Pseudomonas chlororaphis subsp. aureofaciens (DSM 50082, ATCC 13986, ICPB 2393)

Name: Pseudomonas chlororaphis subsp. aureofaciens (DSM 50082, ATCC 13986, ICPB 2393)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12813

Type strain

Culture col. no. DSM 50082 ATCC 13986 ICPB 2393 NRRL B-1543 P CCUG 29517 4 more

NCBI tax ID(s) 587851

Special Collections DSMZ CCUG JCM

History <- ICPB <- NRRL IAM 1001 <-- T. Asai KS 0004 <-- NRRL B-1543.

Links

Pseudomonas chlororaphis subsp. aureofaciens DSM 50082 is an aerobe bacterium that was isolated from silt loam.

aerobe Bacteria

Name and taxonomic classification

SI-ID 35945

ATCC 13986,NRRL B-1543,CCUG 29517,DSM 50082,NCIMB 9265,IAM1001,IFO3523,NCIB 9265,LMD 54.12,NCCB 54012,NBRC 3523,BCRC 11014,CCRC 11014,KCTC 12297,CGMCC 1.2785,JCM 20003

@ref 20215

Last LPSN update 2026-02-09 11:20:56

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas chlororaphis subsp. aureofaciens

Full scientific name Pseudomonas chlororaphis subsp. aureofaciens (Kluyver 1956) Peix et al. 2007

Synonyms (1)

Pseudomonas aureofaciens

BacDive ID	Other strains from **Pseudomonas chlororaphis subsp. aureofaciens** (7)	Type strain
13158	P. chlororaphis subsp. aureofaciens EIII.9.25.1, L8, CCUG 712, CIP 103295, NCTC ... (type strain)
12811	P. chlororaphis subsp. aureofaciens 305-STR-1-4, DSM 6508
12812	P. chlororaphis subsp. aureofaciens RW71, DSM 11437, DSM 12972
12814	P. chlororaphis subsp. aureofaciens DSM 50135, ATCC 17810, ICPB 2941-389, NRRL ...
12815	P. chlororaphis subsp. aureofaciens DSM 50136, ATCC 17811, ICPB 2942-390, NRRL ...
12816	P. chlororaphis subsp. aureofaciens DSM 50139, ATCC 17415, ICPB 2717-36, NRRL ...
131887	P. chlororaphis subsp. aureofaciens PT02, DSM 29578

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
12632	NUTRIENT AGAR (DSMZ Medium 1)		Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
12632	positive	growth	28
49642	positive	growth	28-37
67770	positive	growth	25

Physiology and metabolism

Oxygen tolerance

49642

Oxygen toleranceaerobe

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	+	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	+	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	-	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	-	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
68369	arginine dihydrolase	+	3.5.3.6	from API 20NE
68382	beta-galactosidase	-	3.2.1.23	from API zym
68382	beta-glucosidase	-	3.2.1.21	from API zym
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68382	beta-glucuronidase	-	3.2.1.31	from API zym
68382	cystine arylamidase	-	3.4.11.3	from API zym
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
68382	trypsin	-	3.4.21.4	from API zym
68369	urease	-	3.5.1.5	from API 20NE
68382	valine arylamidase	-		from API zym

Fatty acid profile

Metadata FA analysis

@ref

49642

Fatty acid	Percentage	ECL
C16:0	31.4	16
C16:1 ω7c	25.2	15.819
C17:0 CYCLO	12.7	16.888
C18:1 ω7c /12t/9t	10.7	17.824
C12:0 2OH	5.3	13.178
C10:0 3OH	4.6	11.423
C12:0 3OH	3.6	13.455
C12:0	2.6	12
C14:0	0.6	14
C18:1 ω9c	0.6	17.769
C18:2 ω6,9c/C18:0 ANTE	0.6	17.724
C15:0	0.5	15
C19:0 CYCLO ω8c	0.5	18.9
C18:0	0.4	18
C17:0	0.4	17
C17:1 ω8c	0.2	16.792

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
49642	-	+	+	+	-	+	-	-	-	-	+	+	-	-	-	-	-	-	-	-

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
49642	-	-	-	+	-	-	-	-	+	+	+	+	+	-	+	+	-	+	+	+	+
12632	-	-	-	+	-	-	+	-	+	+	+	+	+	-	+	+	-	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Environmental	#Terrestrial	#Mud (Sludge)

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent
12632	silt loam	Miami	USA	USA	North America
49642	Silt loam	Springfield,OH	USA	USA	North America
67770	Soil

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12632	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	DNA hybridization probe for the Pseudomonas fluorescens group.	Festl H, Ludwig W, Schleifer KH.	Appl Environ Microbiol	10.1128/aem.52.5.1190-1194.1986	1986
	Development of a real-time loop-mediated isothermal amplification method for monitoring Pseudomonas lurida in raw milk throughout the year of pasture.	Zhang S, Hu L, Xue Y, Zhang D, Zhang Y, Wang S.	Front Microbiol	10.3389/fmicb.2023.1133077	2023
Enzymology	Bacteria from the Midgut of Common Cockchafer (Melolontha melolontha L.) Larvae Exhibiting Antagonistic Activity Against Bacterial Symbionts of Entomopathogenic Nematodes: Isolation and Molecular Identification.	Skowronek M, Sajnaga E, Pleszczynska M, Kazimierczak W, Lis M, Wiater A.	Int J Mol Sci	10.3390/ijms21020580	2020
Metabolism	Arogenate (pretyrosine) pathway of tyrosine and phenylalanine biosynthesis in Pseudomonas aureofaciens ATCC 15926.	Keller B, Keller E, Salcher O, Lingens F	J Gen Microbiol	10.1099/00221287-128-6-1199	1982

References

#12632	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50082
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#49642	Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 29517
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68369	Automatically annotated from API 20NE .
#68382	Automatically annotated from API zym .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

Rate our new design

Content

About us

Pseudomonas chlororaphis subsp. aureofaciens (DSM 50082, ATCC 13986, ICPB 2393)

Name and taxonomic classification

Morphology