Name: Micromonospora sp. 336
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 7905

Type strain:

Species: Micromonospora sp.

Strain Designation: 336

Culture col. no.: DSM 43170, DSM 43893, KCC A-0126, NRRL B-2673, JCM 3126, BCRC 12663, IFM 1277, NCIMB 12755

Strain history: KCC A-0126 <-- NRRL B-2673 <-- C. J. K. Wang 336.

NCBI tax ID(s): 1876 (species)

SI-ID 265324

DSM 43170, DSM 43893, NRRL B-2673, JCM 3126, CCRC 12663, NCIMB 12755, BCRC 12663, NBIMCC 1634

Special Collections

DSMZ
JCM

Other strains from Micromonospora sp.

Section

Micromonospora sp. 336 is a spore-forming, Gram-positive bacterium that was isolated from pulp and paper samples.

Gram-positive
spore-forming
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Micromonosporales*
	Family	*Micromonosporaceae*
	Genus	*Micromonospora*
	Full Scientific Name (LPSN)	Micromonospora Ørskov 1923 (Approved Lists 1980)

	Synonym	Verrucosispora
	Synonym	Xiangella
	Synonym	Jishengella

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %93.348

[Ref.: #69480]	Motility	no Confidence in %90.5

Information on culture and growth conditions Culture and growth conditions

[Ref.: #10838]

Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

[Ref.: #10838]

Culture medium growth

[Ref.: #10838]

Culture medium link

Medium recipe at MediaDive

[Ref.: #10838]

Culture medium composition

expand / minimize

[Ref.: #10838]

Culture medium

N-Z-AMINE-MEDIUM (DSMZ Medium 554)

[Ref.: #10838]

Culture medium growth

[Ref.: #10838]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #10838]			growth	28 °C
[Ref.: #67770]			growth	28 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Ability of spore formation

yes Confidence in %92.033

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #10838]	Sample type/isolated from	pulp and paper samples

[Ref.: #67770]	Sample type/isolated from	Pulp and paper samples
* marker position based on {}

Isolation sources categories

#Engineered

#Industrial

#Engineered product

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence X92600 (>99% sequence identity) for Micromonospora from Microbeatlas

Aquatic Samples	188
Soil Samples	470
Animal Samples	133
Plant Samples	13
Total Samples	804

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #10838]	M.globosa 16S rRNA gene (isolate DSM 43170)	X92600	1470	GenBank ENA	47863 tax ID
[Ref.: #20218]	M.globosa 16S rRNA gene (isolate DSM 43893)	X92615	1476	GenBank ENA	47863 tax ID	*

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Micromonospora globosa NRRL B-2673	GCA_000717585	contig	GenBank ENA	47863 tax ID

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Micromonospora globosa NRRL B-2673 NCBI: GCA_000717585.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	93.348	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	97.834	no
[Ref.: #69480]	aerobic	aerobicⓘ	yes	83.036	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	92.033	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	94.5	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	90.5	no

Availability in culture collections External links

[Ref.: #10838]

Culture collection no.

DSM 43170, DSM 43893, KCC A-0126, NRRL B-2673, JCM 3126, BCRC 12663, IFM 1277, NCIMB 12755

[Ref.: #77339]

SI-ID 265324

References

#10838

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 43170

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#77339

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID265324.1 )

* These data were automatically processed and therefore are not curated

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Search for species Micromonospora sp. in external resources:
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Micromonospora globosa NRRL B-2673

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