Shewanella putrefaciens (CCUG 12948)

Name: Shewanella putrefaciens (CCUG 12948)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 142553

Type strain

Culture col. no. CCUG 12948

NCBI tax ID(s) 24

Special Collections CCUG

Links

Shewanella putrefaciens CCUG 12948 is a prokaryote that was isolated from Human wound,finger.

Name and taxonomic classification

SI-ID 56991

CCUG 12948

@ref 20215

Last LPSN update 2025-12-16 10:04:08

Domain Pseudomonadati

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Alteromonadales

Family Shewanellaceae

Genus Shewanella

Species Shewanella putrefaciens

Full scientific name Shewanella putrefaciens (Lee et al. 1981 ex Derby and Hammer 1931) MacDonell and Colwell 1986

Synonyms (1)

Alteromonas putrefaciens

BacDive ID	Other strains from **Shewanella putrefaciens** (60)	Type strain
14054	S. putrefaciens 95, DSM 6067, ATCC 8071, ICPB 352, NCIB 10471, ... (type strain)
14053	S. putrefaciens DSM 1818, ATCC 12099, IAM 1510, NCIB 8786, ...
14055	S. putrefaciens DSM 9451, LMG 2266 t1, NCTC CL256/73
14057	S. putrefaciens DSM 9461, ATCC 8073, IFO 3910, LMG 2369, ...
14058	S. putrefaciens DSM 15988, NCIMB 12202
14059	S. putrefaciens 180, 3353, DSM 50426, ATCC 8072, NCIB 10472
100617	S. putrefaciens STI05050(IMET), W1,
134814	S. putrefaciens CIP 69.30
134830	S. putrefaciens II 1 Ax, CIP 72.4
138495	S. putrefaciens CIP 59.12, NCDO 756, NCIMB 8615
138895	S. putrefaciens CIP 63.53, CCEB 519, JCM 20573, ATCC 19857, ...
141189	S. putrefaciens CCUG 57
141209	S. putrefaciens CCUG 194
141380	S. putrefaciens CCUG 1321
141385	S. putrefaciens CCUG 1327
141642	S. putrefaciens CCUG 4270
141722	S. putrefaciens CCUG 5188
142551	S. putrefaciens CCUG 12946
142552	S. putrefaciens CCUG 12947
142835	S. putrefaciens CCUG 15258
142927	S. putrefaciens CCUG 15766
142931	S. putrefaciens CCUG 15789
142968	S. putrefaciens CCUG 15951
143370	S. putrefaciens CCUG 18762
143436	S. putrefaciens CCUG 19119
144092	S. putrefaciens CCUG 22946
144093	S. putrefaciens CCUG 22948
146923	S. putrefaciens CCUG 32456 B
147235	S. putrefaciens CCUG 33122
148152	S. putrefaciens CCUG 34907
148929	S. putrefaciens CCUG 36599
148930	S. putrefaciens CCUG 36600
148932	S. putrefaciens CCUG 36602
148966	S. putrefaciens CCUG 36653
148967	S. putrefaciens CCUG 36654
157516	S. putrefaciens IMI 349021
162912	S. putrefaciens JCM 20396, IAM 12089, NRRL B-1002
163016	S. putrefaciens JCM 20940, IAM 13595, LMG 2263, NCTC 10737
163017	S. putrefaciens JCM 20941, IAM 13596
163018	S. putrefaciens JCM 20942, CDC A4186, IAM 13597
163019	S. putrefaciens JCM 20943, CDC A4186, IAM 13598
163020	S. putrefaciens JCM 20944, CDC A7191, IAM 13599
163021	S. putrefaciens JCM 20945, CDC A7310, IAM 13600
163022	S. putrefaciens JCM 20946, CDC A7921, IAM 13601
163023	S. putrefaciens JCM 20947, CDC A7921, IAM 13602
163024	S. putrefaciens JCM 20948, CDC B23, IAM 13603
163025	S. putrefaciens JCM 20949, IAM 13604
163026	S. putrefaciens JCM 20950, IAM 13605
163027	S. putrefaciens JCM 20951, IAM 13606
163028	S. putrefaciens JCM 20952, IAM 13607
163029	S. putrefaciens JCM 20953, IAM 13608
163030	S. putrefaciens JCM 20954, IAM 13609
163031	S. putrefaciens JCM 20955, IAM 13610
163032	S. putrefaciens JCM 20956, IAM 13611
163033	S. putrefaciens JCM 20957, IAM 13612
163034	S. putrefaciens JCM 20958, IAM 13613
163035	S. putrefaciens JCM 20960, IAM 13615, NCTC 10762
163036	S. putrefaciens JCM 20961, IAM 13616, LMG 2267, NCTC 10763
163037	S. putrefaciens JCM 20963, IAM 13618
163038	S. putrefaciens JCM 20964, IAM 13619

Morphology

Culture and growth conditions

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	-	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	-	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	-	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	-	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	-	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	-	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	-	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	-	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	-	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
45864	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Human	-
#Host Body-Site	#Other	#Wound
#Host Body-Site	#Limb	#Hand
#Infection	#Patient	-

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
45864	Human wound,finger	USA	USA	North America

Interaction and safety

Sequence information

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Differentiation of Shewanella putrefaciens and Shewanella alga on the basis of whole-cell protein profiles, ribotyping, phenotypic characterization, and 16S rRNA gene sequence analysis.	Vogel BF, Jorgensen K, Christensen H, Olsen JE, Gram L.	Appl Environ Microbiol	10.1128/aem.63.6.2189-2199.1997	1997

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#45864	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 12948
#68369	Automatically annotated from API 20NE .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Shewanella putrefaciens (CCUG 12948)

Name and taxonomic classification

Morphology

Culture and growth conditions

Physiology and metabolism

Metabolite utilization

Metabolite production

Metabolite tests

Enzymes

API 20NE

Isolation, sampling and environmental information

Isolation source categories

Isolation

Interaction and safety

Sequence information

Genome-based predictions

Literature

Literature

References

BacDive

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