Name: Cellulosimicrobium cellulans LL G-62
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 12578

Type strain:

Species: Cellulosimicrobium cellulans

Strain Designation: LL G-62

Culture col. no.: DSM 46030, ATCC 27402, CECT 3050, CIP 81.28, IMET 7383, IMRU 3959, JCM 3164, KCC A-0164, NCIB 11025, CGMCC 1.2019, CGMCC 4.1492, IFO 16148, KCTC 9085, LMG 16121, NBRC 16148, NCIMB 11025, NRRL B-16088, PCM 2385, NBIMCC 2142

Strain history: CIP <- 1981, Central Res. Lab., Tokyo, Japan: strain KCC A-0164 <- M.P. Lechevalier: strain LLG 62, Oerskovia xanthineolytica

NCBI tax ID(s): 1242247 (strain), 1710 (species)

SI-ID 7899

LMG 16121, ATCC 27402, CECT 3050, DSM 46030, IMET 7383, JCM 3164, KCTC 9085, NCIMB 11025, NRRL B-16088, CCUG 12171, CCUG 17962, NBIMCC 2142, NCIB 11025, IFO 16148, CIP 81.28, NBRC 16148, CGMCC 1.2019, CGMCC 4.1492

Other strains from Cellulosimicrobium cellulans

C. cellulans DSM 43879, ATCC 12830, DSM 43189, ... (type strain)
C. cellulans CD1-BL204R1, DSM 29131
C. cellulans DSM 7461
C. cellulans DSM 20106, ATCC 21681, NCIB 11440, ...
C. cellulans DSM 20155, NCIB 9097
C. cellulans DSM 20424, ATCC 21606, JCM 20471, ...
C. cellulans DSM 43881, IMET 7075
C. cellulans 1a(3), 24 Foal Blackwell, B10, ...
C. cellulans LL Y 13-4, LL Y13-4, DSM 46031, ...
C. cellulans X 64, DSM 46215, CIP 66.11, IMET ...
C. cellulans ST027450(HKI),
C. cellulans ST032941(HKI), S024,
C. cellulans ST032954(HKI), S038,
C. cellulans ST032958(HKI), S042,
C. cellulans ST033024(HKI),
C. cellulans ST032577(HKI),
C. cellulans CIP 66.26
C. cellulans JL 43 GO, CIP 104849
C. cellulans R424, CIP 101190
C. cellulans 660.84, CIP 101063
C. cellulans CIP 101191
C. cellulans CCUG 28795
C. cellulans CCUG 42917
C. cellulans CCUG 50454
C. cellulans CCUG 61916
C. cellulans IMI 378895
C. cellulans JCM 1972, ATCC 15921, BCRC 10023, ...

Section

Cellulosimicrobium cellulans LL G-62 is a facultative anaerobe, mesophilic, Gram-positive human pathogen that was isolated from aluminium hydroxide gel antacid.

Gram-positive
facultative anaerobe
human pathogen
mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micrococcales*
	Family	*Promicromonosporaceae*
	Genus	*Cellulosimicrobium*
	Species	**Cellulosimicrobium cellulans**
	Full Scientific Name (LPSN)	Cellulosimicrobium cellulans (Metcalfe and Brown 1957) Schumann et al. 2001

	Synonym	Brevibacterium lyticum
	Synonym	Cellulomonas cartae
	Synonym	Oerskovia xanthineolytica
	Synonym	Nocardia cellulans
	Synonym	Brevibacterium fermentans
	Synonym	Cellulomonas cellulans
	Synonym	"Cellulomonas* cartalyticum"*

Information on morphological and physiological properties Morphology

[Ref.: #117236]	Gram stain	negative
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #117236]	Cell shape	rod-shaped

[Ref.: #117236]	Motility	no

Information on culture and growth conditions Culture and growth conditions

[Ref.: #12395]

Culture medium

TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)

[Ref.: #12395]

Culture medium growth

[Ref.: #12395]

Culture medium link

Medium recipe at MediaDive

[Ref.: #12395]

Culture medium composition

expand / minimize

[Ref.: #41198]

Culture medium

MEDIUM 3 - Columbia agar

[Ref.: #41198]

Culture medium growth

[Ref.: #41198]

Culture medium composition

expand / minimize

[Ref.: #117236]

Culture medium

CIP Medium 3

[Ref.: #117236]

Culture medium growth

[Ref.: #117236]

Culture medium link

Medium recipe provided by DSMZ

[Ref.: #117236]

Culture medium

CIP Medium 72

[Ref.: #117236]

Culture medium growth

[Ref.: #117236]

Culture medium link

Medium recipe provided by DSMZ

		Temperature
[Ref.: #12395]	growth	28 °C
[Ref.: #41198]	growth	30 °C
[Ref.: #67770]	growth	28 °C

[Ref.: #12395]	Temperature range	mesophilic
[Ref.: #41198]	Temperature range	mesophilic
[Ref.: #67770]	Temperature range	mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #117236]

Oxygen tolerance

facultative anaerobe

[Ref.: #69480]

Ability of spore formation

no Confidence in %99.889

[Ref.: #67770]

Observation

quinones: MK-9(H₄)

	Metabolite utilization	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #117236]		nitrate ChEBI	+	reduction
[Ref.: #117236]		nitrite ChEBI	-	reduction

	Metabolite production	Metabolite	Production
[Ref.: #117236]		indole ChEBI	no

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	+	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	+	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	+	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #117236]	catalase	+	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	+		* from API zym
[Ref.: #68382]	leucine arylamidase	+	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	+	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #117236]	oxidase	-
[Ref.: #68382]	trypsin	+	3.4.21.4	* from API zym
[Ref.: #117236]	urease	-	3.5.1.5
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #117236]	13471	-	+	+	+	-	+	-	-	+	-	+	+	-	+	-	+	+	+	-	-

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #12395]	Sample type/isolated from	aluminium hydroxide gel antacid

[Ref.: #67770]	Sample type/isolated from	Aluminum hydroxide gel antacid

[Ref.: #117236]	Sample type/isolated from	Aluminium hydroxide gel antiacid
* marker position based on {}

Isolation sources categories

#Engineered

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X79453 (>99% sequence identity) for Cellulosimicrobium from Microbeatlas

Aquatic Samples	417
Soil Samples	1873
Animal Samples	1680
Plant Samples	1505
Total Samples	5475

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #12395]	Pathogenicity (human)	yes, in single cases
[Ref.: #12395]	Pathogenicity (animal)	yes, in single cases
[Ref.: #12395]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #117236]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Cellulomonas cellulans gene for 16S rRNA, strain:IFO 16148	AB023355	1474	ENA	1242247 tax ID
[Ref.: #67770]	Oerskovia xanthineolytica NCIMB 11025 16S rDNA	X79453	1489	ENA	1242247 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Cellulosimicrobium cellulans LMG 16121	GCA_000321105	contig	GenBank	1242247 tax ID
[Ref.: #66792]	Cellulosimicrobium cellulans LMG 16121	1242247.3	wgs	PATRIC	1242247 tax ID	*
[Ref.: #66792]	Cellulosimicrobium cellulans LMG 16121	2551306489	draft	JGI IMG/M	1242247 tax ID	*

[Ref.: #12395]	GC-content	74.2 mol%
[Ref.: #67770]	GC-content	74.3 mol%	genome sequence analysis
[Ref.: #67770]	GC-content	74.2 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Cellulosimicrobium cellulans LMG 16121 PATRIC: 1242247.3
[Ref.: #69481]	spore-forming	no	78	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Cellulosimicrobium cellulans LMG 16121 PATRIC: 1242247.3
[Ref.: #69480]	motile	yes	70.14	no
[Ref.: #69480]	gram-positive	yes	86.855	no
[Ref.: #69480]	anaerobic	no	98.314	no
[Ref.: #69480]	aerobic	yes	90.226	no
[Ref.: #69480]	halophile	no	92.76	no
[Ref.: #69480]	spore-forming	no	86.682	no
[Ref.: #69480]	glucose-util	yes	89.718	no
[Ref.: #69480]	flagellated	no	91.951	no
[Ref.: #69480]	thermophile	no	98.939	yes
[Ref.: #69480]	glucose-ferment	no	65.688	no

Availability in culture collections External links

[Ref.: #12395]

Culture collection no.

DSM 46030, ATCC 27402, CECT 3050, CIP 81.28, IMET 7383, IMRU 3959, JCM 3164, KCC A-0164, NCIB 11025, CGMCC 1.2019, CGMCC 4.1492, IFO 16148, KCTC 9085, LMG 16121, NBRC 16148, NCIMB 11025, NRRL B-16088, PCM 2385, NBIMCC 2142

[Ref.: #81792]

SI-ID 7899

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Cellulosimicrobium composti sp. nov., a thermophilic bacterium isolated from compost.	Hu L, Xia M, Gao X, Huo YX, Yang Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.004905	2021	*
Genetics	(Meta)genomic insights into the pathogenome of Cellulosimicrobium cellulans.	Sharma A, Gilbert JA, Lal R	Sci Rep	10.1038/srep25527	2016	*

References

#12395

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 46030

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#41198 ; Curators of the CIP;

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#81792

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID7899.1 )

#117236 Collection of Institut Pasteur ; Curators of the CIP; CIP 81.28
* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Cellulosimicrobium cellulans in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF

Cellulosimicrobium cellulans LMG 16121

Cellulosimicrobium cellulans LMG 16121

Change proposal

Change proposal