Actinoalloteichus caeruleus Y388=As 4.1159, Y-388 | Type strain | DSM 43889, IFO 14455, IMET 43868, JCM 6095, NBRC 14455, NRRL B-16252, CGMCC 4.1159, CIP 106755, KCCM 12121, VKM Ac-1271, AS 4.1159 | BacDiveID:13192

Strain identifier

BacDive ID: 13192

Type strain:

Species: Actinoalloteichus caeruleus

Strain Designation: Y388=As 4.1159, Y-388

Culture col. no.: DSM 43889, IFO 14455, IMET 43868, JCM 6095, NBRC 14455, NRRL B-16252, CGMCC 4.1159, CIP 106755, KCCM 12121, VKM Ac-1271, AS 4.1159

Strain history: CIP <- 2000, IFO <- T. Tamura: strain AS 4.1159 <- Z.H. Liu, IMAS: strain Y-388

NCBI tax ID(s): 2893586 (species)

SI-ID 297066

CIP 106755, VKM Ac-1271, IFO 14455, IMET 43868, NRRL B-16252, DSM 43889, JCM 6095, AS 4.1159, NBRC 14455, CGMCC 4.1159

Special Collections

Section

Actinoalloteichus caeruleus Y388=As 4.1159 is an obligate aerobe, spore-forming, Gram-positive bacterium that was isolated from soil.

Gram-positive
spore-forming
obligate aerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Actinoalloteichus*
	Species	**Actinoalloteichus caeruleus**
	Full Scientific Name (LPSN)	Actinoalloteichus caeruleus (Baldacci 1944) Teo et al. 2021

	Synonym	"Actinomyces* caeruleus"*
	Synonym	Actinoalloteichus cyanogriseus
	Synonym	Streptomyces caeruleus

Information on morphological and physiological properties Morphology

[Ref.: #118827]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %91.608

[Ref.: #118827]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %91.082

Multimedia content

Caption:

Medium 535 28°C

Intellectual property rights:

© Leibniz-Institut DSMZ

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Caption:

electron microscopic image

Intellectual property rights:

© HZI/Manfred Rohde

Information on culture and growth conditions Culture and growth conditions

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

Culture medium growth

Culture medium link

Medium recipe at MediaDive

Culture medium composition

expand / minimize

Culture medium

MEDIUM 366 - for Actinoalloteichus cyanogriseus

Culture medium growth

Culture medium composition

expand / minimize

[Ref.: #118827]

Culture medium

CIP Medium 366

[Ref.: #118827]

Culture medium growth

[Ref.: #118827]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #11368]			growth	28 °C
[Ref.: #39572]			growth	30 °C
[Ref.: #67770]			growth	28 °C
[Ref.: #118827]			growth	25-41 °C
[Ref.: #118827]		no	growth	10 °C
[Ref.: #118827]		no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #118827]	Oxygen tolerance	obligate aerobe
[Ref.: #69480]	Oxygen tolerance	aerobe Confidence in %90.39

Ability of spore formation

yes Confidence in %99

Observation

quinones: MK-9(H₄)

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68369]		arginine ChEBI	-	hydrolysis	* from API 20NE
[Ref.: #68369]		D-glucose ChEBI	-	fermentation	* from API 20NE
[Ref.: #68369]		D-mannitol ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]		decanoate ChEBI	-	assimilation	* from API 20NE
[Ref.: #118827]		esculin ChEBI	-	hydrolysis
[Ref.: #68369]		esculin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68369]		gelatin ChEBI	+	hydrolysis	* from API 20NE
[Ref.: #68369]		gluconate ChEBI	+	assimilation	* from API 20NE
[Ref.: #118827]		hippurate ChEBI	+	hydrolysis
[Ref.: #68369]		malate ChEBI	+	assimilation	* from API 20NE
[Ref.: #68369]		maltose ChEBI	+	assimilation	* from API 20NE
[Ref.: #118827]		nitrate ChEBI	-	reduction
[Ref.: #68369]		nitrate ChEBI	-	reduction	* from API 20NE
[Ref.: #118827]		nitrite ChEBI	-	reduction
[Ref.: #68369]		tryptophan ChEBI	-	energy source	* from API 20NE
[Ref.: #68369]		urea ChEBI	-	hydrolysis	* from API 20NE
		Only first 10 entries are displayed. Click here to see all.

	Antibiotica	Metabolite	Antibiotic sensitivity	Antibiotic resistance
[Ref.: #118827]		0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)	yes	no

	Metabolite production	Metabolite	Production
[Ref.: #118827]		indole ChEBI	no
[Ref.: #68369]		indole ChEBI	no	* from API 20NE

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test	Indole test
[Ref.: #118827]		acetoin ChEBI	-
[Ref.: #118827]		glucose ChEBI		-
[Ref.: #68369]		indole ChEBI			-	* from API 20NE

	Enzymes	Enzyme	Enzyme activity	EC number
[Ref.: #68382]		acid phosphatase	-	3.1.3.2	* from API zym
[Ref.: #118827]		alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]		alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]		alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]		alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #118827]		amylase	-
[Ref.: #68369]		arginine dihydrolase	-	3.5.3.6	* from API 20NE
[Ref.: #118827]		beta-galactosidase	+	3.2.1.23
[Ref.: #68369]		beta-glucosidase	+	3.2.1.21	* from API 20NE
[Ref.: #68382]		beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]		beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #118827]		caseinase	-	3.4.21.50
[Ref.: #118827]		catalase	+	1.11.1.6
[Ref.: #68382]		cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #118827]		DNase	-
[Ref.: #118827]		gamma-glutamyltransferase	+	2.3.2.2
[Ref.: #118827]		gelatinase	+/-
[Ref.: #68369]		gelatinase	+		* from API 20NE
[Ref.: #68382]		leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #118827]		lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]		N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #118827]		ornithine decarboxylase	-	4.1.1.17
[Ref.: #118827]		oxidase	-
[Ref.: #118827]		phenylalanine ammonia-lyase	-	4.3.1.24
[Ref.: #118827]		tryptophan deaminase	-
[Ref.: #118827]		tween esterase	-
[Ref.: #118827]		urease	-	3.5.1.5
[Ref.: #68369]		urease	-	3.5.1.5	* from API 20NE
		Only first 10 entries are displayed. Click here to see all.

API® 20NE:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Reduction of nitratesNO3	Indole productionTRP	Fermentation of D-glucoseGLU_ Ferm	Arginine dihydrolaseADH (Arg)	Urease/urea hydrolysisURE	Esculin hydrolysis/beta-GlucosidaseESC	Gelatinase/gelatin hydrolysisGEL	beta-GalactosidasePNPG	Assimilation of D-glucoseGLU_ Assim	Assimilation of L-arabinoseARA	Assimilation of D-mannoseMNE	Assimilation of D-mannitolMAN	Assimilation of N-acetyl-glucosamineNAG	Assimilation of maltoseMAL	Assimilation of gluconateGNT	Assimilation of capric acidCAP	Assimilation adipic acidADI	Assimilation of malic acidMLT	Assimilation of citric acidCIT	Assimilation of phenyl-acetic acidPAC	Cytochrome oxidaseOX
[Ref.: #11368]	25421	-	-	-	-	-	+	+	+	+/-	+/-	+/-	+	+/-	+	+	-	+/-	+	+	-	not determinedn.d.

API® Biotype100:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
[Ref.: #118827]	1815	not determinedn.d.	-	-	-	+	-	-	-	-	-	+	+	-	-	-	-	+	-	-	+	-	-	-	+	-	-	-	+	-	-	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	-	+	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	+	-	-	-	+	+	-	-	-	-	-	-	-	-	+	+	+	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #118827]	9780	-	+	+	+	+	+	-	-	-	+	-	+	+	+	-	+	-	+	-	-
[Ref.: #11368]	14373	-	-	-	-	-	+	+	-	+	+/-	-	-	-	+/-	-	+	-	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #11368]	Sample type/isolated from	soil
[Ref.: #11368]	Geographic location (country and/or sea, region)	Yunnan Province
[Ref.: #11368]	Country	China
[Ref.: #11368]	Country ISO 3 Code	CHN
[Ref.: #11368]	Continent	Asia

[Ref.: #67770]	Sample type/isolated from	Soil
[Ref.: #67770]	Geographic location (country and/or sea, region)	Yunnan Province
[Ref.: #67770]	Country	China
[Ref.: #67770]	Country ISO 3 Code	CHN
[Ref.: #67770]	Continent	Asia

[Ref.: #118827]	Sample type/isolated from	Environment, Soil
[Ref.: #118827]	Geographic location (country and/or sea, region)	Yunnan
[Ref.: #118827]	Country	China
[Ref.: #118827]	Country ISO 3 Code	CHN
[Ref.: #118827]	Continent	Asia
* marker position based on {}

Isolation sources categories

#Environmental

#Terrestrial

#Soil

What are isolation sources categories?

Global distribution of 16S sequence AB006178 (>99% sequence identity) for Actinoalloteichus from Microbeatlas

Aquatic Samples	125
Soil Samples	1111
Animal Samples	269
Plant Samples	164
Total Samples	1669

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #11368]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #118827]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #20218]	Actinoalloteichus caeruleus gene for 16S ribosomal RNA, partial sequence	AB006178	1468	GenBank ENA	65497 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Actinoalloteichus caeruleus DSM 43889	GCA_000429185	contig	GenBank ENA	1120930 tax ID
[Ref.: #66792]	Actinoalloteichus cyanogriseus DSM 43889	1120930.3	wgs	PATRIC	1120930 tax ID	*
[Ref.: #66792]	Actinoalloteichus cyanogriseus DSM 43889	2524614639	draft	JGI IMG/M	1120930 tax ID	*
[Ref.: #66792]	Actinoalloteichus cyanogriseus DSM 43889	2585427525	draft	JGI IMG/M	1120930 tax ID	*

[Ref.: #67770]	GC-content	72.5 mol%	high performance liquid chromatography (HPLC)
[Ref.: #67770]	GC-content	69.54 mol%	thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Actinoalloteichus cyanogriseus DSM 43889 DSM 43889 NCBI: GCA_000429185.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	yes	99	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Actinoalloteichus cyanogriseus DSM 43889 PATRIC: 1120930.3
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	91.608	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.178	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	72.875	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	90.39	yes
[Ref.: #69480]	thermophilic	thermophileⓘ	no	93.922	no
[Ref.: #69480]	flagellated	motile2+ⓘ	no	91.082	no

Availability in culture collections External links

Culture collection no.

DSM 43889, IFO 14455, IMET 43868, JCM 6095, NBRC 14455, NRRL B-16252, CGMCC 4.1159, CIP 106755, KCCM 12121, VKM Ac-1271, AS 4.1159

SI-ID 297066

*

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Reclassification of Streptomyces caeruleus as a synonym of Actinoalloteichus cyanogriseus and reclassification of Streptomyces spheroides and Streptomyces laceyi as later synonyms of Streptomyces niveus.	Tamura T, Ishida Y, Otoguro M, Hatano K, Labeda D, Price NP, Suzuki K	Int J Syst Evol Microbiol	10.1099/ijs.0.65560-0	2008	*
Phylogeny	Actinoalloteichus cyanogriseus gen. nov., sp. nov.	Tamura T, Zhiheng L, Yamei Z, Hatano K	Int J Syst Evol Microbiol	10.1099/00207713-50-4-1435	2000	*

References

#11368

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43889

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#39572 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66793

Mukherjee et al.: GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life. 35: 676 - 683 2017 ( DOI 10.1038/nbt.3886 , PubMed 28604660 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68369

Automatically annotated from API 20NE .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#82400

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID297066.1 )

#118827 Collection of Institut Pasteur ; Curators of the CIP; CIP 106755
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.