Name: Actinokineospora soli DSM 45613
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 13210

Type strain:

Species: Actinokineospora soli

Culture col. no.: DSM 45613, JCM 17695, YIM 75948, NBRC 111522

Strain history: S.-K. Tang YIM 75948.

NCBI tax ID(s): 1048753 (species)

SI-ID 405621

DSM 45613

Special Collections

Section

Actinokineospora soli DSM 45613 is an aerobe, spore-forming, Gram-positive bacterium that was isolated from soil.

Gram-positive
spore-forming
aerobe
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Actinokineospora*
	Species	**Actinokineospora soli**
	Full Scientific Name (LPSN)	Actinokineospora soli Tang et al. 2012

Information on morphological and physiological properties Morphology

[Ref.: #30427]	Gram stain	positive

[Ref.: #30427]	Motility	no

[Ref.: #30427]

Pigment production

yes

Information on culture and growth conditions Culture and growth conditions

[Ref.: #17765]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #17765]

Culture medium growth

[Ref.: #17765]

Culture medium link

Medium recipe at MediaDive

[Ref.: #17765]

Culture medium composition

expand / minimize

		Temperature
[Ref.: #17765]	growth	28 °C
[Ref.: #30427]	growth	25-55 °C
[Ref.: #30427]	optimum	37 °C
[Ref.: #67770]	growth	37 °C

	pH	Kind of pH		pH
[Ref.: #30427]			optimum	8
[Ref.: #30427]			growth	07-09

Information on physiology and metabolism Physiology and metabolism

[Ref.: #30427]

Oxygen tolerance

aerobe

[Ref.: #30427]

Ability of spore formation

yes

	Halophily	Salt	Tested relation		Salt conc.
[Ref.: #30427]		NaCl		growth	0-5	%
[Ref.: #30427]		NaCl		optimum	1	%

[Ref.: #67770]

Observation

quinones: MK-9(H₄)

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #30427]	cellobiose ChEBI	+	carbon source
[Ref.: #30427]	galactose ChEBI	+	carbon source
[Ref.: #30427]	glucose ChEBI	+	carbon source
[Ref.: #30427]	maltose ChEBI	+	carbon source
[Ref.: #30427]	mannitol ChEBI	+	carbon source
[Ref.: #30427]	mannose ChEBI	+	carbon source
[Ref.: #30427]	sucrose ChEBI	+	carbon source
[Ref.: #30427]	xylitol ChEBI	+	carbon source

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #30427]		catalase	+	1.11.1.6
[Ref.: #30427]		gelatinase	+

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #17765]	Sample type/isolated from	soil
[Ref.: #17765]	Geographic location (country and/or sea, region)	Yunnan province
[Ref.: #17765]	Country	China
[Ref.: #17765]	Country ISO 3 Code	CHN
[Ref.: #17765]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Yunnan Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence JN188939 (>99% sequence identity) for Actinokineospora from Microbeatlas

Aquatic Samples	2
Soil Samples	19
Animal Samples	24
Plant Samples	15
Total Samples	60

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #17765]

Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #17765]	Actinokineospora soli strain YIM 75948 16S ribosomal RNA gene, partial sequence	JN005785	1477	GenBank ENA	1048753 tax ID
[Ref.: #20218]	Actinokineospora soli strain YIM 75948 16S ribosomal RNA gene, partial sequence	JN188939	1477	GenBank ENA	1048753 tax ID	*

[Ref.: #17765]	GC-content	73.8 mol%	high performance liquid chromatography (HPLC)
[Ref.: #30427]	GC-content	73.8 mol%

Availability in culture collections External links

[Ref.: #17765]

Culture collection no.

DSM 45613, JCM 17695, YIM 75948, NBRC 111522

[Ref.: #82418]

SI-ID 405621

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Actinokineospora acnipugnans sp. nov., an actinomycete isolated from soil, showing potential uses in cosmetics.	Dahal RH, Shim DS, Kim J	Int J Syst Evol Microbiol	10.1099/ijsem.0.002078	2017	*
Phylogeny	Actinokineospora guangxiensis sp. nov., isolated from soil.	Wu H, Liu B	Int J Syst Evol Microbiol	10.1099/ijsem.0.000627	2015	*
Phylogeny	Actinokineospora soli sp. nov., a thermotolerant actinomycete isolated from soil, and emended description of the genus Actinokineospora.	Tang X, Zhou Y, Zhang J, Ming H, Nie GX, Yang LL, Tang SK, Li WJ	Int J Syst Evol Microbiol	10.1099/ijs.0.035832-0	2011	*

References

#17765

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 45613

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#30427

Barberan A, Caceres Velazquez H, Jones S, Fierer N.: Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information. mSphere 2: 2017 ( DOI 10.1128/mSphere.00237-17 , PubMed 28776041 ) - originally annotated from #26763 (see below)

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#82418

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID405621.1 )

#26763

IJSEM 1845 2012 ( DOI 10.1099/ijs.0.035832-0 , PubMed 21984679 )

* These data were automatically processed and therefore are not curated

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