Name: Cellulosimicrobium cellulans DSM 20424
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 12574

Type strain:

Species: Cellulosimicrobium cellulans

Culture col. no.: DSM 20424, ATCC 21606, JCM 20471, CIP 78.63, IAM 12312, IMET 10892, KCCM 11857, NCIMB 11921

Strain history: IAM 12312 <-- H. Saito <-- M. Takanami; Kyoto Univ., Japan <-- R. J. Roberts; Cold Sprig Habor Lab., USA <-- ATCC 21606 <-- Kirin Brewery Co., Ltd., Japan.

NCBI tax ID(s): 1710 (species)

SI-ID 10204

LMG 16259, ATCC 21606, DSM 20424, NCIMB 11921, IMET10892, CIP 78.63, KCTC 1532, BCRC 11587, CCRC 11587, IAM 12312, NRRL B-4567, JCM 20471

Special Collections

Other strains from Cellulosimicrobium cellulans

Section

Cellulosimicrobium cellulans DSM 20424 is a human pathogen that was isolated from brewery sewage.

human pathogen
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Promicromonosporaceae*
	Genus	*Cellulosimicrobium*
	Species	**Cellulosimicrobium cellulans**
	Full Scientific Name (LPSN)	Cellulosimicrobium cellulans (Metcalfe and Brown 1957) Schumann et al. 2001

	Synonym	Brevibacterium lyticum
	Synonym	Cellulomonas cartae
	Synonym	Oerskovia xanthineolytica
	Synonym	Nocardia cellulans
	Synonym	Brevibacterium fermentans
	Synonym	Cellulomonas cellulans
	Synonym	"Cellulomonas* cartalyticum"*

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8803]

Culture medium

TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)

[Ref.: #8803]

Culture medium growth

[Ref.: #8803]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8803]

Culture medium composition

expand / minimize

[Ref.: #8803]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #8803]

Culture medium growth

[Ref.: #8803]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8803]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #8803]			growth	28 °C
[Ref.: #67770]			growth	30 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #8803]	Name of produced compound	enzyme
[Ref.: #8803]	Name of produced compound	lytic enzymes
[Ref.: #8803]	Name of produced compound	restriction endonuclease AluI
[Ref.: #20216]	Name of produced compound	Endonuclease Alu I
[Ref.: #20216]	Name of produced compound	enzyme lytic on yeast cell wall
[Ref.: #67770]	Name of produced compound	Restriction endonuclease

[Ref.: #8803]	Murein short key	A11.37
[Ref.: #8803]	Murein types	A4alpha L-Lys-D-Ser-D-Asp

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8803]	Sample type/isolated from	brewery sewage

[Ref.: #67770]	Sample type/isolated from	Brewery sewage
* marker position based on {}

Isolation sources categories

#Engineered

#Waste

#Industrial wastewater

What are isolation sources categories?

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8803]	Pathogenicity (human)	yes, in single cases
[Ref.: #8803]	Pathogenicity (animal)	yes, in single cases
[Ref.: #8803]	Biosafety level	1	Risk group (German classification) According to TRBA 466

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Cellulosimicrobium cellulans ATCC 21606	GCA_005239305	contig	GenBank ENA	1710 tax ID
[Ref.: #66792]	Cellulosimicrobium cellulans strain ATCC 21606	1710.18	wgs	PATRIC	1710 tax ID	*
[Ref.: #66792]	Cellulosimicrobium cellulans strain NEB113	1710.20	complete	PATRIC	1710 tax ID	*

[Ref.: #8803]

GC-content

55.0 mol%

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Cellulosimicrobium cellulans strain NEB113 PATRIC: 1710.20
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	80	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Cellulosimicrobium cellulans strain NEB113 PATRIC: 1710.20
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	89.302	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	91.857	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	55.871	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	75.289	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	97.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	67.5	no

Availability in culture collections External links

[Ref.: #8803]

Culture collection no.

DSM 20424, ATCC 21606, JCM 20471, CIP 78.63, IAM 12312, IMET 10892, KCCM 11857, NCIMB 11921

[Ref.: #81788]

SI-ID 10204

Literature:

	Title	Authors	Journal	DOI	Year
	Revisiting the Cellulosimicrobium cellulans yeast-lytic beta-1,3-glucanases toolbox: a review.	Ferrer P	Microb Cell Fact	10.1186/1475-2859-5-10	2006	*

References

#8803

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20424

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20216

Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) Curators of the HKI: Collection Description Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. Hans-Knöll-Institut (HKI) .

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#81788

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID10204.1 )

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Cellulosimicrobium cellulans in external resources:
SILVA
BRENDA
PANGAEA
GBIF

Cellulosimicrobium cellulans strain NEB113

Cellulosimicrobium cellulans strain NEB113

Change proposal

Change proposal