Name: Actinoalloteichus caeruleus DSM 40103
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 13191

Type strain:

Species: Actinoalloteichus caeruleus

Culture col. no.: DSM 40103, AS 4.1372, ATCC 27421, CBS 645.72, IFO 13344, ISP 5103, KCC S-0181, KCC S-0730, NBRC 13344, RIA 1305, IPV 930, JCM 4014, BCRC 13659, CGMCC 4.1372, IMET 40622, JCM 4730, MTCC 4995, NBRC 100143, NRRL B-1623, NRRL B-2194, NRRL ISP-5103, RIA 755, VKM Ac-1918

Strain history: KCC S-0014 <-- Y. Okami <-- T. Yamaguchi <-- NRRL B-1623.

NCBI tax ID(s): 2893586 (species)

SI-ID 13389

LMG 19399, ATCC 27421, CCRC 13659, DSM 40103, IFO 13344, IMET 40622, JCM 4014, JCM 4730, NRRL B-1623, NRRL B-2194, VKM Ac-1918, CBS 645.72, NBRC 100143, NBRC 13344, AS 4.1372, NBRC 100066, BCRC 13659, CGMCC 4.1372

Special Collections

DSMZ
JCM

Section

Actinoalloteichus caeruleus DSM 40103 is a Gram-positive bacterium that produces antibiotic compounds and was isolated from rice straw.

antibiotic compound production
Gram-positive
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Pseudonocardiales*
	Family	*Pseudonocardiaceae*
	Genus	*Actinoalloteichus*
	Species	**Actinoalloteichus caeruleus**
	Full Scientific Name (LPSN)	Actinoalloteichus caeruleus (Baldacci 1944) Teo et al. 2021

	Synonym	"Actinomyces* caeruleus"*
	Synonym	Actinoalloteichus cyanogriseus
	Synonym	Streptomyces caeruleus

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %91.409

[Ref.: #69480]	Motility	no Confidence in %90.082

Multimedia content

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Caption:

Medium 65 pH8 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #9314]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #9314]	Name of produced compound	caerulomycin
[Ref.: #20216]	Name of produced compound	Caerulomycin

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #9314]	Sample type/isolated from	rice straw

[Ref.: #67770]	Sample type/isolated from	Rice straw
* marker position based on {}

Isolation sources categories

#Host	#Plants	#Herbaceous plants (Grass,Crops)
#Host Body Product	#Plant	#Straw

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence HG917901 (>99% sequence identity) for Actinoalloteichus from Microbeatlas

Aquatic Samples	125
Soil Samples	1111
Animal Samples	269
Plant Samples	164
Total Samples	1669

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

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Biosafety level

Risk group (German classification)
According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Streptomyces caeruleus strain NRRL B-2194 16S ribosomal RNA gene, partial sequence	EF178675	1481	GenBank ENA	2893586 tax ID
[Ref.: #20218]	Actinoalloteichus caeruleus gene for 16S rRNA, partial sequence, strain: NBRC 13344	AB184345	1470	GenBank ENA	65497 tax ID	*
[Ref.: #20218]	Actinoalloteichus cyanogriseus strain AS 4.1372 16S ribosomal RNA gene, partial sequence	FJ406110	1357	GenBank ENA	65497 tax ID	*
[Ref.: #20218]	Actinoalloteichus cyanogriseus partial 16S rRNA gene, strain DSM 40103	HG917901	1488	GenBank ENA	65497 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Actinoalloteichus caeruleus NRRL ISP-5103	GCA_000716095	scaffold	GenBank ENA	2893586 tax ID
[Ref.: #67770]	Actinoalloteichus caeruleus NRRL B-2194	GCA_000718005	contig	GenBank ENA	2893586 tax ID

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GC-content

72.5 mol%

genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Actinoalloteichus cyanogriseus NRRL ISP-5103 NCBI: GCA_000716095.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	91.409	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	96.926	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	89.988	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	73.249	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	91.797	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	90.082	no

Availability in culture collections External links

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Culture collection no.

DSM 40103, AS 4.1372, ATCC 27421, CBS 645.72, IFO 13344, ISP 5103, KCC S-0181, KCC S-0730, NBRC 13344, RIA 1305, IPV 930, JCM 4014, BCRC 13659, CGMCC 4.1372, IMET 40622, JCM 4730, MTCC 4995, NBRC 100143, NRRL B-1623, NRRL B-2194, NRRL ISP-5103, RIA 755, VKM Ac-1918

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SI-ID 13389

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Reclassification of Streptomyces caeruleus as a synonym of Actinoalloteichus cyanogriseus and reclassification of Streptomyces spheroides and Streptomyces laceyi as later synonyms of Streptomyces niveus.	Tamura T, Ishida Y, Otoguro M, Hatano K, Labeda D, Price NP, Suzuki K	Int J Syst Evol Microbiol	10.1099/ijs.0.65560-0	2008	*

References

#9314

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 40103

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#82399

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID13389.1 )

* These data were automatically processed and therefore are not curated

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Actinoalloteichus cyanogriseus NRRL ISP-5103

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