Vibrio cholerae (CIP 106855, ATCC 39315, N16961)

Name: Vibrio cholerae (CIP 106855, ATCC 39315, N16961)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 139519

Type strain

Strain Designation N16961

Culture col. no. CIP 106855 ATCC 39315 N16961

NCBI tax ID(s) 666

Special Collections CIP

History CIP <- 2000, J.B. Kaper, Maryland Univ., Baltimore, Maryland, USA: strain N16961 <- J. Craig <- Cholera Res. Lab., Bangladesh

Links

Vibrio cholerae N16961 is a facultative anaerobe, Gram-negative, motile bacterium of the family Vibrionaceae.

Gram-negative motile rod-shaped facultative anaerobe Bacteria

Name and taxonomic classification

SI-ID 41492

ATCC 39315,CIP 106855

@ref 20215

Last LPSN update 2026-05-29 08:39:31

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order "Vibrionales"

Family Vibrionaceae

Genus Vibrio

Species Vibrio cholerae

Full scientific name Vibrio cholerae Pacini 1854 (Approved Lists 1980)

Synonyms (1)

Vibrio albensis

BacDive ID	Other strains from **Vibrio cholerae** (116)	Type strain
130763	V. cholerae strain 3, J4308, 3, CCUG 9118 A, DSM 100200, ... (type strain)
131086	V. cholerae VL 3029, DSM 101014, NCTC 11348, WDCM 00136, ...
134413	V. cholerae Ez 5cp, CIP 56.39
134434	V. cholerae 35A3, CIP A269
134436	V. cholerae Eu5, CIP 56.38
134437	V. cholerae N16961 Smr, CIP 106851
134439	V. cholerae 2830, CIP 106970
134443	V. cholerae AI1853, CIP 104152
134445	V. cholerae AE17504, CIP 104153
134769	V. cholerae O1, CIP 62.14
134770	V. cholerae O14, CIP 62.16
134771	V. cholerae O9, CIP 62.15
134871	V. cholerae B2 (Berne 2), CIP A256
135756	V. cholerae 4Z, CIP 55.91, ATCC 11623, NCTC 8367
135777	V. cholerae CIP 69.41, ATCC 14547, NCIMB 41, CCUG 48664, ...
135898	V. cholerae AC7535, CIP 104154
136198	V. cholerae Makassar 757, CIP 66.2
136572	V. cholerae 182, CIP 106971
136573	V. cholerae 2829, CIP 106969
136586	V. cholerae 723, CIP 106920
136888	V. cholerae MDO19, CIP 104151
137123	V. cholerae CIP 68.10
137402	V. cholerae 335, CIP 106974
137778	V. cholerae 254, CIP 106972
138905	V. cholerae HK1, CIP 63.32
139031	V. cholerae 940041, 569B, CIP 105882
139458	V. cholerae CIP 63.40, ATCC 14730, NCTC 4711
139869	V. cholerae A1552, DSM 106276
141274	V. cholerae CCUG 537, ATCC 14733, NCTC 8042, CIP 63.42, ...
141524	V. cholerae CCUG 2569
141525	V. cholerae CCUG 2572
141526	V. cholerae CCUG 2573
141628	V. cholerae CCUG 4070
141968	V. cholerae CCUG 9119, ATCC 14034, NCTC 7254
141969	V. cholerae CCUG 9120, NCTC 7270
141970	V. cholerae CCUG 9121, NCTC 8041
141971	V. cholerae CCUG 9122, ATCC 15748, NCTC 3661
141974	V. cholerae CCUG 9193
141975	V. cholerae CCUG 9194
141976	V. cholerae CCUG 9195
141977	V. cholerae CCUG 9196
141978	V. cholerae CCUG 9197
141979	V. cholerae CCUG 9198
142575	V. cholerae CCUG 13118
142576	V. cholerae CCUG 13119
142577	V. cholerae CCUG 13120
142578	V. cholerae CCUG 13121
142579	V. cholerae CCUG 13122
142580	V. cholerae CCUG 13123
142581	V. cholerae CCUG 13124
142582	V. cholerae CCUG 13125
142768	V. cholerae CCUG 14542
142947	V. cholerae CCUG 15858
143054	V. cholerae CCUG 16570
143055	V. cholerae CCUG 16571
143277	V. cholerae CCUG 18208 A
143427	V. cholerae CCUG 19100
143428	V. cholerae CCUG 19101
143429	V. cholerae CCUG 19102
143443	V. cholerae CCUG 19149
143444	V. cholerae CCUG 19153
143471	V. cholerae CCUG 19445
143551	V. cholerae CCUG 20047
143552	V. cholerae CCUG 20048
143577	V. cholerae CCUG 20308, ATCC 2587
143854	V. cholerae CCUG 21589
143874	V. cholerae CCUG 21688
143875	V. cholerae CCUG 21691
146832	V. cholerae CCUG 32198
147329	V. cholerae CCUG 33379
147381	V. cholerae CCUG 33493
147699	V. cholerae CCUG 34033
148001	V. cholerae CCUG 34649
148028	V. cholerae CCUG 34707, ATCC 51394
148029	V. cholerae CCUG 34708
148949	V. cholerae CCUG 36627
149332	V. cholerae CCUG 37531
149707	V. cholerae CCUG 38251
150362	V. cholerae CCUG 39732
150363	V. cholerae CCUG 39733
150508	V. cholerae CCUG 41448
150672	V. cholerae CCUG 41930
150696	V. cholerae CCUG 41979
150821	V. cholerae CCUG 42464
150832	V. cholerae CCUG 42513
150833	V. cholerae CCUG 42514
150838	V. cholerae CCUG 42534
150854	V. cholerae CCUG 42568
151014	V. cholerae CCUG 43040
151016	V. cholerae CCUG 43042
151285	V. cholerae CCUG 43612
151286	V. cholerae CCUG 43617
151288	V. cholerae CCUG 43628
151310	V. cholerae CCUG 43715
151339	V. cholerae CCUG 43794
151680	V. cholerae CCUG 44618
151700	V. cholerae CCUG 44668
151964	V. cholerae CCUG 45388
151966	V. cholerae CCUG 45390
151968	V. cholerae CCUG 45392
152507	V. cholerae CCUG 46968
152588	V. cholerae CCUG 47153
152715	V. cholerae CCUG 47460
152716	V. cholerae CCUG 47461
153518	V. cholerae CCUG 50018
153801	V. cholerae CCUG 50999
153915	V. cholerae CCUG 51600
154009	V. cholerae CCUG 51963
154463	V. cholerae CCUG 53724
154464	V. cholerae CCUG 53725
154509	V. cholerae CCUG 53967
155197	V. cholerae CCUG 56875
155407	V. cholerae CCUG 57635
155559	V. cholerae CCUG 58152
156054	V. cholerae CCUG 60231
156860	V. cholerae CCUG 66155

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility
41792	negative	rod-shaped

Culture and growth conditions

Culture medium

@ref	Name	Growth	Composition	Medium link
41792	MEDIUM 72- for trypto casein soja agar		Distilled water make up to (1000.000 ml);Trypto casein soy agar (40.000 g)
41792	CIP Medium 72			Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
41792	positive	growth	30
41792	positive	growth	15-41
41792	negative	growth	5

Physiology and metabolism

Oxygen tolerance

41792

Oxygen tolerancefacultative anaerobe

Halophily

@ref	Salt	Growth	Tested relation	Concentration
41792	NaCl	positive	growth	0-6 %
41792	NaCl		growth	8 %
41792	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
41792	16947 ChEBI	citrate	+	carbon source
41792	4853 ChEBI	esculin	-	hydrolysis
41792	17234 ChEBI	glucose	+	fermentation
41792	17234 ChEBI	glucose	+	degradation
41792	17716 ChEBI	lactose	-	fermentation
41792	17632 ChEBI	nitrate	+	reduction
41792	17632 ChEBI	nitrate	+	respiration
41792	16301 ChEBI	nitrite	-	reduction
41792	132112 ChEBI	sodium thiosulfate	-	builds gas from

Antibiotic resistance

@ref	Metabolite	Is sensitive	Is resistant
41792	0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)

Metabolite production

@ref	Chebi-ID	Metabolite	Production
41792	35581 ChEBI	indole

Metabolite tests

@ref	Chebi-ID	Metabolite	Voges-proskauer-test	Methylred-test
41792	15688 ChEBI	acetoin	+
41792	17234 ChEBI	glucose		+

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	-	3.1.3.2	from API zym
41792	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	-	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
41792	amylase	+
41792	beta-galactosidase	+	3.2.1.23
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
41792	caseinase	+	3.4.21.50
41792	catalase	+	1.11.1.6
68382	cystine arylamidase	-	3.4.11.3	from API zym
41792	DNase	+
68382	esterase (C 4)	-		from API zym
68382	esterase lipase (C 8)	-		from API zym
41792	gamma-glutamyltransferase	+	2.3.2.2
41792	gelatinase	+
41792	lecithinase	+
68382	leucine arylamidase	-	3.4.11.1	from API zym
41792	lipase	+
68382	lipase (C 14)	-		from API zym
41792	lysine decarboxylase	+	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	-		from API zym
41792	ornithine decarboxylase	+	4.1.1.17
41792	oxidase	+
41792	phenylalanine ammonia-lyase	-	4.3.1.24
41792	protease	+
68382	trypsin	-	3.4.21.4	from API zym
41792	tryptophan deaminase	+
41792	tween esterase	+
41792	urease	-	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
41792	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
41792	not determinedn.d.	+	+	+	+	+	-	-	+	-	+	+	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	+	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	+	+	-	-	+	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	+	-	-	-	+	-	-	+	+	+	+	-	+	-	-	+	+

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species	Country	Country ISO 3 Code	Continent	Isolation date
41792			Bangladesh	BGD	Asia
41792	Human, Stool	Homo sapiens	Bangladesh	BGD	Asia	1975

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
41792	2	Risk group (French classification)

Sequence information

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Transcriptome	Expansion of the SOS regulon of Vibrio cholerae through extensive transcriptome analysis and experimental validation.	Krin E, Pierle SA, Sismeiro O, Jagla B, Dillies MA, Varet H, Irazoki O, Campoy S, Rouy Z, Cruveiller S, Medigue C, Coppee JY, Mazel D.	BMC Genomics	10.1186/s12864-018-4716-8	2018
Phylogeny	Detection of Vibrio cholerae by real-time nucleic acid sequence-based amplification.	Fykse EM, Skogan G, Davies W, Olsen JS, Blatny JM.	Appl Environ Microbiol	10.1128/aem.01635-06	2007
Pathogenicity	Structure-activity relationship of cinnamaldehyde analogs as inhibitors of AI-2 based quorum sensing and their effect on virulence of Vibrio spp.	Brackman G, Celen S, Hillaert U, Van Calenbergh S, Cos P, Maes L, Nelis HJ, Coenye T.	PLoS One	10.1371/journal.pone.0016084	2011
	The role of morphological adaptability in Vibrio cholerae's motility.	Xu J, Abe K, Kodama T, Sultana M, Chac D, Markiewicz SM, Matsunami H, Kuba E, Tsunoda S, Alam M, Weil AA, Nakamura S, Yamashiro T.	mBio	10.1128/mbio.02469-24	2025
Pathogenicity	Broken beyond repair: TA system ParE toxins mediate effective gyrase inhibition without driving resistance.	Tu C-H, Ruan S, Holt M, Bourne CR.	J Bacteriol	10.1128/jb.00416-24	2025
	IgY-mediated protection against Vibrio cholerae infection: Efficacy of avian antibodies targeting a chimeric recombinant protein.	Naghash Hoseini HS, Ahmadi TS, Mousavi Gargari SL, Nazarian S.	Bioimpacts	10.34172/bi.30292	2025
	Comprehensive in silico analyses of fifty-one uncharacterized proteins from Vibrio cholerae.	Basu Mallick S, Das S, Venkatasubramanian A, Kundu S, Datta PP.	PLoS One	10.1371/journal.pone.0311301	2024
	Rapid Colorimetric Quantita2tive Portable Platform for Detection of Brucella melitensis Based on a Fluorescence Resonance Energy Transfer Assay and Nanomagnetic Particles.	Alhogail S, Chinnappan R, Suaifan GARY, Abu-Salah KM, Al-Kattan K, Cialla-May D, Jurgen P, Zourob MM.	ACS Omega	10.1021/acsomega.4c00192	2024
	Outer membrane vesicles and the outer membrane protein OmpU govern Vibrio cholerae biofilm matrix assembly.	Potapova A, Garvey W, Dahl P, Guo S, Chang Y, Schwechheimer C, Trebino MA, Floyd KA, Phinney BS, Liu J, Malvankar NS, Yildiz FH.	mBio	10.1128/mbio.03304-23	2024
	Size controlled biosynthesis of silver nanoparticles using Ophiorrhiza mungos, Ophiorrhiza harrisiana and Ophiorrhiza rugosa aqueous leaf extract and their antimicrobial activity.	Ganguli S, Howlader S, Ullah AKMA, Bhuiyan FR, Akhi AA, Hasan A, Dey K, Islam S, Ali F, Chakraborty AK, Bhattacharjee S, Dey BK.	Heliyon	10.1016/j.heliyon.2023.e16072	2023
	Design and computational analysis of an effective multi-epitope vaccine candidate using subunit B of cholera toxin as a build-in adjuvant against urinary tract infections.	Rezaei M, Habibi M, Ehsani P, Asadi Karam MR, Bouzari S.	Bioimpacts	10.34172/bi.2023.27513	2024
	Enteric Pathogens Risk Factors Associated with Household Drinking Water: A Case Study in Ugu District Kwa-Zulu Natal Province, South Africa.	Khabo-Mmekoa CM, Genthe B, Momba MNB.	Int J Environ Res Public Health	10.3390/ijerph19084431	2022
	Antigenic sites in SARS-CoV-2 spike RBD show molecular similarity with pathogenic antigenic determinants and harbors peptides for vaccine development.	Dakal TC.	Immunobiology	10.1016/j.imbio.2021.152091	2021
	Metabolic Responses, Uptake, and Export of Copper in Cyanobacteria.	Oder JC, Sateles TE, de Souza LB, Nunes-Nesi A, Araujo WL, Alvarenga-Lucius L.	Biology (Basel)	10.3390/biology14070798	2025
Genetics	Vibrio Phage VMJ710 Can Prevent and Treat Disease Caused by Pathogenic MDR V. cholerae O1 in an Infant Mouse Model.	Chaudhary N, Mohan B, Kaur H, Modgil V, Kant V, Bhatia A, Taneja N.	Antibiotics (Basel)	10.3390/antibiotics12061046	2023
	Development of Multienzyme Isothermal Rapid Amplification (MIRA) Combined with Lateral-Flow Dipstick (LFD) Assay to Detect Species-Specific tlh and Pathogenic trh and tdh Genes of Vibrio parahaemolyticus.	Park SB, Zhang Y.	Pathogens	10.3390/pathogens13010057	2024
Metabolism	Engineered MATE multidrug transporters reveal two functionally distinct ion-coupling pathways in NorM from Vibrio cholerae.	Raturi S, Nair AV, Shinoda K, Singh H, Bai B, Murakami S, Fujitani H, van Veen HW.	Commun Biol	10.1038/s42003-021-02081-6	2021
Metabolism	A dual-function RNA balances carbon uptake and central metabolism in Vibrio cholerae.	Venkat K, Hoyos M, Haycocks JR, Cassidy L, Engelmann B, Rolle-Kampczyk U, von Bergen M, Tholey A, Grainger DC, Papenfort K.	EMBO J	10.15252/embj.2021108542	2021
	Plesiomonas shigelloides, an Atypical Enterobacterales with a Vibrio-Related Secondary Chromosome.	Adam Y, Brezellec P, Espinosa E, Besombes A, Naquin D, Paly E, Possoz C, van Dijk E, Barre FX, Ferat JL.	Genome Biol Evol	10.1093/gbe/evac011	2022
	Secreted Aeromonas GlcNAc binding protein GbpA stimulates epithelial cell proliferation in the zebrafish intestine.	Banse AV, VanBeuge S, Smith TJ, Logan SL, Guillemin K.	Gut Microbes	10.1080/19490976.2023.2183686	2023
Phylogeny	A Novel Inovirus Reprograms Metabolism and Motility of Marine Alteromonas.	Jia K, Peng Y, Chen X, Jian H, Jin M, Yi Z, Su M, Dong X, Yi M.	Microbiol Spectr	10.1128/spectrum.03388-22	2022
	Synthetic peptides mimicking lipopolysaccharide as a potential vaccine candidates against Vibrio cholerae serogroup O1.	Ghazi FMP, Gargari SLM.	Iran J Microbiol		2017
	SspABCD-SspFGH Constitutes a New Type of DNA Phosphorothioate-Based Bacterial Defense System.	Wang S, Wan M, Huang R, Zhang Y, Xie Y, Wei Y, Ahmad M, Wu D, Hong Y, Deng Z, Chen S, Li Z, Wang L.	mBio	10.1128/mbio.00613-21	2021
Phylogeny	Nontoxigenic Vibrio cholerae non-O1/O139 isolate from a case of human gastroenteritis in the U.S. Gulf Coast.	Hasan NA, Rezayat T, Blatz PJ, Choi SY, Griffitt KJ, Rashed SM, Huq A, Conger NG, Colwell RR, Grimes DJ.	J Clin Microbiol	10.1128/jcm.02187-14	2015
	Different Inhibitory Potencies of Oseltamivir Carboxylate, Zanamivir, and Several Tannins on Bacterial and Viral Neuraminidases as Assessed in a Cell-Free Fluorescence-Based Enzyme Inhibition Assay.	Quosdorf S, Schuetz A, Kolodziej H.	Molecules	10.3390/molecules22111989	2017
	Antimicrobial Susceptibility among Urban Wastewater and Wild Shellfish Isolates of Non-O1/Non-O139 Vibrio cholerae from La Rance Estuary (Brittany, France).	Baron S, Larvor E, Chevalier S, Jouy E, Kempf I, Granier SA, Lesne J.	Front Microbiol	10.3389/fmicb.2017.01637	2017
Metabolism	Vibrio cholerae O1 secretes an extracellular matrix in response to antibody-mediated agglutination.	Baranova DE, Levinson KJ, Mantis NJ.	PLoS One	10.1371/journal.pone.0190026	2018
	Environmental vibrios represent a source of antagonistic compounds that inhibit pathogenic Vibrio cholerae and Vibrio parahaemolyticus strains.	Burks DJ, Norris S, Kauffman KM, Joy A, Arevalo P, Azad RK, Wildschutte H.	Microbiologyopen	10.1002/mbo3.504	2017
	Isolation and detection of a KDEL-tagged recombinant cholera toxin B subunit from Nicotiana benthamiana.	Morris DA, Reeves MA, Royal JM, Hamorsky KT, Matoba N.	Process Biochem	10.1016/j.procbio.2020.10.018	2021
Enzymology	Study of the DnaB:DciA interplay reveals insights into the primary mode of loading of the bacterial replicative helicase.	Marsin S, Adam Y, Cargemel C, Andreani J, Baconnais S, Legrand P, Li de la Sierra-Gallay I, Humbert A, Aumont-Nicaise M, Velours C, Ochsenbein F, Durand D, Le Cam E, Walbott H, Possoz C, Quevillon-Cheruel S, Ferat JL.	Nucleic Acids Res	10.1093/nar/gkab463	2021
	Hypericum Essential Oils-Composition and Bioactivities: An Update (2012-2022).	Grafakou ME, Barda C, Karikas GA, Skaltsa H.	Molecules	10.3390/molecules27165246	2022
	Aptamers and Aptamer-Coupled Biosensors to Detect Water-Borne Pathogens.	Saad M, Faucher SP.	Front Microbiol	10.3389/fmicb.2021.643797	2021
Enzymology	Non-Invasive Colorimetric Magneto Loop-Mediated Isothermal Amplification (CM-LAMP) Method for Helicobacter pylori Detection.	Bangpanwimon K, Mittraparp-Arthorn P, Srinitiwarawong K, Tansila N.	J Microbiol Biotechnol	10.4014/jmb.2101.01008	2021
Metabolism	Abundance of bacterial Type VI secretion system components measured by targeted proteomics.	Lin L, Lezan E, Schmidt A, Basler M.	Nat Commun	10.1038/s41467-019-10466-9	2019
Genetics	Genomic diversity of Vibrio spp. and metagenomic analysis of pathogens in Florida Gulf coastal waters following Hurricane Ian.	Brumfield KD, Usmani M, Santiago S, Singh K, Gangwar M, Hasan NA, Netherland M, Deliz K, Angelini C, Beatty NL, Huq A, Jutla AS, Colwell RR.	mBio	10.1128/mbio.01476-23	2023
Phylogeny	OmpU as a biomarker for rapid discrimination between toxigenic and epidemic Vibrio cholerae O1/O139 and non-epidemic Vibrio cholerae in a modified MALDI-TOF MS assay.	Paauw A, Trip H, Niemcewicz M, Sellek R, Heng JM, Mars-Groenendijk RH, de Jong AL, Majchrzykiewicz-Koehorst JA, Olsen JS, Tsivtsivadze E.	BMC Microbiol	10.1186/1471-2180-14-158	2014
Metabolism	Escherichia coli enoyl-acyl carrier protein reductase (FabI) supports efficient operation of a functional reversal of beta-oxidation cycle.	Vick JE, Clomburg JM, Blankschien MD, Chou A, Chou A, Kim S, Gonzalez R.	Appl Environ Microbiol	10.1128/aem.03521-14	2015
Enzymology	Characterization of a Metal-Resistant Bacillus Strain With a High Molybdate Affinity ModA From Contaminated Sediments at the Oak Ridge Reservation.	Ge X, Thorgersen MP, Poole FL, Deutschbauer AM, Chandonia JM, Novichkov PS, Gushgari-Doyle S, Lui LM, Nielsen T, Chakraborty R, Adams PD, Arkin AP, Hazen TC, Adams MWW.	Front Microbiol	10.3389/fmicb.2020.587127	2020
	Resveratrol-Potential Antibacterial Agent against Foodborne Pathogens.	Ma DSL, Tan LT, Chan KG, Yap WH, Pusparajah P, Chuah LH, Ming LC, Khan TM, Lee LH, Goh BH.	Front Pharmacol	10.3389/fphar.2018.00102	2018
	Evaluation of the cytotoxic effect and antibacterial, antifungal, and antiviral activities of Hypericum triquetrifolium Turra essential oils from Tunisia.	Rouis Z, Abid N, Koudja S, Yangui T, Elaissi A, Cioni PL, Flamini G, Aouni M.	BMC Complement Altern Med	10.1186/1472-6882-13-24	2013
	In Silico Analysis of the cadF Gene and Development of a Duplex Polymerase Chain Reaction for Species-Specific Identification of Campylobacter jejuni and Campylobacter coli.	Shams S, Bakhshi B, Tohidi Moghadam T.	Jundishapur J Microbiol	10.5812/jjm.29645	2016
Metabolism	Chemoproteomic profiling of host and pathogen enzymes active in cholera.	Hatzios SK, Abel S, Martell J, Hubbard T, Sasabe J, Munera D, Clark L, Bachovchin DA, Qadri F, Ryan ET, Davis BM, Weerapana E, Waldor MK.	Nat Chem Biol	10.1038/nchembio.2025	2016
Metabolism	D-alanine modification of a protease-susceptible outer membrane component by the Bordetella pertussis dra locus promotes resistance to antimicrobial peptides and polymorphonuclear leukocyte-mediated killing.	Taneja NK, Ganguly T, Bakaletz LO, Nelson KJ, Dubey P, Poole LB, Deora R.	J Bacteriol	10.1128/jb.00510-13	2013
	Genetic analysis of the CDI pathway from Burkholderia pseudomallei 1026b.	Koskiniemi S, Garza-Sanchez F, Edman N, Chaudhuri S, Poole SJ, Manoil C, Hayes CS, Low DA.	PLoS One	10.1371/journal.pone.0120265	2015
	Saharan dust nutrients promote Vibrio bloom formation in marine surface waters.	Westrich JR, Ebling AM, Landing WM, Joyner JL, Kemp KM, Griffin DW, Lipp EK.	Proc Natl Acad Sci U S A	10.1073/pnas.1518080113	2016
	Assessment and verification of commercially available pressure cookers for laboratory sterilization.	Swenson VA, Stacy AD, Gaylor MO, Ushijima B, Philmus B, Cozy LM, Videau NM, Videau P.	PLoS One	10.1371/journal.pone.0208769	2018
Metabolism	Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.	Matsuyama BY, Krasteva PV, Baraquet C, Harwood CS, Sondermann H, Navarro MV.	Proc Natl Acad Sci U S A	10.1073/pnas.1523148113	2016
	High depth, whole-genome sequencing of cholera isolates from Haiti and the Dominican Republic.	Sealfon R, Gire S, Ellis C, Calderwood S, Qadri F, Hensley L, Kellis M, Ryan ET, LaRocque RC, Harris JB, Sabeti PC.	BMC Genomics	10.1186/1471-2164-13-468	2012
Biotechnology	Diagnostic microarray for 14 water and foodborne pathogens using a flatbed scanner.	Srinivasan V, Stedtfeld RD, Tourlousse DM, Baushke SW, Xin Y, Miller SM, Pham T, Rouillard JM, Gulari E, Tiedje JM, Hashsham SA.	J Microbiol Methods	10.1016/j.mimet.2017.04.009	2017
Metabolism	Dissecting the bacterial type VI secretion system by a genome wide in silico analysis: what can be learned from available microbial genomic resources?	Boyer F, Fichant G, Berthod J, Vandenbrouck Y, Attree I.	BMC Genomics	10.1186/1471-2164-10-104	2009
	rrndb: the Ribosomal RNA Operon Copy Number Database.	Klappenbach JA, Saxman PR, Cole JR, Schmidt TM.	Nucleic Acids Res	10.1093/nar/29.1.181	2001
Phylogeny	Rapid method for species-specific identification of Vibrio cholerae using primers targeted to the gene of outer membrane protein OmpW.	Nandi B, Nandy RK, Mukhopadhyay S, Nair GB, Shimada T, Ghose AC.	J Clin Microbiol	10.1128/jcm.38.11.4145-4151.2000	2000
Metabolism	Application of isothermal helicase-dependent amplification with a disposable detection device in a simple sensitive stool test for toxigenic Clostridium difficile.	Chow WH, McCloskey C, Tong Y, Hu L, You Q, Kelly CP, Kong H, Tang YW, Tang W.	J Mol Diagn	10.2353/jmoldx.2008.080008	2008
Metabolism	Aryl acid adenylating enzymes involved in siderophore biosynthesis: fluorescence polarization assay, ligand specificity, and discovery of non-nucleoside inhibitors via high-throughput screening.	Neres J, Wilson DJ, Celia L, Beck BJ, Aldrich CC.	Biochemistry	10.1021/bi801625b	2008
Enzymology	Static self-directed sample dispensing into a series of reaction wells on a microfluidic card for parallel genetic detection of microbial pathogens.	Stedtfeld RD, Liu YC, Stedtfeld TM, Kostic T, Kronlein M, Srivannavit O, Khalife WT, Tiedje JM, Gulari E, Hughes M, Etchebarne B, Hashsham SA.	Biomed Microdevices	10.1007/s10544-015-9994-1	2015
Enzymology	In situ-synthesized virulence and marker gene biochip for detection of bacterial pathogens in water.	Miller SM, Tourlousse DM, Stedtfeld RD, Baushke SW, Herzog AB, Wick LM, Rouillard JM, Gulari E, Tiedje JM, Hashsham SA.	Appl Environ Microbiol	10.1128/aem.01962-07	2008
	Comparing the similarity of different groups of bacteria to the human proteome.	Trost B, Pajon R, Jayaprakash T, Kusalik A.	PLoS One	10.1371/journal.pone.0034007	2012
	Rates and consequences of recombination between rRNA operons.	Hashimoto JG, Stevenson BS, Schmidt TM.	J Bacteriol	10.1128/jb.185.3.966-972.2003	2003
Enzymology	BactQuant: an enhanced broad-coverage bacterial quantitative real-time PCR assay.	Liu CM, Aziz M, Kachur S, Hsueh PR, Huang YT, Keim P, Price LB.	BMC Microbiol	10.1186/1471-2180-12-56	2012
Phylogeny	Diversity and dynamics of a north atlantic coastal Vibrio community.	Thompson JR, Randa MA, Marcelino LA, Tomita-Mitchell A, Lim E, Polz MF, Polz MF.	Appl Environ Microbiol	10.1128/aem.70.7.4103-4110.2004	2004
Metabolism	A bifunctional enzyme in a single gene catalyzes the incorporation of GlcN into the Aeromonas core lipopolysaccharide.	Jimenez N, Vilches S, Lacasta A, Regue M, Merino S, Tomas JM.	J Biol Chem	10.1074/jbc.m109.038828	2009
	Aptamer-nanobody based ELASA for detection of Vibrio cholerae O1.	Mojarad AE, Gargaria SLM	Iran J Microbiol	10.18502/ijm.v12i4.3928	2020
Pathogenicity	gbpA as a Novel qPCR Target for the Species-Specific Detection of Vibrio cholerae O1, O139, Non-O1/Non-O139 in Environmental, Stool, and Historical Continuous Plankton Recorder Samples.	Vezzulli L, Stauder M, Grande C, Pezzati E, Verheye HM, Owens NJ, Pruzzo C	PLoS One	10.1371/journal.pone.0123983	2015

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#41792	Collection of Institut Pasteur ; Curators of the CIP; CIP 106855
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Vibrio cholerae (CIP 106855, ATCC 39315, N16961)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Halophily

Metabolite utilization

Antibiotic resistance

Metabolite production

Metabolite tests

Enzymes

API zym

API biotype100

Isolation, sampling and environmental information

Isolation

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Risk assessment

Sequence information

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