024 | ||
| Emerging Nonthermal Technologies for the Production of Postbiotics. | Thirumdas R, Mudgil P. | Compr Rev Food Sci Food Saf | 10.1111/1541-4337.70335 | 2025 | ||
| Probiotic Lactobacillus rhamnosus species: considerations for female reproduction and offspring health. | Tas GG, Sati L. | J Assist Reprod Genet | 10.1007/s10815-024-03230-6 | 2024 | ||
| Lactic Acid Bacteria and Yeast Fermentation to Improve the Nutritional Value of Ulva rigida. | Brandao M, Marques DJ, Sousa S, Mateus M, Pinheiro HM, da Fonseca MMR, Pires C, Nunes ML, Marques A, Cesario MT. | Mar Drugs | 10.3390/md23030106 | 2025 | ||
| Targeting Melanogenesis with Postbiotics: An Integrated Zebrafish-Based Assessment of Lactobacillus salivarius BGHO-1 and Lactobacillus paracasei BGSJ2-8. | Katona G, Jovanovic Ljeskovic N, Strahinic I, Stanisavljevic N, Vojvodic S, Djuris J, Pavic A. | Molecules | 10.3390/molecules30204134 | 2025 | ||
| Beyond antibiotics: probiotics as a promising ally against Helicobacter pylori. | Yuan L, Yang C, Han Y, Yang F, Tu H. | Front Pharmacol | 10.3389/fphar.2025.1620870 | 2025 | ||
| Promising Antidepressant Potential: The Role of Lactobacillus rhamnosus GG in Mental Health and Stress Response. | Isik M, Kose F, Ozbayer C, Budak O, Kaya RK, Erdogan DG, Demirci MA, Doganay S, Bagci C. | Probiotics Antimicrob Proteins | 10.1007/s12602-025-10470-0 | 2025 | ||
| Probiotics: an alternative anti-parasite therapy. | Mandal S, Mondal C, Lyndem LM. | J Parasit Dis | 10.1007/s12639-024-01680-4 | 2024 | ||
| Prebiotic Oligosaccharides in Skin Health: Benefits, Mechanisms, and Cosmetic Applications. | Zeng M, Li Y, Cheng J, Wang J, Liu Q. | Antioxidants (Basel) | 10.3390/antiox14060754 | 2025 | ||
| Plant Extracts Rich in Polyphenols as Potent Modulators in the Growth of Probiotic and Pathogenic Intestinal Microorganisms. | Milutinovic M, Dimitrijevic-Brankovic S, Rajilic-Stojanovic M. | Front Nutr | 10.3389/fnut.2021.688843 | 2021 | ||
| Genetics | Lactiplantibacillus plantarum LOC1 Isolated from Fresh Tea Leaves Modulates Macrophage Response to TLR4 Activation. | Suzuki M, Albarracin L, Tsujikawa Y, Fukuyama K, Sakane I, Villena J, Kitazawa H. | Foods | 10.3390/foods11203257 | 2022 | |
| Probiotics: A multifaceted approach to health promotion-from disease prevention to food enrichment and delivery systems. | Vijayaram S, K E V, Kandasamy S, Razafindralambo H, Ringo E, Sun YZ, Kaliyannan G. | AIMS Microbiol | 10.3934/microbiol.2025026 | 2025 | ||
| Regulatory mechanisms and applications of Lactobacillus biofilms in the food industry. | Yao P, Mohd Esah E, Zhao C. | Front Microbiol | 10.3389/fmicb.2024.1465373 | 2024 | ||
| Fermentation for Revalorisation of Fruit and Vegetable By-Products: A Sustainable Approach Towards Minimising Food Loss and Waste. | Salas-Millan JA, Aguayo E. | Foods | 10.3390/foods13223680 | 2024 | ||
| Biotechnology | Lacticaseibacillus rhamnosus: A Suitable Candidate for the Construction of Novel Bioengineered Probiotic Strains for Targeted Pathogen Control. | Mathipa-Mdakane MG, Thantsha MS. | Foods | 10.3390/foods11060785 | 2022 | |
| Metabolism | Folic acid supplementation in children with sickle cell disease: a randomized double-blind noninferiority cross-over trial. | Williams BA, McCartney H, Singer J, Devlin AM, Vercauteren S, Amid A, Wu JK, Karakochuk CD. | Am J Clin Nutr | 10.1016/j.ajcnut.2025.02.001 | 2025 | |
| Effects of Bacterial Lysates and Metabolites on Collagen Homeostasis in TNF-alpha-Challenged Human Dermal Fibroblasts. | Huuskonen L, Anglenius H, Ahonen I, Tiihonen K. | Microorganisms | 10.3390/microorganisms11061465 | 2023 | ||
| Probiotic Potential of a Folate-Producing Strain Latilactobacillus sakei LZ217 and Its Modulation Effects on Human Gut Microbiota. | Liu M, Chen Q, Sun Y, Zeng L, Wu H, Gu Q, Li P. | Foods | 10.3390/foods11020234 | 2022 | ||
| New Biological and Chemical Insights into Optimization of Chamomile Extracts by Using Artificial Neural Network (ANN) Model. | Cvetanovic Kljakic A, Radosavljevic M, Zengin G, Yan L, Gasic U, Kojic P, Torbica A, Belovic M, Zekovic Z. | Plants (Basel) | 10.3390/plants12061211 | 2023 | ||
| Human microbiome derived synthetic antimicrobial peptides with activity against Gram-negative, Gram-positive, and antibiotic resistant bacteria. | Mousa WK, Shaikh AY, Ghemrawi R, Aldulaimi M, Al Ali A, Sammani N, Khair M, Helal MI, Al-Marzooq F, Oueis E. | RSC Med Chem | 10.1039/d4md00383g | 2024 | ||
| Metabolism | In Vitro Framework to Assess the Anti-Helicobacter pylori Potential of Lactic Acid Bacteria Secretions as Alternatives to Antibiotics. | Whiteside SA, Mohiuddin MM, Shlimon S, Chahal J, MacPherson CW, Jass J, Tompkins TA, Creuzenet C. | Int J Mol Sci | 10.3390/ijms22115650 | 2021 | |
| The Intriguing Connection Between the Gut and Lung Microbiomes. | Druszczynska M, Sadowska B, Kulesza J, Gasienica-Gliwa N, Kulesza E, Fol M. | Pathogens | 10.3390/pathogens13111005 | 2024 | ||
| Transcriptome | Bacterial Tolerance to 1-Butanol and 2-Butanol: Quantitative Assessment and Transcriptomic Response. | Arsov A, Petrova P, Gerginova M, Tsigoriyna L, Armenova N, Ignatova I, Petrov K. | Int J Mol Sci | 10.3390/ijms252413336 | 2024 | |
| Pathogenicity | Searching for the one(s): Using Probiotics as Anthelmintic Treatments. | Saracino MP, Vila CC, Baldi PC, Gonzalez Maglio DH. | Front Pharmacol | 10.3389/fphar.2021.714198 | 2021 | |
| Metabolism | Folate-producing bifidobacteria: metabolism, genetics, and relevance | D'Aimmo M, Satti M, Scarafile D, Modesto M, Pascarelli S, Biagini S, Luiselli D, Mattarelli P, Andlid T. | Microbiome Res Rep | 2023 | ||
| Valorization of Vegetable Food Waste and By-Products Through Fermentation Processes. | Sabater C, Ruiz L, Delgado S, Ruas-Madiedo P, Margolles A. | Front Microbiol | 10.3389/fmicb.2020.581997 | 2020 | ||
| Isolation, Potential Beneficial Properties, and Assessment of Storage Stability of Direct-Fed Microbial Consortia from Wild-Type Chicken Intestine. | Gomez-Velazquez HDJ, Pena-Medellin P, Guzman-Hernandez CO, Gonzalez-Davalos L, Varela-Echavarria A, Shimada A, Mora O. | Probiotics Antimicrob Proteins | 10.1007/s12602-024-10387-0 | 2025 | ||
| Pathogenicity | Toyoncin, a Novel Leaderless Bacteriocin That Is Produced by Bacillus toyonensis XIN-YC13 and Specifically Targets B. cereus and Listeria monocytogenes. | Wang J, Xu H, Liu S, Song B, Liu H, Li F, Deng S, Wang G, Zeng H, Zeng X, Xu D, Zhang B, Xin B. | Appl Environ Microbiol | 10.1128/aem.00185-21 | 2021 | |
| Safety aspects, probiotic potentials of yeast and lactobacillus isolated from fermented foods in North-Eastern India, and its anti-inflammatory activity. | Hati S, Ramanuj K, Basaiawmoit B, Sreeja V, Maurya R, Bishnoi M, Kondepudi KK, Mishra B. | Braz J Microbiol | 10.1007/s42770-023-01093-0 | 2023 | ||
| Pathogenicity | Probiotics Modulate Host Immune Response and Interact with the Gut Microbiota: Shaping Their Composition and Mediating Antibiotic Resistance. | Mousa WK, Mousa S, Ghemrawi R, Obaid D, Sarfraz M, Chehadeh F, Husband S. | Int J Mol Sci | 10.3390/ijms241813783 | 2023 | |
| Nutrition and Health through the Use of Probiotic Strains in Fermentation to Produce Non-Dairy Functional Beverage Products Supporting Gut Microbiota. | Dahiya D, Nigam PS. | Foods | 10.3390/foods11182760 | 2022 | ||
| Probiotic-Derived Bioactive Compounds in Colorectal Cancer Treatment. | Thoda C, Touraki M. | Microorganisms | 10.3390/microorganisms11081898 | 2023 | ||
| Enzymology | Functional characterization and immunomodulatory properties of Lactobacillus helveticus strains isolated from Italian hard cheeses. | Zago M, Massimiliano L, Bonvini B, Penna G, Giraffa G, Rescigno M. | PLoS One | 10.1371/journal.pone.0245903 | 2021 | |
| Potentially Synbiotic Yellow Mombin Beverages: Stability during Refrigerated Storage, Physicochemical Characteristics, and Sensory Properties. | Ribeiro LEGGT, Batista LDSP, Assis CF, Damasceno KSFSC, Sousa Junior FC. | Foods | 10.3390/foods12101994 | 2023 | ||
| Lactobacillus Probiotic Strains Differ in Their Ability to Adhere to Human Lung Epithelial Cells and to Prevent Adhesion of Clinical Isolates of Pseudomonas aeruginosa from Cystic Fibrosis Lung. | Batoni G, Kaya E, Catelli E, Quinti S, Botti M, De Carli A, Bianchi M, Maisetta G, Esin S. | Microorganisms | 10.3390/microorganisms11071707 | 2023 | ||
| Pathogenicity | Influence of Proton Pump Inhibitors and Histamine Receptor 2 Antagonists on Blastocystis ST3 and Selected Microorganisms of Intestinal Microbiota In Vitro. | Lepczynska M, Dzika E, Chen W, Lu CY. | Clin Transl Gastroenterol | 10.14309/ctg.0000000000000325 | 2021 | |
| Electrospinning and Electrospraying: Emerging Techniques for Probiotic Stabilization and Application. | Feng K, Huangfu L, Liu C, Bonfili L, Xiang Q, Wu H, Bai Y. | Polymers (Basel) | 10.3390/polym15102402 | 2023 | ||
| Protective Effects of Novel Lactobacillaceae Strains Isolated from Chicken Caeca against Necrotic Enteritis Infection: In Vitro and In Vivo Evidences. | Vieco-Saiz N, Belguesmia Y, Raspoet R, Auclair E, Padgett C, Bailey C, Gancel F, Drider D. | Microorganisms | 10.3390/microorganisms10010152 | 2022 | ||
| Immunomodulatory Effects of Probiotics: A Novel Preventive Approach for the Control of Bovine Mastitis. | Kober AKMH, Saha S, Islam MA, Rajoka MSR, Fukuyama K, Aso H, Villena J, Kitazawa H. | Microorganisms | 10.3390/microorganisms10112255 | 2022 | ||
| Characteristics of Probiotic Preparations and Their Applications. | Wang G, Chen Y, Xia Y, Song X, Ai L. | Foods | 10.3390/foods11162472 | 2022 | ||
| Metabolic insights of lactic acid bacteria in reducing off-flavors and antinutrients in plant-based fermented dairy alternatives. | Molina GES, Ras G, da Silva DF, Duedahl-Olesen L, Hansen EB, Bang-Berthelsen CH. | Compr Rev Food Sci Food Saf | 10.1111/1541-4337.70134 | 2025 | ||
| Efficient production of lactic acid from cellulose and xylan in sugarcane bagasse by newly isolated Lactiplantibacillus plantarum and Levilactobacillus brevis through simultaneous saccharification and co-fermentation process. | Haokok C, Lunprom S, Reungsang A, Salakkam A. | Heliyon | 10.1016/j.heliyon.2023.e17935 | 2023 | ||
| Lacticaseibacillus spp.; Probiotic candidates from Palmyra palm sugar possesses antimicrobial and anti-biofilm activities against methicillin-resistant Staphylococcus aureus. | Mitsuwan W, Sornsenee P, Romyasamit C. | Vet World | 10.14202/vetworld.2022.299-308 | 2022 | ||
| Why do lactic acid bacteria thrive in chain elongation microbiomes? | Ulcar B, Regueira A, Podojstersek M, Boon N, Ganigue R. | Front Bioeng Biotechnol | 10.3389/fbioe.2023.1291007 | 2023 | ||
| Binding and Detoxification of Insecticides by Potentially Probiotic Lactic Acid Bacteria Isolated from Honeybee (Apis mellifera L.) Environment-An In Vitro Study. | Leska A, Nowak A, Miskiewicz K, Rosicka-Kaczmarek J. | Cells | 10.3390/cells11233743 | 2022 | ||
| Lactobacillus rhamnosus colonisation antagonizes Candida albicans by forcing metabolic adaptations that compromise pathogenicity. | Alonso-Roman R, Last A, Mirhakkak MH, Sprague JL, Moller L, Grossmann P, Graf K, Gratz R, Mogavero S, Vylkova S, Panagiotou G, Schauble S, Hube B, Gresnigt MS. | Nat Commun | 10.1038/s41467-022-30661-5 | 2022 | ||
| Genetics | Intra-species variation within Lactobacillus rhamnosus correlates to beneficial or harmful outcomes: lessons from the oral cavity. | Nadkarni MA, Deshpande NP, Wilkins MR, Hunter N. | BMC Genomics | 10.1186/s12864-020-07062-3 | 2020 | |
| Genetics | Correlation of Lactobacillus rhamnosus Genotypes and Carbohydrate Utilization Signatures Determined by Phenotype Profiling. | Ceapa C, Lambert J, van Limpt K, Wels M, Smokvina T, Knol J, Kleerebezem M. | Appl Environ Microbiol | 10.1128/aem.00851-15 | 2015 | |
| Targeted Delivery of Probiotics: Perspectives on Research and Commercialization. | Yoha KS, Nida S, Dutta S, Moses JA, Anandharamakrishnan C. | Probiotics Antimicrob Proteins | 10.1007/s12602-021-09791-7 | 2022 | ||
| Comparison of serum and red blood cell folate microbiologic assays for national population surveys. | Pfeiffer CM, Zhang M, Lacher DA, Molloy AM, Tamura T, Yetley EA, Picciano MF, Johnson CL. | J Nutr | 10.3945/jn.111.141515 | 2011 | ||
| Metabolism | Probiotic Lactobacillus rhamnosus Reduces Organophosphate Pesticide Absorption and Toxicity to Drosophila melanogaster. | Trinder M, McDowell TW, Daisley BA, Ali SN, Leong HS, Sumarah MW, Reid G. | Appl Environ Microbiol | 10.1128/aem.01510-16 | 2016 | |
| Metabolism | Functional analysis of D-alanylation of lipoteichoic acid in the probiotic strain Lactobacillus rhamnosus GG. | Perea Velez M, Verhoeven TL, Draing C, Von Aulock S, Pfitzenmaier M, Geyer A, Lambrichts I, Grangette C, Pot B, Vanderleyden J, De Keersmaecker SC. | Appl Environ Microbiol | 10.1128/aem.02083-06 | 2007 | |
| Pathogenicity | Lactobacillus rhamnosus GG modulates innate signaling pathway and cytokine responses to rotavirus vaccine in intestinal mononuclear cells of gnotobiotic pigs transplanted with human gut microbiota. | Wang H, Gao K, Wen K, Allen IC, Li G, Zhang W, Kocher J, Yang X, Giri-Rachman E, Li GH, Clark-Deener S, Yuan L. | BMC Microbiol | 10.1186/s12866-016-0727-2 | 2016 | |
| Pathogenicity | Antifungal defense of probiotic Lactobacillus rhamnosus GG is mediated by blocking adhesion and nutrient depletion. | Mailander-Sanchez D, Braunsdorf C, Grumaz C, Muller C, Lorenz S, Stevens P, Wagener J, Hebecker B, Hube B, Bracher F, Sohn K, Schaller M. | PLoS One | 10.1371/journal.pone.0184438 | 2017 | |
| Risks associated with high-dose Lactobacillus rhamnosus in an Escherichia coli model of piglet diarrhoea: intestinal microbiota and immune imbalances. | Li XQ, Zhu YH, Zhang HF, Yue Y, Cai ZX, Lu QP, Zhang L, Weng XG, Zhang FJ, Zhou D, Yang JC, Wang JF. | PLoS One | 10.1371/journal.pone.0040666 | 2012 | ||
| Pathogenicity | Probiotic Lactobacillus rhamnosus GG enhanced Th1 cellular immunity but did not affect antibody responses in a human gut microbiota transplanted neonatal gnotobiotic pig model. | Wen K, Tin C, Wang H, Yang X, Li G, Giri-Rachman E, Kocher J, Bui T, Clark-Deener S, Yuan L. | PLoS One | 10.1371/journal.pone.0094504 | 2014 | |
| Impact of environmental and genetic factors on biofilm formation by the probiotic strain Lactobacillus rhamnosus GG. | Lebeer S, Verhoeven TL, Perea Velez M, Vanderleyden J, De Keersmaecker SC. | Appl Environ Microbiol | 10.1128/aem.01393-07 | 2007 | ||
| Probiotic application to hatching egg surface supports microbiota development and acquisition in broiler embryos and hatchlings. | Gao M, Ren Y, Lu S, Reddyvari R, Amalaradjou MA. | Poult Sci | 10.1016/j.psj.2025.105391 | 2025 | ||
| Biotechnology | In vitro digestive system simulation and anticancer activity of soymilk fermented by probiotics and synbiotics immobilised on agro-industrial residues. | Gad AI, Orabi MM, Abou-Taleb KA, Abdelghani DY, Amin SA. | Sci Rep | 10.1038/s41598-024-68086-3 | 2024 | |
| Laboratory evaluation of anti-plaque and remineralization efficacy of sugarless probiotic jelly candy supplemented with natural nano prebiotic additive. | Elgamily HM, El-Sayed SM, El-Sayed HS, Youssef AM. | Sci Rep | 10.1038/s41598-023-37645-5 | 2023 | ||
| Metabolism | In ovo probiotic supplementation enhances energy status and promotes growth in developing broiler embryos and hatchlings. | Gao M, Ren Y, Amalaradjou MA. | Poult Sci | 10.1016/j.psj.2025.105442 | 2025 | |
| Biotechnology | Incorporation of probiotics in post-harvest wash treatments reduces Salmonella contamination and improves egg safety. | Reddyvari R, Lu S, Kosuri P, Amalaradjou MA. | Poult Sci | 10.1016/j.psj.2025.105146 | 2025 | |
| Microencapsulation of Probiotics for Enhanced Stability and Health Benefits in Dairy Functional Foods: A Focus on Pasta Filata Cheese. | D'Amico V, Cavaliere M, Ivone M, Lacassia C, Celano G, Vacca M, la Forgia FM, Fontana S, De Angelis M, Denora N, Lopedota AA. | Pharmaceutics | 10.3390/pharmaceutics17020185 | 2025 | ||
| beta-Glucosidase activity and antimicrobial properties of potentially probiotic autochthonous lactic cultures. | Pires de Oliveira Galdino IKC, da Silva MOM, da Silva APA, Santos VN, Feitosa RLP, Ferreira LCN, Dantas GC, Dos Santos Pereira EV, de Oliveira TA, Dos Santos KMO, Egito AS, Alonso Buriti FC, Cardarelli HR. | PeerJ | 10.7717/peerj.16094 | 2023 | ||
| In ovo probiotic supplementation supports hatchability and improves hatchling quality in broilers. | Gao M, Ren Y, Lu S, Reddyvari R, Venkitanarayanan K, Amalaradjou MA. | Poult Sci | 10.1016/j.psj.2024.103624 | 2024 | ||
| Synbiotic yogurt with nanoparticle entrapped rice straw hemicellulose for immediate probiotic support and prebiotic delivery. | Ismail SA, Fayed B, El-Sayed HS, Taie HAA, Hassan AA. | NPJ Sci Food | 10.1038/s41538-025-00539-z | 2025 | ||
| Gut Bacteria-derived Membrane Vesicles Induce Colonic Dysplasia by Inducing DNA Damage in Colon Epithelial Cells. | Miyakawa Y, Otsuka M, Shibata C, Seimiya T, Yamamoto K, Ishibashi R, Kishikawa T, Tanaka E, Isagawa T, Takeda N, Kamio N, Imai K, Fujishiro M. | Cell Mol Gastroenterol Hepatol | 10.1016/j.jcmgh.2024.01.010 | 2024 | ||
| Probiotics, prebiotics, synbiotics and other microbiome-based innovative therapeutics to mitigate obesity and enhance longevity via the gut-brain axis. | Boyajian JL, Islam P, Abosalha A, Schaly S, Thareja R, Kassab A, Arora K, Santos M, Shum-Tim C, Prakash S. | Microbiome Res Rep | 10.20517/mrr.2024.05 | 2024 | ||
| Safety and efficacy of a feed additive consisting of Saccharomyces cerevisiaeNBRC 0203 and Lacticaseibacillus rhamnosusNBRC 3425 as a silage additive for all animal species (EM-Agriton B.V.). | EFSA Panel on Additives and Products or Substances used in Animal Feed (FEEDAP), Villa RE, Azimonti G, Bonos E, Christensen H, Durjava M, Dusemund B, Gehring R, Glandorf B, Kouba M, Lopez-Alonso M, Marcon F, Nebbia C, Pechova A, Prieto-Maradona M, Rohe I, Theodoridou K, Cocconcelli PS, Lopez S, Yurkov A, Anguita M, Brozzi R, Bozzi Cionci N, Innocenti ML, Ortuno J, Valeri P, Garcia-Cazorla Y. | EFSA J | 10.2903/j.efsa.2025.9698 | 2025 | ||
| Genetics | Characterisation of probiotic potential and whole genome analysis of lactic acid bacteria isolated from Tetragonula Laeviceps and Heterotrigona Itama bee bread. | Damayanti E, Anggraeni MA, Nabila TT, Shalahudin A, Wanita YP, Istiqomah L, Sunaryanto R, Wahyono T, Fitrianto N, Chaidir RRA. | Antonie Van Leeuwenhoek | 10.1007/s10482-025-02191-9 | 2025 | |
| Genetics | Genome Mining and Characterization of Two Novel Lacticaseibacillus rhamnosus Probiotic Candidates with Bile Salt Hydrolase Activity. | Agolino G, Cristofolini M, Vaccalluzzo A, Tagliazucchi D, Cattivelli A, Pino A, Caggia C, Solieri L, Randazzo CL. | Biomolecules | 10.3390/biom15010086 | 2025 | |
| Probiotic Properties of Lactic Acid Bacteria Newly Isolated from Algerian Raw Cow's Milk. | Kouadri Boudjelthia N, Belabbas M, Bekenniche N, Monnoye M, Gerard P, Riazi A. | Microorganisms | 10.3390/microorganisms11082091 | 2023 | ||
| A novel bacteriocin against multiple foodborne pathogens from Lacticaseibacillus rhamnosus isolated from juice ferments: ATF perfusion-based preparation of viable cells, characterization, antibacterial and antibiofilm activity. | Chen SY, Yang RS, Ci BQ, Xin WG, Zhang QL, Lin LB, Wang F. | Curr Res Food Sci | 10.1016/j.crfs.2023.100484 | 2023 | ||
| In vitro anti-tuberculosis effect of probiotic Lacticaseibacillus rhamnosus PMC203 isolated from vaginal microbiota. | Rahim MA, Seo H, Kim S, Tajdozian H, Barman I, Lee Y, Lee S, Song HY. | Sci Rep | 10.1038/s41598-022-12413-z | 2022 | ||
| Genetics | Establishment of a polymerase chain reaction-based method for strain-level management of Enterococcus faecalis EF-2001 using species-specific sequences identified by whole genome sequences. | Hamamoto H, Ogasawara AA, Iwasa M, Sekimizu K. | Front Microbiol | 10.3389/fmicb.2022.959063 | 2022 | |
| Enzymology | Separation and Purification of Antioxidant Peptide from Fermented Whey Protein by Lactobacillus rhamnosus B2-1. | Guo H, Fan L, Ding L, Yang W, Zang C, Guan H. | Food Sci Anim Resour | 10.5851/kosfa.2022.e52 | 2023 | |
| Metabolism | Lactobacillus rhamnosus JCM 2771: impact on metabolism of isoflavonoids in the fecal flora from a male equol producer. | Tamura M, Hori S, Nakagawa H. | Curr Microbiol | 10.1007/s00284-011-9904-6 | 2011 | |
| Physicochemical and sensory characterization of functional synbiotic Labneh fortified with the bacteriocin-producing Lactiplantibacillus plantarum strain GA7 and nano-encapsulated Tirmania pinoyi extract. | Daba GM, Elkhateeb WA, Saleh SAA, Soliman TN, El-Dein AN. | Microb Cell Fact | 10.1186/s12934-024-02631-7 | 2025 | ||
| Lactobacillus rhamnosus GG ameliorates osteoporosis in ovariectomized rats by regulating the Th17/Treg balance and gut microbiota structure. | Guo M, Liu H, Yu Y, Zhu X, Xie H, Wei C, Mei C, Shi Y, Zhou N, Qin K, Li W. | Gut Microbes | 10.1080/19490976.2023.2190304 | 2023 | ||
| Functional genome analysis and anti-Helicobacter pylori activity of a novel bacteriocinogenic Lactococcus sp. NH2-7C from Thai fermented pork (Nham). | Kingkaew E, Woraprayote W, Booncharoen A, Niwasabutra K, Janyaphisan T, Vilaichone RK, Yamaoka Y, Visessanguan W, Tanasupawat S. | Sci Rep | 10.1038/s41598-023-47687-4 | 2023 | ||
| Phylogeny | Administration of two probiotic strains during early childhood does not affect the endogenous gut microbiota composition despite probiotic proliferation. | Laursen MF, Laursen RP, Larnkjaer A, Michaelsen KF, Bahl MI, Licht TR. | BMC Microbiol | 10.1186/s12866-017-1090-7 | 2017 | |
| Occurrence and genetic diversity of prophage sequences identified in the genomes of L. casei group bacteria. | Jarocki P, Komon-Janczara E, Mlodzinska A, Sadurski J, Kolodzinska K, Laczmanski L, Panek J, Frac M. | Sci Rep | 10.1038/s41598-023-35823-z | 2023 | ||
| Phylogeny | Intraspecific genotypic characterization of Lactobacillus rhamnosus strains intended for probiotic use and isolates of human origin. | Vancanneyt M, Huys G, Huys G, Lefebvre K, Vankerckhoven V, Goossens H, Swings J. | Appl Environ Microbiol | 10.1128/aem.00091-06 | 2006 | |
| Identification of sulfur components enhancing the anti-Candida effect of Lactobacillus rhamnosus Lcr35. | Dausset C, Bornes S, Miquel S, Kondjoyan N, Angenieux M, Nakusi L, Veisseire P, Alaterre E, Bermudez-Humaran LG, Langella P, Engel E, Forestier C, Nivoliez A. | Sci Rep | 10.1038/s41598-020-74027-7 | 2020 | ||
| Pathogenicity | Lactobacilli Cell-Free Supernatants Modulate Inflammation and Oxidative Stress in Human Microglia via NRF2-SOD1 Signaling. | Di Chiano M, Rocchetti MT, Spano G, Russo P, Allegretta C, Milior G, Gadaleta RM, Sallustio F, Pontrelli P, Gesualdo L, Avolio C, Fiocco D, Gallone A. | Cell Mol Neurobiol | 10.1007/s10571-024-01494-1 | 2024 | |
| Complete Genome Sequence of Lacticaseibacillus rhamnosus CAU 1365, Isolated from Kimchi. | Lee Y, Kim JH, Kim W. | Microbiol Resour Announc | 10.1128/mra.00932-21 | 2021 | ||
| Clinical Potential of Novel Microbial Therapeutic LP51 Based on Xerosis-Microbiome Index. | Kim S, Rahim MA, Tajdozian H, Barman I, Park HA, Yoon Y, Jo S, Lee S, Shuvo MSH, Bae SH, Lee H, Ju S, Park CE, Kim HK, Han JH, Kim JW, Yoon SG, Kim JH, Choi YG, Lee S, Seo H, Song HY. | Cells | 10.3390/cells13232029 | 2024 | ||
| Application of probiotic bacteria in ginsenoside bioconversion and enhancing its health-promoting benefits: a review. | Vasquez R, Song JH, Park YS, Paik HD, Kang DK. | Food Sci Biotechnol | 10.1007/s10068-024-01734-6 | 2025 | ||
| Uptake of Levilactobacillus brevis JCM 1059 by THP-1 Cells via Interaction between SlpB and CAP-1 Promotes Cytokine Production. | Yin T, Zhang X, Iwatani S, Miyanaga K, Yamamoto N. | Microorganisms | 10.3390/microorganisms11020247 | 2023 | ||
| Low-Molecular-Weight Compounds Produced by the Intestinal Microbiota and Cardiovascular Disease. | Cuervo L, McAlpine PL, Olano C, Fernandez J, Lombo F. | Int J Mol Sci | 10.3390/ijms251910397 | 2024 | ||
| Biotechnology | Direct lactic acid production from household food waste by lactic acid bacteria. | Song L, Liu S, Liu R, Yang D, Dai X | Sci Total Environ | 10.1016/j.scitotenv.2022.156479 | 2022 | |
| Metabolism | Preparation, Characterization, and Mechanism of Antifreeze Peptides from Defatted Antarctic Krill (Euphausia superba) on Lactobacillus rhamnosus. | Liu Y, Yu X, Zhu Y, Yang W, Zeng Y, Hu Y, Jiang W | Molecules | 10.3390/molecules27092771 | 2022 | |
| Antifreeze Peptides Preparation from Tilapia Skin and Evaluation of Its Cryoprotective Effect on Lacticaseibacillus rhamnosus. | Zeng Y, Li W, Liu Y, Jiang W | Foods | 10.3390/foods11060857 | 2022 | ||
| Pathogenicity | A Rapid Screening Method of Candidate Probiotics for Inflammatory Bowel Diseases and the Anti-inflammatory Effect of the Selected Strain Bacillus smithii XY1. | Huang X, Ai F, Ji C, Tu P, Gao Y, Wu Y, Yan F, Yu T | Front Microbiol | 10.3389/fmicb.2021.760385 | 2021 | |
| Cell-free supernatants produced by lactic acid bacteria reduce Salmonella population in vitro. | Evangelista AG, Correa JAF, Dos Santos JVG, Matte EHC, Milek MM, Biauki GC, Costa LB, Luciano FB | Microbiology (Reading) | 10.1099/mic.0.001102 | 2021 | ||
| Microencapsulation of Lactobacillus rhamnosus ATCC 7469 by spray drying using maltodextrin, whey protein concentrate and trehalose. | Agudelo-Chaparro J, Ciro-Velasquez HJ, Sepulveda-Valencia JU, Perez-Monterroza EJ | Food Sci Technol Int | 10.1177/10820132211020621 | 2021 | ||
| Pathogenicity | Effects of Lactobacillus rhamnosus ATCC 7469 on Different Parameters Related to Health Status of Rainbow Trout (Oncorhynchus mykiss) and the Protection Against Yersinia ruckeri. | Hooshyar Y, Abedian Kenari A, Paknejad H, Gandomi H | Probiotics Antimicrob Proteins | 10.1007/s12602-020-09645-8 | 2020 | |
| Pathogenicity | Rheological properties of a neutral polysaccharide extracted from maca (Lepidium meyenii Walp.) roots with prebiotic and anti-inflammatory activities. | Lee YK, Jung SK, Chang YH | Int J Biol Macromol | 10.1016/j.ijbiomac.2020.02.307 | 2020 | |
| Metabolism | Growth Response of Lactobacillus rhamnosus Chloramphenicol-Resistant Strain ATCC 27773 to Pteroyl-Mono- and -Di-Glutamates. | Koseki K, Okamoto N, Bito T, Ebara S, Yabuta Y, Watanabe F | J Nutr Sci Vitaminol (Tokyo) | 10.3177/jnsv.65.545 | 2019 | |
| Metabolism | Immobilization of Lactobacillus rhamnosus in polyvinyl alcohol/calcium alginate matrix for production of lactic acid. | Radosavljevic M, Levic S, Belovic M, Pejin J, Djukic-Vukovic A, Mojovic L, Nedovic V | Bioprocess Biosyst Eng | 10.1007/s00449-019-02228-0 | 2019 | |
| Non-thermal plasma and ultrasound-assisted open lactic acid fermentation of distillery stillage. | Djukic-Vukovic A, Lazovic S, Mladenovic D, Knezevic-Jugovic Z, Pejin J, Mojovic L | Environ Sci Pollut Res Int | 10.1007/s11356-019-04894-9 | 2019 | ||
| Lactobacillus rhamnosus biosurfactant inhibits biofilm formation and gene expression of caries-inducing Streptococcus mutans. | Tahmourespour A, Kasra-Kermanshahi R, Salehi R | Dent Res J (Isfahan) | 2019 | |||
| Metabolism | Utilization of brewing and malting by-products as carrier and raw materials in l-(+)-lactic acid production and feed application. | Radosavljevic M, Pejin J, Pribic M, Kocic-Tanackov S, Romanic R, Mladenovic D, Djukic-Vukovic A, Mojovic L | Appl Microbiol Biotechnol | 10.1007/s00253-019-09683-5 | 2019 | |
| Promoting Probiotics Survival by Microencapsualtion with Hylon Starch and Genipin Cross-linked Coatings in Simulated Gastro-intestinal Condition and Heat Treatment. | Khosravi Zanjani MA, Ehsani MR, Ghiassi Tarzi B, Sharifan A | Iran J Pharm Res | 2018 | |||
| Metabolism | Lipoteichoic acids are embedded in cell walls during logarithmic phase, but exposed on membrane vesicles in Lactobacillus gasseri JCM 1131(T). | Shiraishi T, Yokota S, Sato Y, Ito T, Fukiya S, Yamamoto S, Sato T, Yokota A | Benef Microbes | 10.3920/BM2017.0124 | 2018 | |
| Pathogenicity | Effects of dietary Lactobacillus rhamnosus JCM1136 and Lactococcus lactis subsp. lactis JCM5805 on the growth, intestinal microbiota, morphology, immune response and disease resistance of juvenile Nile tilapia, Oreochromis niloticus. | Xia Y, Lu M, Chen G, Cao J, Gao F, Wang M, Liu Z, Zhang D, Zhu H, Yi M | Fish Shellfish Immunol | 10.1016/j.fsi.2018.03.020 | 2018 | |
| Genetics | Draft Genome Sequence of Lactobacillus rhamnosus NRRL B-442, a Potential Probiotic Strain. | Muyyarikkandy MS, Alqahtani FH, Mandoiu I, Amalaradjou MA | Genome Announc | 10.1128/genomeA.00046-18 | 2018 | |
| Metabolism | Biotechnological conversion of spent coffee grounds into lactic acid. | Hudeckova H, Neureiter M, Obruca S, Fruhauf S, Marova I | Lett Appl Microbiol | 10.1111/lam.12849 | 2018 | |
| Pathogenicity | Lactobacillus rhamnosus reduces parasite load on Toxocara canis experimental infection in mice, but has no effect on the parasite in vitro. | Walcher DL, Cruz LAX, de Lima Telmo P, Martins LHR, da Costa de Avila LF, Berne MEA, Scaini CJ | Parasitol Res | 10.1007/s00436-017-5712-7 | 2017 | |
| Metabolism | Effect of Lactobacillus rhamnosus on the response of Galleria mellonella against Staphylococcus aureus and Escherichia coli infections. | Jorjao AL, de Oliveira FE, Leao MVP, Jorge AOC, de Oliveira LD | Arch Microbiol | 10.1007/s00203-017-1441-7 | 2017 | |
| Cultivation | Pre-cultivation with Selected Prebiotics Enhances the Survival and the Stress Response of Lactobacillus rhamnosus Strains in Simulated Gastrointestinal Transit. | Succi M, Tremonte P, Pannella G, Tipaldi L, Cozzolino A, Romaniello R, Sorrentino E, Coppola R | Front Microbiol | 10.3389/fmicb.2017.01067 | 2017 | |
| Pathogenicity | Lactobacillus rhamnosus ATCC 7469 exopolysaccharides synergizes with low level ionizing radiation to modulate signaling molecular targets in colorectal carcinogenesis in rats. | Zahran WE, Elsonbaty SM, Moawed FSM | Biomed Pharmacother | 10.1016/j.biopha.2017.05.089 | 2017 | |
| Pathogenicity | Dentifrice Containing Extract of Rosmarinus officinalis Linn.: An Antimicrobial Evaluation. | Valones MA, Higino JS, Souza PR, Crovella S, Caldas AF Junior, Carvalho AA | Braz Dent J | 10.1590/0103-6440201600672 | 2016 | |
| Enzymology | Lactobacillus is able to alter the virulence and the sensitivity profile of Candida albicans. | Oliveira VM, Santos SS, Silva CR, Jorge AO, Leao MV | J Appl Microbiol | 10.1111/jam.13289 | 2016 | |
| Metabolism | Live and Heat-Killed Lactobacillus rhamnosus ATCC 7469 May Induce Modulatory Cytokines Profiles on Macrophages RAW 264.7. | Jorjao AL, de Oliveira FE, Leao MV, Carvalho CA, Jorge AO, de Oliveira LD | ScientificWorldJournal | 10.1155/2015/716749 | 2015 | |
| Biotechnology | Wastes from bioethanol and beer productions as substrates for l(+) lactic acid production - A comparative study. | Djukic-Vukovic A, Mladenovic D, Radosavljevic M, Kocic-Tanackov S, Pejin J, Mojovic L | Waste Manag | 10.1016/j.wasman.2015.11.031 | 2015 | |
| Metabolism | A Selected Lactobacillus rhamnosus Strain Promotes EGFR-Independent Akt Activation in an Enterotoxigenic Escherichia coli K88-Infected IPEC-J2 Cell Model. | Zhang W, Zhu YH, Yang JC, Yang GY, Zhou D, Wang JF | PLoS One | 10.1371/journal.pone.0125717 | 2015 | |
| Pathogenicity | The potential hazards of Aspergillus sp. in foods and feeds, and the role of biological treatment: a review. | Sheikh-Ali SI, Ahmad A, Mohd-Setapar SH, Zakaria ZA, Abdul-Talib N, Khamis AK, Hoque ME | J Microbiol | 10.1007/s12275-014-4294-7 | 2014 | |
| Metabolism | Shelf life stability of lactobacilli encapsulated in raspberry powder: insights into non-dairy probiotics. | Anekella K, Orsat V | Int J Food Sci Nutr | 10.3109/09637486.2013.869793 | 2014 | |
| Biotechnology | Dose-dependent effects of Lactobacillus rhamnosus on serum interleukin-17 production and intestinal T-cell responses in pigs challenged with Escherichia coli. | Zhu YH, Li XQ, Zhang W, Zhou D, Liu HY, Wang JF | Appl Environ Microbiol | 10.1128/AEM.03668-13 | 2014 | |
| Metabolism | Antimicrobial potential for the combination of bovine lactoferrin or its hydrolysate with lactoferrin-resistant probiotics against foodborne pathogens. | Chen PW, Jheng TT, Shyu CL, Mao FC | J Dairy Sci | 10.3168/jds.2012-6112 | 2013 | |
| Metabolism | Lactic acid production on liquid distillery stillage by Lactobacillus rhamnosus immobilized onto zeolite. | Djukic-Vukovic AP, Mojovic LV, Jokic BM, Nikolic SB, Pejin JD | Bioresour Technol | 10.1016/j.biortech.2012.10.066 | 2012 | |
| Biotechnology | Integrated production of lactic acid and biomass on distillery stillage. | Djukic-Vukovic AP, Mojovic LV, Vukasinovic-Sekulic MS, Nikolic SB, Pejin JD | Bioprocess Biosyst Eng | 10.1007/s00449-012-0842-x | 2012 | |
| Metabolism | Effect of different fermentation parameters on L-lactic acid production from liquid distillery stillage. | Djukic-Vukovic AP, Mojovic LV, Vukasinovic-Sekulic MS, Rakin MB, Nikolic SB, Pejin JD, Bulatovic ML | Food Chem | 10.1016/j.foodchem.2012.03.011 | 2012 | |
| Pathogenicity | Protective effect of Lactobacillus casei strain Shirota against lethal infection with multi-drug resistant Salmonella enterica serovar Typhimurium DT104 in mice. | Asahara T, Shimizu K, Takada T, Kado S, Yuki N, Morotomi M, Tanaka R, Nomoto K | J Appl Microbiol | 10.1111/j.1365-2672.2010.04884.x | 2010 | |
| Stress | Effect of germination and thermal treatments on folates in rye. | Kariluoto S, Liukkonen KH, Myllymaki O, Vahteristo L, Kaukovirta-Norja A, Piironen V | J Agric Food Chem | 10.1021/jf061734j | 2006 | |
| Metabolism | Effects of yeasts and bacteria on the levels of folates in rye sourdoughs. | Kariluoto S, Aittamaa M, Korhola M, Salovaara H, Vahteristo L, Piironen V | Int J Food Microbiol | 10.1016/j.ijfoodmicro.2005.06.013 | 2005 | |
| Phylogeny | Bile salt and acid tolerance of Lactobacillus rhamnosus strains isolated from Parmigiano Reggiano cheese. | Succi M, Tremonte P, Reale A, Sorrentino E, Grazia L, Pacifico S, Coppola R | FEMS Microbiol Lett | 10.1016/j.femsle.2005.01.037 | 2005 | |
| Metabolism | Immune responses in rainbow trout Oncorhynchus mykiss induced by a potential probiotic bacteria Lactobacillus rhamnosus JCM 1136. | Panigrahi A, Kiron V, Kobayashi T, Puangkaew J, Satoh S, Sugita H | Vet Immunol Immunopathol | 10.1016/j.vetimm.2004.08.006 | 2004 | |
| Metabolism | Glycerol metabolism of Lactobacillus rhamnosus ATCC 7469: cloning and expression of two glycerol kinase genes. | Alvarez Mde F, Medina R, Pasteris SE, Strasser de Saad AM, Sesma F | J Mol Microbiol Biotechnol | 10.1159/000079826 | 2004 | |
| Phylogeny | Construction and use of a computerized DNA fingerprint database for lactic acid bacteria from silage. | Chan RK, Wortman CR, Smiley BK, Hendrick CA | J Microbiol Methods | 10.1016/s0167-7012(03)00186-6 | 2003 | |
| Pathogenicity | Phosphatidylinositol-specific phospholipase C activity in Lactobacillus rhamnosus with capacity to translocate. | Rodriguez AV, Baigori MD, Alvarez S, Castro GR, Oliver G | FEMS Microbiol Lett | 10.1111/j.1574-6968.2001.tb10858.x | 2001 | |
| Phylogeny | Identification of salivary Lactobacillus rhamnosus species by DNA profiling and a specific probe. | Richard B, Groisillier A, Badet C, Dorignac G, Lonvaud-Funel A | Res Microbiol | 10.1016/s0923-2508(01)01187-1 | 2001 | |
| Metabolism | Influence of temperature on flavour compound production from citrate by Lactobacillus rhamnosus ATCC 7469. | De Figueroa RM, Oliver G, Benito de Cardenas IL | Microbiol Res | 10.1016/s0944-5013(01)80002-1 | 2001 | |
| Phylogeny | Comparison of ribotyping, randomly amplified polymorphic DNA analysis, and pulsed-field gel electrophoresis in typing of Lactobacillus rhamnosus and L. casei strains. | Tynkkynen S, Satokari R, Saarela M, Mattila-Sandholm T, Saxelin M | Appl Environ Microbiol | 10.1128/AEM.65.9.3908-3914.1999 | 1999 | |
| Metabolism | Insertional inactivation of genes responsible for the D-alanylation of lipoteichoic acid in Streptococcus gordonii DL1 (Challis) affects intrageneric coaggregations. | Clemans DL, Kolenbrander PE, Debabov DV, Zhang Q, Lunsford RD, Sakone H, Whittaker CJ, Heaton MP, Neuhaus FC | Infect Immun | 10.1128/IAI.67.5.2464-2474.1999 | 1999 | |
| Pathogenicity | Lactobacillus rhamnosus GG (ATCC 53103) and platelet aggregation in vitro. | Korpela R, Moilanen E, Saxelin M, Vapaatalo H | Int J Food Microbiol | 10.1016/s0168-1605(97)00049-4 | 1997 | |
| Enzymology | Inhibition of purified enolases from oral bacteria by fluoride. | Guha-Chowdhury N, Clark AG, Sissons CH | Oral Microbiol Immunol | 10.1111/j.1399-302x.1997.tb00623.x | 1997 | |
| Metabolism | Inducible transport of citrate in Lactobacillus rhamnosus ATCC 7469. | de Figueroa RM, Benito de Cardenas IL, Sesma F, Alvarez F, de Ruiz Holgado AP, Oliver G | J Appl Bacteriol | 10.1111/j.1365-2672.1996.tb03518.x | 1996 | |
| Anaerobic flora, Selenomonas ruminis sp. nov., and the bacteriocinogenic Ligilactobacillus salivarius strain MP3 from crossbred-lactating goats. | Poothong S, Tanasupawat S, Chanpongsang S, Kingkaew E, Nuengjamnong C. | Sci Rep | 10.1038/s41598-024-54686-6 | 2024 | ||
| Phylogeny | Lacticaseibacillus parahuelsenbergensis sp. nov., Lacticaseibacillus styriensis sp. nov. and Lacticaseibacillus zeae subsp. silagei subsp. nov., isolated from different grass and corn silage. | Grabner F M, Grabner H M, Schein H, Schrank A, Toglhofer M, Weidenholzer E, Ruckert-Reed C, Busche T, Buchebner-Jance M. | Int J Syst Evol Microbiol | 10.1099/ijsem.0.006441 | 2024 | |
| Phylogeny | Lactobacillus brantae sp. nov., isolated from faeces of Canada geese (Branta canadensis). | Volokhov DV, Amselle M, Beck BJ, Popham DL, Whittaker P, Wang H, Kerrigan E, Chizhikov VE | Int J Syst Evol Microbiol | 10.1099/ijs.0.033852-0 | 2011 |
| #8433 | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20021 |
| #20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 ) |
| #20216 | Curators of the JMRC: Jena Microbial Resource Collection (JMRC): |
| #20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 ) |
| #41838 | ; Curators of the CIP; |
| #47413 | Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 21452 |
| #66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) . |
| #66794 | Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 ) |
| #67770 | Japan Collection of Microorganism (JCM) ; Curators of the JCM; |
| #68371 | Automatically annotated from API 50CH acid . |
| #68374 | Automatically annotated from API ID32E . |
| #68379 | Automatically annotated from API Coryne . |
| #68381 | Automatically annotated from API rID32STR . |
| #68382 | Automatically annotated from API zym . |
| #69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta . |
| #122183 | Collection of Institut Pasteur ; Curators of the CIP; CIP A157 |
| #124043 | Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy . |
| #125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 ) |
| #125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 . |
| #126262 | A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 ) |
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