Pseudomonas chlororaphis subsp. aureofaciens (DSM 50136, ATCC 17811, ICPB 2942-390)

Name: Pseudomonas chlororaphis subsp. aureofaciens (DSM 50136, ATCC 17811, ICPB 2942-390)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 12815

Type strain

Culture col. no. DSM 50136 ATCC 17811 ICPB 2942-390 NRRL B-1095

NCBI tax ID(s) 587851

Special Collections DSMZ

History <- ICPB <- NRRL

Links

Pseudomonas chlororaphis subsp. aureofaciens DSM 50136 is a bacterium that was isolated from caterpillar.

genome sequence Bacteria

Name and taxonomic classification

SI-ID 36742

ATCC 17811,NRRL B-1095,DSM 50136

@ref 20215

Last LPSN update 2026-02-09 11:20:56

Domain Bacteria

Phylum Pseudomonadota

Class Gammaproteobacteria

Order Pseudomonadales

Family Pseudomonadaceae

Genus Pseudomonas

Species Pseudomonas chlororaphis subsp. aureofaciens

Full scientific name Pseudomonas chlororaphis subsp. aureofaciens (Kluyver 1956) Peix et al. 2007

Synonyms (1)

Pseudomonas aureofaciens

BacDive ID	Other strains from **Pseudomonas chlororaphis subsp. aureofaciens** (7)	Type strain
13158	P. chlororaphis subsp. aureofaciens EIII.9.25.1, L8, CCUG 712, CIP 103295, NCTC ... (type strain)
12811	P. chlororaphis subsp. aureofaciens 305-STR-1-4, DSM 6508
12812	P. chlororaphis subsp. aureofaciens RW71, DSM 11437, DSM 12972
12813	P. chlororaphis subsp. aureofaciens DSM 50082, ATCC 13986, ICPB 2393, NRRL B-1543 ...
12814	P. chlororaphis subsp. aureofaciens DSM 50135, ATCC 17810, ICPB 2941-389, NRRL ...
12816	P. chlororaphis subsp. aureofaciens DSM 50139, ATCC 17415, ICPB 2717-36, NRRL ...
131887	P. chlororaphis subsp. aureofaciens PT02, DSM 29578

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	97.5

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
12641	NUTRIENT AGAR (DSMZ Medium 1)		Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
12641	positive	growth	26

Physiology and metabolism

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68369	17128 ChEBI	adipate	-	assimilation	from API 20NE
68369	29016 ChEBI	arginine	+	hydrolysis	from API 20NE
68369	17634 ChEBI	D-glucose	+	assimilation	from API 20NE
68369	17634 ChEBI	D-glucose	-	fermentation	from API 20NE
68369	16899 ChEBI	D-mannitol	+	assimilation	from API 20NE
68369	16024 ChEBI	D-mannose	+	assimilation	from API 20NE
68369	27689 ChEBI	decanoate	+	assimilation	from API 20NE
68369	4853 ChEBI	esculin	-	hydrolysis	from API 20NE
68369	5291 ChEBI	gelatin	-	hydrolysis	from API 20NE
68369	24265 ChEBI	gluconate	+	assimilation	from API 20NE
68369	30849 ChEBI	L-arabinose	-	assimilation	from API 20NE
68369	25115 ChEBI	malate	+	assimilation	from API 20NE
68369	17306 ChEBI	maltose	-	assimilation	from API 20NE
68369	59640 ChEBI	N-acetylglucosamine	+	assimilation	from API 20NE
68369	17632 ChEBI	nitrate	+	reduction	from API 20NE
68369	27897 ChEBI	tryptophan	-	energy source	from API 20NE
68369	16199 ChEBI	urea	-	hydrolysis	from API 20NE

Metabolite production

@ref	Chebi-ID	Metabolite	Production
68369	35581 ChEBI	indole		from API 20NE

Metabolite tests

@ref	Chebi-ID	Metabolite	Indole test
68369	35581 ChEBI	indole	-	from API 20NE

Enzymes

@ref	Value	Activity	Ec
68369	arginine dihydrolase	+	3.5.3.6	from API 20NE
68369	beta-glucosidase	-	3.2.1.21	from API 20NE
68369	cytochrome oxidase	+	1.9.3.1	from API 20NE
68369	gelatinase	-		from API 20NE
68369	urease	-	3.5.1.5	from API 20NE

API 20NE

@ref	Reduction of nitratesNO3	TRP	GLU_ Ferm	ADH (Arg)	URE	ESC	GEL	PNPG	GLU_ Assim	ARA	MNE	MAN	NAG	MAL	GNT	CAP	ADI	MLT	CIT	PAC	OX
12641	+	-	-	+	-	-	-	-	+	-	+	+	+	-	+	+	-	+	+	+	+

Isolation, sampling and environmental information

Isolation source categories

Cat1	Cat2	Cat3
#Host	#Arthropoda	#Insecta

Isolation

12641

Sample typecaterpillar

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
12641	1	Risk group (German classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
66792	ASM2874748v1 assembly for Pseudomonas chlororaphis ATCC 17811	complete	GCA_028747485	587753.157	8084833194	587753	95.61

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Pseudomonas chlororaphis ATCC 17811
NCBI: GCA_028747485.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	97.50	no
125438	anaerobic	anaerobicⓘ	no	91.50	no
125438	aerobic	aerobicⓘ	yes	79.99	no
125438	spore-forming	spore-formingⓘ	no	85.66	no
125438	thermophilic	thermophileⓘ	no	98.00	no
125438	flagellated	motile2+ⓘ	yes	78.38	no

Literature

References

#12641	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 50136
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#68369	Automatically annotated from API 20NE .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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