Name: Amylolactobacillus amylophilus B-4437
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 6411

Type strain:

Species: Amylolactobacillus amylophilus

Strain Designation: B-4437

Culture col. no.: CCUG 30137, NCIMB 11546, JCM 1125, DSM 20533, ATCC 49845, LMG 6900, NRRL B-4437, VKM B-2234, BCRC 14055, CCM 7001, CECT 4133, CGMCC 1.3394, CIP 102988, IFO 15881, KCTC 3161, NBRC 15881, NCAIM B.01457, NCFB 2503, NRRL B-4476, VTT E-95574, NCDO 2503

Strain history: CIP <- 1987, DSM <- L.K. Nakamura, NRRL, USA: strain B-4437

NCBI tax ID(s): 1603 (species)

SI-ID 3208

LMG 6900, CCUG 30137, JCM 1125, NCFB 2503, NCIMB 11546, NRRL B-4437, ATCC 49845, CIP 102988, NCDO 2503, NCIB 11546, CCRC 14055, IFO 15881, KCTC 3161, CECT 4133, CCRC 11647, NCAIM B.01457, NBRC 15881, VKM B-2234, CCM 7001, BCRC 11647, BCRC 14055, NRRL B-4476, VTT E-95574, DSM 20533

Special Collections

Other strains from Amylolactobacillus amylophilus

Section

Amylolactobacillus amylophilus B-4437 is a facultative anaerobe, Gram-positive bacterium that produces lactate and was isolated from swine waste-corn fermentation.

lactate production
Gram-positive
facultative anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Lactobacillales*
	Family	*Lactobacillaceae*
	Genus	*Amylolactobacillus*
	Species	**Amylolactobacillus amylophilus**
	Full Scientific Name (LPSN)	Amylolactobacillus amylophilus (Nakamura and Crowell 1981) Zheng et al. 2020

Synonym

Lactobacillus amylophilus

Information on morphological and physiological properties Morphology

[Ref.: #116360]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %95.19

[Ref.: #116360]	Cell shape	rod-shaped

[Ref.: #116360]	Motility	no
[Ref.: #69480]	Motility	no Confidence in %90.833

Information on culture and growth conditions Culture and growth conditions

[Ref.: #8763]

Culture medium

MRS MEDIUM (DSMZ Medium 11)

[Ref.: #8763]

Culture medium growth

[Ref.: #8763]

Culture medium link

Medium recipe at MediaDive

[Ref.: #8763]

Culture medium composition

expand / minimize

[Ref.: #40497]

Culture medium

MEDIUM 40- for Lactobacillus and Leuconostoc

[Ref.: #40497]

Culture medium growth

[Ref.: #40497]

Culture medium composition

expand / minimize

[Ref.: #116360]

Culture medium

CIP Medium 40

[Ref.: #116360]

Culture medium growth

[Ref.: #116360]

Culture medium link

Medium recipe provided by DSMZ

	Kind of temperature		Temperature
[Ref.: #8763]		growth	28 °C
[Ref.: #40497]		growth	30 °C
[Ref.: #49931]		growth	28 °C
[Ref.: #67770]		growth	30 °C
[Ref.: #116360]		growth	15-37 °C
[Ref.: #116360]	no	growth	45 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #116360]

Oxygen tolerance

facultative anaerobe

[Ref.: #69481]

Ability of spore formation

no Confidence in %100

[Ref.: #8763]

Name of produced compound

L(+) lactic acid

[Ref.: #8763]	Murein short key	A11.31
[Ref.: #8763]	Murein types	A4alpha L-Lys-D-Asp

	Metabolite	Utilization activity	Kind of utilization tested
[Ref.: #68371]	amygdalin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	arbutin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	cellobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-lyxose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-mannitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-ribose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-sorbitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-tagatose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	D-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	erythritol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	galactitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gentiobiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	gluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	glycerol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	inulin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-arabitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-fucose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-rhamnose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-sorbose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	L-xylose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	lactose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melezitose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	melibiose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-glucopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl alpha-D-mannoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	methyl beta-D-xylopyranoside ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	myo-inositol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #116360]	nitrate ChEBI	-	reduction
[Ref.: #116360]	nitrate ChEBI	+	respiration
[Ref.: #116360]	nitrite ChEBI	-	reduction
[Ref.: #68371]	Potassium 2-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	Potassium 5-ketogluconate ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	raffinose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	ribitol ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	salicin ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	sucrose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	trehalose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	turanose ChEBI	-	builds acid from	* from API 50CH acid
[Ref.: #68371]	xylitol ChEBI	-	builds acid from	* from API 50CH acid
	Only first 10 entries are displayed. Click here to see all.

	Physiological tests	Metabolite	Voges-Proskauer-test	Methylred-test
[Ref.: #116360]		acetoin ChEBI	-
[Ref.: #116360]		glucose ChEBI		+

	Enzyme	Enzyme activity	EC number
[Ref.: #68382]	acid phosphatase	+	3.1.3.2	* from API zym
[Ref.: #116360]	alcohol dehydrogenase	-	1.1.1.1
[Ref.: #68382]	alkaline phosphatase	+	3.1.3.1	* from API zym
[Ref.: #68382]	alpha-chymotrypsin	-	3.4.21.1	* from API zym
[Ref.: #68382]	alpha-fucosidase	-	3.2.1.51	* from API zym
[Ref.: #68382]	alpha-galactosidase	-	3.2.1.22	* from API zym
[Ref.: #68382]	alpha-glucosidase	-	3.2.1.20	* from API zym
[Ref.: #68382]	alpha-mannosidase	-	3.2.1.24	* from API zym
[Ref.: #68382]	beta-galactosidase	-	3.2.1.23	* from API zym
[Ref.: #68382]	beta-glucosidase	-	3.2.1.21	* from API zym
[Ref.: #68382]	beta-glucuronidase	-	3.2.1.31	* from API zym
[Ref.: #116360]	catalase	-	1.11.1.6
[Ref.: #68382]	cystine arylamidase	-	3.4.11.3	* from API zym
[Ref.: #68382]	esterase (C 4)	+		* from API zym
[Ref.: #68382]	esterase lipase (C 8)	-		* from API zym
[Ref.: #68382]	leucine arylamidase	-	3.4.11.1	* from API zym
[Ref.: #68382]	lipase (C 14)	-		* from API zym
[Ref.: #116360]	lysine decarboxylase	-	4.1.1.18
[Ref.: #68382]	N-acetyl-beta-glucosaminidase	-	3.2.1.52	* from API zym
[Ref.: #68382]	naphthol-AS-BI-phosphohydrolase	+		* from API zym
[Ref.: #116360]	ornithine decarboxylase	-	4.1.1.17
[Ref.: #116360]	oxidase	-
[Ref.: #68382]	trypsin	-	3.4.21.4	* from API zym
[Ref.: #68382]	valine arylamidase	-		* from API zym
	Only first 10 entries are displayed. Click here to see all.

Fatty acid profile

Metadata FA analysis

Reference

[Ref.: #49931]

Fatty acid	Percentage	ECL
C18:2 ω6,9c/C18:0 ANTE	32.4	17.724
C18:1 ω9c	27.3	17.769
C16:0	26.7	16
C18:0	3.9	18
C14:0	3.5	14
C16:1 ω7c	3.3	15.819
C16:1 ω9c	0.6	15.774
Unidentified	0.5	13.242
C17:1 ω8c	0.5	16.792
C12:0	0.5	12
C15:0	0.5	15
Unidentified	0.5	19.407

API® 50CH acid:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	ControlQ	Acid from glycerolGLY	Acid from erythritolERY	Acid from D-arabinoseDARA	Acid from L-arabinoseLARA	Acid from D-riboseRIB	Acid from D-xyloseDXYL	Acid from L-xyloseLXYL	Acid from D-adonitolADO	Acid from methyl beta-D-xylopyranosideMDX	Acid from D-galactoseGAL	Acid from D-glucoseGLU	Acid from D-fructoseFRU	Acid from D-mannoseMNE	Acid from L-sorboseSBE	Acid from L-rhamnoseRHA	Acid from dulcitolDUL	Acid from inositolINO	Acid from D-mannitolMAN	Acid from D-sorbitolSOR	Acid from methyl alpha-D-mannopyranosideMDM	Acid from methyl alpha-D-glucopyranosideMDG	Acid from N-acetyl-glucosamineNAG	Acid from amygdalinAMY	Acid from arbutinARB	Acid from esculinESC	Acid from salicinSAL	Acid from cellobioseCEL	Acid from maltoseMAL	Acid from lactoseLAC	Acid from melibioseMEL	Acid from sucroseSAC	Acid from trehaloseTRE	Acid from inulinINU	Acid from melezitoseMLZ	Acid from raffinoseRAF	Acid from starchAMD	Acid from glycogenGLYG	Acid from xylitolXLT	Acid from gentiobioseGEN	Acid from turanoseTUR	Acid from D-lyxoseLYX	Acid from D-tagatoseTAG	Acid from D-fucoseDFUC	Acid from L-fucoseLFUC	Acid from D-arabitolDARL	Acid from L-arabitolLARL	Acid from gluconateGNT	Acid from 2-Ketogluconate2KG	Acid from 5-Ketogluconate5KG
[Ref.: #8763]	14691	-	-	-	-	-	-	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	-	-	-	-	-	+	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-
[Ref.: #8763]	14690	-	-	-	-	-	-	-	-	-	-	+	+	+	+	-	-	-	-	-	-	-	-	+	-	-	+/-	-	-	+	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-	-	-	-	-
[Ref.: #116360]	9120	not determinedn.d.	-	-	-	-	-	-	-	-	-	-	+/-	+/-	-	-	-	-	-	-	-	-	-	+/-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

API® zym:

Note that the displayed test results represent raw data and therefore may deviate!

	API ID	Control	2-naphthyl phosphateAlkaline phosphatase	2-naphthyl butyrateEsterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	2-naphthyl myristateLipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	N-benzoyl-DL-arginine-2-naphthylamideTrypsin	N-glutaryl-phenylalanine-2-naphthylamidealpha- Chymotrypsin	2-naphthyl phosphateAcid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	6-Br-2-naphthyl-alphaD-galactpyranosidealpha- Galactosidase	2-naphthyl-betaD-galactpyranosidebeta- Galactosidase	Naphthol-AS-BI-betaD-glucuronidebeta- Glucuronidase	2-naphthyl-alphaD-glucopyranosidealpha- Glucosidase	6-Br-2-naphthyl-betaD-glucopyranosidebeta- Glucosidase	1-naphthyl-N-acetyl-betaD-glucosaminideN-acetyl-beta- glucosaminidase	6-Br-2-naphthyl-alphaD-mannopyranosidealpha- Mannosidase	2-naphthyl-alphaL-fucopyranosidealpha- Fucosidase
[Ref.: #116360]	7291	-	+	+	-	-	-	-	-	-	-	+	+	-	-	-	-	-	-	-	-

	Pathway	Enzyme coverage	Annotated reactions
	Pathway annotation	Computationally determined by
[Ref.: #66794]	cis-vaccenate biosynthesis	100	2 of 2
[Ref.: #66794]	CDP-diacylglycerol biosynthesis	100	2 of 2
[Ref.: #66794]	UDP-GlcNAc biosynthesis	100	3 of 3
[Ref.: #66794]	coenzyme A metabolism	100	4 of 4
[Ref.: #66794]	acetate fermentation	100	4 of 4
[Ref.: #66794]	folate polyglutamylation	100	1 of 1
[Ref.: #66794]	anapleurotic synthesis of oxalacetate	100	1 of 1
[Ref.: #66794]	teichoic acid biosynthesis	100	1 of 1
[Ref.: #66794]	aspartate and asparagine metabolism	88.89	8 of 9
[Ref.: #66794]	peptidoglycan biosynthesis	86.67	13 of 15
[Ref.: #66794]	palmitate biosynthesis	81.82	18 of 22
[Ref.: #66794]	ppGpp biosynthesis	75	3 of 4
[Ref.: #66794]	pentose phosphate pathway	72.73	8 of 11
[Ref.: #66794]	cardiolipin biosynthesis	71.43	5 of 7
[Ref.: #66794]	photosynthesis	71.43	10 of 14
[Ref.: #66794]	starch degradation	70	7 of 10
[Ref.: #66794]	vitamin B1 metabolism	69.23	9 of 13
[Ref.: #66794]	acetoin degradation	66.67	2 of 3
[Ref.: #66794]	formaldehyde oxidation	66.67	2 of 3
[Ref.: #66794]	glycolysis	64.71	11 of 17
[Ref.: #66794]	C4 and CAM-carbon fixation	62.5	5 of 8
[Ref.: #66794]	ketogluconate metabolism	62.5	5 of 8
[Ref.: #66794]	phenylalanine metabolism	61.54	8 of 13
[Ref.: #66794]	NAD metabolism	61.11	11 of 18
[Ref.: #66794]	methylglyoxal degradation	60	3 of 5
[Ref.: #66794]	cellulose degradation	60	3 of 5
[Ref.: #66794]	glycogen metabolism	60	3 of 5
[Ref.: #66794]	vitamin K metabolism	60	3 of 5
[Ref.: #66794]	propanol degradation	57.14	4 of 7
[Ref.: #66794]	oxidative phosphorylation	56.04	51 of 91
[Ref.: #66794]	valine metabolism	55.56	5 of 9
[Ref.: #66794]	pyrimidine metabolism	53.33	24 of 45
[Ref.: #66794]	purine metabolism	51.06	48 of 94
[Ref.: #66794]	butanoate fermentation	50	2 of 4
[Ref.: #66794]	dolichol and dolichyl phosphate biosynthesis	50	1 of 2
[Ref.: #66794]	phenylmercury acetate degradation	50	1 of 2
[Ref.: #66794]	glycogen biosynthesis	50	2 of 4
[Ref.: #66794]	dTDPLrhamnose biosynthesis	50	4 of 8
[Ref.: #66794]	gluconeogenesis	50	4 of 8
[Ref.: #66794]	sulfopterin metabolism	50	2 of 4
[Ref.: #66794]	threonine metabolism	50	5 of 10
[Ref.: #66794]	ribulose monophosphate pathway	50	1 of 2
[Ref.: #66794]	glycolate and glyoxylate degradation	50	3 of 6
[Ref.: #66794]	ethanol fermentation	50	1 of 2
[Ref.: #66794]	non-pathway related	47.37	18 of 38
[Ref.: #66794]	glutamate and glutamine metabolism	46.43	13 of 28
[Ref.: #66794]	methionine metabolism	46.15	12 of 26
[Ref.: #66794]	d-xylose degradation	45.45	5 of 11
[Ref.: #66794]	d-mannose degradation	44.44	4 of 9
[Ref.: #66794]	serine metabolism	44.44	4 of 9
[Ref.: #66794]	mevalonate metabolism	42.86	3 of 7
[Ref.: #66794]	glutathione metabolism	42.86	6 of 14
[Ref.: #66794]	ubiquinone biosynthesis	42.86	3 of 7
[Ref.: #66794]	lysine metabolism	40.48	17 of 42
[Ref.: #66794]	3-chlorocatechol degradation	40	2 of 5
[Ref.: #66794]	arachidonate biosynthesis	40	2 of 5
[Ref.: #66794]	metabolism of amino sugars and derivatives	40	2 of 5
[Ref.: #66794]	lipoate biosynthesis	40	2 of 5
[Ref.: #66794]	6-hydroxymethyl-dihydropterin diphosphate biosynthesis	37.5	3 of 8
[Ref.: #66794]	isoleucine metabolism	37.5	3 of 8
[Ref.: #66794]	metabolism of disaccharids	36.36	4 of 11
[Ref.: #66794]	degradation of pentoses	35.71	10 of 28
[Ref.: #66794]	tetrahydrofolate metabolism	35.71	5 of 14
[Ref.: #66794]	isoprenoid biosynthesis	34.62	9 of 26
[Ref.: #66794]	alanine metabolism	34.48	10 of 29
[Ref.: #66794]	arginine metabolism	33.33	8 of 24
[Ref.: #66794]	degradation of hexoses	33.33	6 of 18
[Ref.: #66794]	flavin biosynthesis	33.33	5 of 15
[Ref.: #66794]	lipid A biosynthesis	33.33	3 of 9
[Ref.: #66794]	octane oxidation	33.33	1 of 3
[Ref.: #66794]	L-lactaldehyde degradation	33.33	1 of 3
[Ref.: #66794]	degradation of aromatic, nitrogen containing compounds	33.33	4 of 12
[Ref.: #66794]	acetyl CoA biosynthesis	33.33	1 of 3
[Ref.: #66794]	IAA biosynthesis	33.33	1 of 3
[Ref.: #66794]	sphingosine metabolism	33.33	2 of 6
[Ref.: #66794]	selenocysteine biosynthesis	33.33	2 of 6
[Ref.: #66794]	cysteine metabolism	33.33	6 of 18
[Ref.: #66794]	degradation of sugar alcohols	31.25	5 of 16
[Ref.: #66794]	leucine metabolism	30.77	4 of 13
[Ref.: #66794]	sulfate reduction	30.77	4 of 13
[Ref.: #66794]	Entner Doudoroff pathway	30	3 of 10
[Ref.: #66794]	glycine metabolism	30	3 of 10
[Ref.: #66794]	myo-inositol biosynthesis	30	3 of 10
[Ref.: #66794]	lipid metabolism	29.03	9 of 31
[Ref.: #66794]	reductive acetyl coenzyme A pathway	28.57	2 of 7
[Ref.: #66794]	proline metabolism	27.27	3 of 11
[Ref.: #66794]	lactate fermentation	25	1 of 4
[Ref.: #66794]	androgen and estrogen metabolism	25	4 of 16
[Ref.: #66794]	cyclohexanol degradation	25	1 of 4
[Ref.: #66794]	carnitine metabolism	25	2 of 8
[Ref.: #66794]	tryptophan metabolism	23.68	9 of 38
[Ref.: #66794]	urea cycle	23.08	3 of 13
[Ref.: #66794]	ascorbate metabolism	22.73	5 of 22
[Ref.: #66794]	nitrate assimilation	22.22	2 of 9
[Ref.: #66794]	chorismate metabolism	22.22	2 of 9
[Ref.: #66794]	CO2 fixation in Crenarchaeota	22.22	2 of 9
[Ref.: #66794]	citric acid cycle	21.43	3 of 14
[Ref.: #66794]	tyrosine metabolism	21.43	3 of 14
[Ref.: #66794]	vitamin B12 metabolism	20.59	7 of 34
		Only first 10 entries are displayed. Click here to see all.

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #8763]	Sample type/isolated from	swine waste-corn fermentation

[Ref.: #49931]	Sample type/isolated from	Swine waste-corn fermentation

[Ref.: #67770]	Sample type/isolated from	Swine waste-corn fermentation

[Ref.: #116360]	Sample type/isolated from	Environment, Swine, waste-corn fermentation
* marker position based on {}

Isolation sources categories

#Engineered	#Waste	-
#Host	#Mammals	#Suidae (Pig,Swine)

What are isolation sources categories?

[Ref.: #69479]

Global distribution of 16S sequence LC145552 (>99% sequence identity) for Amylolactobacillus from Microbeatlas

Aquatic Samples	136
Soil Samples	122
Animal Samples	1297
Plant Samples	69
Total Samples	1624

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #8763]	Biosafety level	1	Risk group (German classification) According to TRBA 466
[Ref.: #116360]	Biosafety level	1	Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Lactobacillus amylophilus gene for 16S ribosomal RNA, partial sequence, strain: JCM 1125	LC145552	1459	GenBank ENA	1423721 tax ID
[Ref.: #20218]	Lactobacillus amylophilus partial 16S rRNA gene, type strain CIP 102988T	HE573913	1530	GenBank ENA	1603 tax ID	*
[Ref.: #20218]	Lactobacillus amylophilus strain DSM 20533 16S ribosomal RNA gene, partial sequence	M58806	1516	GenBank ENA	1603 tax ID	*
[Ref.: #20218]	Lactobacillus amylophilus gene for 16S rRNA, partial sequence, strain: JCM 1125	AB289028	688	GenBank ENA	1423721 tax ID	*
[Ref.: #20218]	Lactobacillus amylophilus gene for 16S ribosomal RNA, partial sequence	D31678	178	GenBank ENA	1423721 tax ID	*
[Ref.: #20218]	Lactobacillus amylophilus gene for 16S rRNA, partial sequence, strain: NBRC 15881	AB680988	1499	GenBank ENA	1603 tax ID	*

Genome sequence information:

Only first 5 entries are displayed. Click here to see all.

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Amylolactobacillus amylophilus DSM 20533 = JCM 1125	GCA_001436185	scaffold	GenBank ENA	1423721 tax ID
[Ref.: #67770]	Amylolactobacillus amylophilus DSM 20533 = JCM 1125	GCA_001311665	contig	GenBank ENA	1423721 tax ID
[Ref.: #67770]	Amylolactobacillus amylophilus NBRC 15881	GCA_006540265	contig	GenBank ENA	1603 tax ID
[Ref.: #66792]	Lactobacillus amylophilus DSM 20533 = JCM 1125	1423721.7	complete	PATRIC	1423721 tax ID	*
[Ref.: #66792]	Lactobacillus amylophilus strain NBRC 15881	1603.4	wgs	PATRIC	1603 tax ID	*
[Ref.: #66792]	Amylolactobacillus amylophilus DSM 20533	2721755795	complete	JGI IMG/M	1423721 tax ID	*

[Ref.: #8763]	GC-content	45.5 mol%
[Ref.: #67770]	GC-content	45.5 mol%	thermal denaturation, midpoint method (Tm)
[Ref.: #67770]	GC-content	43.6 mol%	genome sequence analysis

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Amylolactobacillus amylophilus DSM 20533 = JCM 1125 DSM 20533 NCBI: GCA_001936335.1
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	100	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Amylolactobacillus amylophilus DSM 20533 = JCM 1125 DSM 20533 NCBI: GCA_001936335.1
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	95.19	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	no	85.331	yes
[Ref.: #69480]	aerobic	aerobicⓘ	no	95.692	yes
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	88.267	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	96	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	no	90.833	no

Availability in culture collections External links

[Ref.: #8763]

Culture collection no.

CCUG 30137, NCIMB 11546, JCM 1125, DSM 20533, ATCC 49845, LMG 6900, NRRL B-4437, VKM B-2234, BCRC 14055, CCM 7001, CECT 4133, CGMCC 1.3394, CIP 102988, IFO 15881, KCTC 3161, NBRC 15881, NCAIM B.01457, NCFB 2503, NRRL B-4476, VTT E-95574, NCDO 2503

[Ref.: #75884]	SI-ID 3208	*
[Ref.: #75885]	SI-ID 312264	*

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Reclassification of Lactobacillus amylophilus LMG 11400 and NRRL B-4435 as Lactobacillus amylotrophicus sp. nov.	Naser SM, Vancanneyt M, Snauwaert C, Vrancken G, Hoste B, De Vuyst L, Swings J	Int J Syst Evol Microbiol	10.1099/ijs.0.64463-0	2006	*

References

#8763

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 20533

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#20218

Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )

#40497 ; Curators of the CIP;
#49931 Culture Collection University of Gothenburg (CCUG) ; Curators of the CCUG; CCUG 30137

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#66794

Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg: BRENDA, the ELIXIR core data resource in 2021: new developments and updates. Nucleic Acids Res. 49: D498 - D508 2020 ( DOI 10.1093/nar/gkaa1025 , PubMed 33211880 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#68371

Automatically annotated from API 50CH acid .

#68382

Automatically annotated from API zym .

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#75884

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID3208.1 )

#75885

#116360 Collection of Institut Pasteur ; Curators of the CIP; CIP 102988
* These data were automatically processed and therefore are not curated

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Amylolactobacillus amylophilus DSM 20533 = JCM 1125 DSM 20533

Amylolactobacillus amylophilus DSM 20533 = JCM 1125 DSM 20533

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